RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	RPT5	P33297	434 aa	Known RBP	3.06	□□□□□ -1.92
PMI40	YER003C	TPO5	P36029	618 aa		3.06	□□□□□ -1.92
PMI40	YER003C	RCY1	P39531	840 aa		3.06	□□□□□ -1.92
PMI40	YER003C	DSE1	P40077	573 aa		3.06	□□□□□ -1.92
PMI40	YER003C	LSG1	P53145	640 aa	Known RBP	3.06	□□□□□ -1.92
PMI40	YER003C	MST27	P53176	234 aa		3.06	□□□□□ -1.92
PMI40	YER003C	CLD1	P53264	445 aa		3.06	□□□□□ -1.92
PMI40	YER003C	CWC22	P53333	577 aa	Known RBP	3.06	□□□□□ -1.92
PMI40	YER003C	YMR010W	Q03687	405 aa		3.06	□□□□□ -1.92
PMI40	YER003C	YMR027W	Q04371	470 aa		3.06	□□□□□ -1.92
PMI40	YER003C	PBA1	Q05778	276 aa		3.06	□□□□□ -1.92
PMI40	YER003C	YLL007C	Q07799	665 aa		3.06	□□□□□ -1.92
PMI40	YER003C	NDD1	Q08887	554 aa		3.06	□□□□□ -1.92
PMI40	YER003C	YOR387C	Q08910	206 aa		3.06	□□□□□ -1.92
PMI40	YER003C	YDL109C	Q12103	647 aa		3.06	□□□□□ -1.92
PMI40	YER003C	TIP41	Q12199	356 aa		3.06	□□□□□ -1.92
PMI40	YER003C	YDL199C	Q12407	687 aa		3.06	□□□□□ -1.92
PMI40	YER003C	RAD7	P06779	565 aa		3.05	□□□□□ -1.92
PMI40	YER003C	RPS8A	P0CX39	200 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	RPS8B	P0CX40	200 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	RPS18A	P0CX55	146 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	RPS18B	P0CX56	146 aa	Predicted RBP	3.05	□□□□□ -1.92
PMI40	YER003C	SPT15	P13393	240 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	CSM1	P25651	190 aa		3.05	□□□□□ -1.92
PMI40	YER003C	COT1	P32798	439 aa		3.05	□□□□□ -1.92
PMI40	YER003C	HIS2	P38635	335 aa		3.05	□□□□□ -1.92
PMI40	YER003C	SMF2	P38778	549 aa		3.05	□□□□□ -1.92
PMI40	YER003C	SCC4	P40090	624 aa		3.05	□□□□□ -1.92
PMI40	YER003C	REE1	P40893	198 aa		3.05	□□□□□ -1.92
PMI40	YER003C	YFL040W	P43562	540 aa		3.05	□□□□□ -1.92
PMI40	YER003C	YJR085C	P47131	105 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	KEL2	P50090	882 aa		3.05	□□□□□ -1.92
PMI40	YER003C	REX2	P54964	269 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	RNH1	Q04740	348 aa		3.05	□□□□□ -1.92
PMI40	YER003C	CMS1	Q07897	291 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	RLP24	Q07915	199 aa	Known RBP	3.05	□□□□□ -1.92
PMI40	YER003C	TMS1	Q12116	473 aa		3.05	□□□□□ -1.92
PMI40	YER003C	RPL23A	P0CX41	137 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	RPL23B	P0CX42	137 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	NAM2	P11325	894 aa		3.04	□□□□□ -1.92
PMI40	YER003C	UNG1	P12887	359 aa		3.04	□□□□□ -1.92
PMI40	YER003C	FRS2	P15625	503 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	CHA1	P25379	360 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	ARO2	P28777	376 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	MEI5	P32489	222 aa		3.04	□□□□□ -1.92
PMI40	YER003C	SPR1	P32603	445 aa		3.04	□□□□□ -1.92
PMI40	YER003C	YBL059W	P34224	193 aa		3.04	□□□□□ -1.92
PMI40	YER003C	COY1	P34237	679 aa		3.04	□□□□□ -1.92
PMI40	YER003C	YHR035W	P38769	630 aa		3.04	□□□□□ -1.92
PMI40	YER003C	CTM1	P38818	585 aa		3.04	□□□□□ -1.92
PMI40	YER003C	LSM12	P38828	187 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	NDT80	P38830	627 aa		3.04	□□□□□ -1.92
PMI40	YER003C	PTH1	P38876	190 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	DFG10	P40526	253 aa		3.04	□□□□□ -1.92
PMI40	YER003C	YNL320W	P42840	284 aa		3.04	□□□□□ -1.92
PMI40	YER003C	AGX1	P43567	385 aa		3.04	□□□□□ -1.92
PMI40	YER003C	FMP33	P46998	180 aa		3.04	□□□□□ -1.92
PMI40	YER003C	HCH1	P53834	153 aa		3.04	□□□□□ -1.92
PMI40	YER003C	ELP3	Q02908	557 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	IRC4	Q03036	179 aa		3.04	□□□□□ -1.92
PMI40	YER003C	TRM82	Q03774	444 aa		3.04	□□□□□ -1.92
PMI40	YER003C	RIF2	Q06208	395 aa		3.04	□□□□□ -1.92
PMI40	YER003C	PBP4	Q07362	185 aa	Known RBP	3.04	□□□□□ -1.92
PMI40	YER003C	SLM3	Q12093	417 aa		3.04	□□□□□ -1.92
PMI40	YER003C	JID1	Q12350	301 aa		3.04	□□□□□ -1.92
PMI40	YER003C	RPN6	Q12377	434 aa		3.04	□□□□□ -1.92
PMI40	YER003C	PRP46	Q12417	451 aa	Predicted RBP	3.04	□□□□□ -1.92
PMI40	YER003C	RSR1	P13856	272 aa		3.03	□□□□□ -1.92
PMI40	YER003C	DAL2	P25335	343 aa		3.03	□□□□□ -1.92
PMI40	YER003C	ZRT1	P32804	376 aa		3.03	□□□□□ -1.92
PMI40	YER003C	CSE2	P33308	149 aa		3.03	□□□□□ -1.92
PMI40	YER003C	ANR2	P36090	516 aa	Predicted RBP	3.03	□□□□□ -1.92
PMI40	YER003C	SWD2	P36104	329 aa	Predicted RBP	3.03	□□□□□ -1.92
PMI40	YER003C	FMP46	P36141	133 aa	Known RBP	3.03	□□□□□ -1.92
PMI40	YER003C	DTR1	P38125	572 aa		3.03	□□□□□ -1.92
PMI40	YER003C	RCK2	P38623	610 aa		3.03	□□□□□ -1.92
PMI40	YER003C	PTI1	P39927	425 aa	Predicted RBP	3.03	□□□□□ -1.92
PMI40	YER003C	MEP2	P41948	499 aa		3.03	□□□□□ -1.92
PMI40	YER003C	YFR057W	P43625	151 aa		3.03	□□□□□ -1.92
PMI40	YER003C	MRX5	P47007	382 aa		3.03	□□□□□ -1.92
PMI40	YER003C	LIA1	P47120	325 aa	Known RBP	3.03	□□□□□ -1.92
PMI40	YER003C	SEH1	P53011	349 aa	Known RBP	3.03	□□□□□ -1.92
PMI40	YER003C	YPL080C	Q02826	108 aa		3.03	□□□□□ -1.92
PMI40	YER003C	GRX3	Q03835	250 aa		3.03	□□□□□ -1.92
PMI40	YER003C	HRI1	Q05905	244 aa	Known RBP	3.03	□□□□□ -1.92
PMI40	YER003C	BER1	Q06688	274 aa	Known RBP	3.03	□□□□□ -1.92
PMI40	YER003C	YLR012C	Q07927	99 aa		3.03	□□□□□ -1.92
PMI40	YER003C	DDC1	Q08949	612 aa		3.03	□□□□□ -1.92
PMI40	YER003C	FRE8	Q12209	686 aa		3.03	□□□□□ -1.92
PMI40	YER003C	HMS1	Q12398	434 aa		3.03	□□□□□ -1.92
PMI40	YER003C	SAL1	D6W196	494 aa		3.02	□□□□□ -1.93
PMI40	YER003C	ATP6	P00854	259 aa		3.02	□□□□□ -1.93
PMI40	YER003C	SKG6	P32900	734 aa	Predicted RBP	3.02	□□□□□ -1.93
PMI40	YER003C	YNL208W	P40159	199 aa	Known RBP	3.02	□□□□□ -1.93
PMI40	YER003C	PAN6	P40459	309 aa		3.02	□□□□□ -1.93
PMI40	YER003C	AGP3	P43548	558 aa		3.02	□□□□□ -1.93
PMI40	YER003C	YGL260W	P53056	76 aa		3.02	□□□□□ -1.93
PMI40	YER003C	KAP114	P53067	1004 aa		3.02	□□□□□ -1.93
PMI40	YER003C	SHY1	P53266	389 aa		3.02	□□□□□ -1.93
PMI40	YER003C	SED5	Q01590	340 aa		3.02	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms