RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C YMR134WP40207 237 aa1.31□□□□□ -2.2
VPS55YJR044C YIL029CP40538 142 aa1.31□□□□□ -2.2
VPS55YJR044C WWM1P43582 211 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C NCA3P46955 337 aa1.31□□□□□ -2.2
VPS55YJR044C COX16P47081 118 aa1.31□□□□□ -2.2
VPS55YJR044C AVT4P50944 713 aa1.31□□□□□ -2.2
VPS55YJR044C PMT5P52867 743 aa1.31□□□□□ -2.2
VPS55YJR044C TAF6P53040 516 aa1.31□□□□□ -2.2
VPS55YJR044C SDT1P53078 280 aa1.31□□□□□ -2.2
VPS55YJR044C YGL039WP53183 348 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C LSB1P53281 241 aa1.31□□□□□ -2.2
VPS55YJR044C GOR1P53839 350 aa1.31□□□□□ -2.2
VPS55YJR044C GIM3P53900 129 aa1.31□□□□□ -2.2
VPS55YJR044C YNL134CP53912 376 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C SPP2Q02521 185 aa1.31□□□□□ -2.2
VPS55YJR044C YPL080CQ02826 108 aa1.31□□□□□ -2.2
VPS55YJR044C PRM6Q04705 352 aa1.31□□□□□ -2.2
VPS55YJR044C STE23Q06010 1027 aa1.31□□□□□ -2.2
VPS55YJR044C PBP4Q07362 185 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C TSR1Q07381 788 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C LOT6Q07923 191 aa1.31□□□□□ -2.2
VPS55YJR044C SRL2Q12020 392 aa1.31□□□□□ -2.2
VPS55YJR044C POM33Q12164 279 aa1.31□□□□□ -2.2
VPS55YJR044C RRP42Q12277 265 aaPredicted RBP1.31□□□□□ -2.2
VPS55YJR044C EAF3Q12432 401 aa1.31□□□□□ -2.2
VPS55YJR044C PAA1Q12447 191 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C PCL9Q12477 304 aa1.31□□□□□ -2.2
VPS55YJR044C RRP12Q12754 1228 aaKnown RBP1.31□□□□□ -2.2
VPS55YJR044C RAD3P06839 778 aa1.3□□□□□ -2.2
VPS55YJR044C CAP2P13517 287 aa1.3□□□□□ -2.2
VPS55YJR044C CTA1P15202 515 aa1.3□□□□□ -2.2
VPS55YJR044C ERD1P16151 362 aa1.3□□□□□ -2.2
VPS55YJR044C EXG1P23776 448 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C RPL16AP26784 199 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C ACB1P31787 87 aa1.3□□□□□ -2.2
VPS55YJR044C DPH5P32469 300 aaPredicted RBP1.3□□□□□ -2.2
VPS55YJR044C CYM1P32898 989 aa1.3□□□□□ -2.2
VPS55YJR044C CBF5P33322 483 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
VPS55YJR044C YKL097CP34245 136 aa1.3□□□□□ -2.2
VPS55YJR044C YHR122WP38829 231 aa1.3□□□□□ -2.2
VPS55YJR044C MST28P39552 234 aa1.3□□□□□ -2.2
VPS55YJR044C HAC1P41546 238 aa1.3□□□□□ -2.2
VPS55YJR044C KEG1P43614 200 aa1.3□□□□□ -2.2
VPS55YJR044C YJL118WP47022 219 aa1.3□□□□□ -2.2
VPS55YJR044C TRF5P48561 642 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C NAS6P50086 228 aa1.3□□□□□ -2.2
VPS55YJR044C SEH1P53011 349 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C LST7P53237 242 aa1.3□□□□□ -2.2
VPS55YJR044C PXR1P53335 271 aaPredicted RBP1.3□□□□□ -2.2
VPS55YJR044C IBD2P53892 351 aa1.3□□□□□ -2.2
VPS55YJR044C YLR152CP54072 576 aa1.3□□□□□ -2.2
VPS55YJR044C NUP116Q02630 1113 aa1.3□□□□□ -2.2
VPS55YJR044C IRC4Q03036 179 aa1.3□□□□□ -2.2
VPS55YJR044C YMR102CQ03177 834 aa1.3□□□□□ -2.2
VPS55YJR044C YMR181CQ03231 154 aa1.3□□□□□ -2.2
VPS55YJR044C YDR209CQ03480 137 aa1.3□□□□□ -2.2
VPS55YJR044C ADH6Q04894 360 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C RTN1Q04947 295 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C BCH1Q05029 724 aa1.3□□□□□ -2.2
VPS55YJR044C BNA5Q05979 453 aa1.3□□□□□ -2.2
VPS55YJR044C SNT309Q06091 175 aaPredicted RBP1.3□□□□□ -2.2
VPS55YJR044C BER1Q06688 274 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C ERV2Q12284 196 aa1.3□□□□□ -2.2
VPS55YJR044C HRT3Q12347 344 aa1.3□□□□□ -2.2
VPS55YJR044C PRP46Q12417 451 aaPredicted RBP1.3□□□□□ -2.2
VPS55YJR044C AIM45Q12480 344 aaKnown RBP1.3□□□□□ -2.2
VPS55YJR044C IZH4Q99393 312 aa1.3□□□□□ -2.2
VPS55YJR044C PAB1P04147 577 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2 RIP-Chip
VPS55YJR044C SPT15P13393 240 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C MER1P16523 270 aa1.29□□□□□ -2.2
VPS55YJR044C DAL82P21705 255 aa1.29□□□□□ -2.2
VPS55YJR044C RPL16BP26785 198 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C INO2P26798 304 aa1.29□□□□□ -2.2
VPS55YJR044C PPA2P28239 310 aa1.29□□□□□ -2.2
VPS55YJR044C KRE6P32486 720 aa1.29□□□□□ -2.2
VPS55YJR044C KAR9P32526 644 aa1.29□□□□□ -2.2
VPS55YJR044C DOA4P32571 926 aa1.29□□□□□ -2.2
VPS55YJR044C PRS1P32895 427 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C VAM7P32912 316 aa1.29□□□□□ -2.2
VPS55YJR044C MRPS5P33759 307 aa1.29□□□□□ -2.2
VPS55YJR044C TIR2P33890 251 aa1.29□□□□□ -2.2
VPS55YJR044C YKT6P36015 200 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C CAB3P36076 571 aa1.29□□□□□ -2.2
VPS55YJR044C AIM10P39965 576 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C ALD5P40047 520 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C LCP5P40079 357 aaPredicted RBP1.29□□□□□ -2.2
VPS55YJR044C RTR1P40084 226 aaPredicted RBP1.29□□□□□ -2.2
VPS55YJR044C FMC1P40491 155 aa1.29□□□□□ -2.2
VPS55YJR044C YIL067CP40514 678 aa1.29□□□□□ -2.2
VPS55YJR044C OST1P41543 476 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C GCD10P41814 478 aa1.29□□□□□ -2.2
VPS55YJR044C LOC1P43586 204 aaPredicted RBP1.29□□□□□ -2.2
VPS55YJR044C HIT1P46973 164 aa1.29□□□□□ -2.2
VPS55YJR044C LCB3P47013 409 aa1.29□□□□□ -2.2
VPS55YJR044C MTQ1P53944 314 aa1.29□□□□□ -2.2
VPS55YJR044C HXT11P54862 567 aa1.29□□□□□ -2.2
VPS55YJR044C SED5Q01590 340 aa1.29□□□□□ -2.2
VPS55YJR044C RNY1Q02933 434 aaKnown RBP1.29□□□□□ -2.2
VPS55YJR044C UBX2Q04228 584 aa1.29□□□□□ -2.2
VPS55YJR044C GMC2Q06201 188 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms