RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C YDL007C-AQ2V2Q0 85 aa9.79□□□□□ -0.84
VPS60YDR486C IRA1P18963 3092 aa9.79□□□□□ -0.84
VPS60YDR486C DPM1P14020 267 aaKnown RBP9.78□□□□□ -0.84
VPS60YDR486C SNC1P31109 117 aa9.78□□□□□ -0.84
VPS60YDR486C VMA6P32366 345 aaKnown RBP9.78□□□□□ -0.84
VPS60YDR486C ARN2P38724 620 aa9.78□□□□□ -0.84
VPS60YDR486C YIL166CP40445 542 aa9.78□□□□□ -0.84
VPS60YDR486C RHO5P53879 331 aaKnown RBP9.78□□□□□ -0.84
VPS60YDR486C RSM10Q03201 203 aa9.78□□□□□ -0.84
VPS60YDR486C EKI1Q03764 534 aa9.78□□□□□ -0.84
VPS60YDR486C ERB1Q04660 807 aaKnown RBP9.78□□□□□ -0.84
VPS60YDR486C EMG1Q06287 252 aaKnown RBP9.78□□□□□ -0.84
VPS60YDR486C GSH2Q08220 491 aa9.78□□□□□ -0.84
VPS60YDR486C AVO1Q08236 1176 aa9.78□□□□□ -0.84
VPS60YDR486C ERD1P16151 362 aa9.77□□□□□ -0.85
VPS60YDR486C YPK2P18961 677 aa9.77□□□□□ -0.85
VPS60YDR486C IDP1P21954 428 aaKnown RBP9.77□□□□□ -0.85
VPS60YDR486C LDB16P25587 256 aa9.77□□□□□ -0.85
VPS60YDR486C CWH43P25618 953 aa9.77□□□□□ -0.85
VPS60YDR486C DHR2P36009 735 aaPredicted RBP9.77□□□□□ -0.85
VPS60YDR486C YKR015CP36111 568 aa9.77□□□□□ -0.85
VPS60YDR486C MTC4P38335 694 aaKnown RBP9.77□□□□□ -0.85
VPS60YDR486C SKN7P38889 622 aa9.77□□□□□ -0.85
VPS60YDR486C HRB1P38922 454 aaKnown RBP RIP-Chip data9.77□□□□□ -0.85not detected
VPS60YDR486C ZRG8P40021 1076 aa9.77□□□□□ -0.85
VPS60YDR486C IRC6P43615 237 aa9.77□□□□□ -0.85
VPS60YDR486C CUZ1P53899 274 aa9.77□□□□□ -0.85
VPS60YDR486C ATG21Q02887 496 aa9.77□□□□□ -0.85
VPS60YDR486C DML1Q03652 475 aa9.77□□□□□ -0.85
VPS60YDR486C OST6Q03723 332 aa9.77□□□□□ -0.85
VPS60YDR486C ARP10Q04549 284 aa9.77□□□□□ -0.85
VPS60YDR486C RNH1Q04740 348 aa9.77□□□□□ -0.85
VPS60YDR486C DCR2Q05924 578 aa9.77□□□□□ -0.85
VPS60YDR486C YPS7Q06325 596 aa9.77□□□□□ -0.85
VPS60YDR486C YPR127WQ06494 345 aa9.77□□□□□ -0.85
VPS60YDR486C CYK3Q07533 885 aa9.77□□□□□ -0.85
VPS60YDR486C ENB1Q08299 606 aa9.77□□□□□ -0.85
VPS60YDR486C RAX1Q08760 435 aa9.77□□□□□ -0.85
VPS60YDR486C MET2P08465 486 aa9.76□□□□□ -0.85
VPS60YDR486C PRP28P23394 588 aa9.76□□□□□ -0.85
VPS60YDR486C SEF1P34228 1148 aa9.76□□□□□ -0.85
VPS60YDR486C MAE1P36013 669 aaKnown RBP9.76□□□□□ -0.85
VPS60YDR486C YJL193WP39542 402 aa9.76□□□□□ -0.85
VPS60YDR486C YTA6P40328 754 aa9.76□□□□□ -0.85
VPS60YDR486C HXT9P40885 567 aa9.76□□□□□ -0.85
VPS60YDR486C IKS1P47042 667 aa9.76□□□□□ -0.85
VPS60YDR486C YGL101WP53144 215 aa9.76□□□□□ -0.85
VPS60YDR486C YNR062CP53748 327 aa9.76□□□□□ -0.85
VPS60YDR486C HXT11P54862 567 aa9.76□□□□□ -0.85
VPS60YDR486C NUP53Q03790 475 aa9.76□□□□□ -0.85
VPS60YDR486C SNT309Q06091 175 aaPredicted RBP9.76□□□□□ -0.85
VPS60YDR486C MCP1Q12106 302 aa9.76□□□□□ -0.85
VPS60YDR486C TAL1P15019 335 aaKnown RBP9.75□□□□□ -0.85
VPS60YDR486C HSP30P25619 332 aa9.75□□□□□ -0.85
VPS60YDR486C RPS5P26783 225 aaKnown RBP9.75□□□□□ -0.85
VPS60YDR486C NAM9P27929 486 aa9.75□□□□□ -0.85
VPS60YDR486C NDC1P32500 655 aa9.75□□□□□ -0.85
VPS60YDR486C YGL015CP33199 130 aa9.75□□□□□ -0.85
VPS60YDR486C JEN1P36035 616 aa9.75□□□□□ -0.85
VPS60YDR486C RPP1P38786 293 aa9.75□□□□□ -0.85
VPS60YDR486C CHL4P38907 458 aa9.75□□□□□ -0.85
VPS60YDR486C GDI1P39958 451 aaKnown RBP9.75□□□□□ -0.85
VPS60YDR486C STB1P42845 420 aa9.75□□□□□ -0.85
VPS60YDR486C IDS2P46958 469 aa9.75□□□□□ -0.85
VPS60YDR486C SNO4Q04902 237 aa9.75□□□□□ -0.85
VPS60YDR486C HSP33Q08914 237 aaKnown RBP9.75□□□□□ -0.85
VPS60YDR486C HSP32Q08992 237 aa9.75□□□□□ -0.85
VPS60YDR486C YDL109CQ12103 647 aa9.75□□□□□ -0.85
VPS60YDR486C TEL1P38110 2787 aa9.75□□□□□ -0.85
VPS60YDR486C CPR3P25719 182 aa9.74□□□□□ -0.85
VPS60YDR486C BAP2P38084 609 aa9.74□□□□□ -0.85
VPS60YDR486C OM14P38325 134 aa9.74□□□□□ -0.85
VPS60YDR486C RIX1P38883 763 aaPredicted RBP9.74□□□□□ -0.85
VPS60YDR486C NQM1P53228 333 aaPredicted RBP9.74□□□□□ -0.85
VPS60YDR486C BUD17P53727 317 aa9.74□□□□□ -0.85
VPS60YDR486C NUP49Q02199 472 aa9.74□□□□□ -0.85
VPS60YDR486C CGI121Q03705 181 aaKnown RBP9.74□□□□□ -0.85
VPS60YDR486C YPQ2Q06328 317 aa9.74□□□□□ -0.85
VPS60YDR486C YLR040CQ07988 224 aa9.74□□□□□ -0.85
VPS60YDR486C RRG7Q08774 242 aaPredicted RBP9.74□□□□□ -0.85
VPS60YDR486C YDL177CQ12257 170 aa9.74□□□□□ -0.85
VPS60YDR486C PNS1Q12412 539 aa9.74□□□□□ -0.85
VPS60YDR486C TOR1P35169 2470 aa9.73□□□□□ -0.85
VPS60YDR486C PRE2P30656 287 aaKnown RBP9.73□□□□□ -0.85
VPS60YDR486C YHR180WP38868 163 aa9.73□□□□□ -0.85
VPS60YDR486C AIM10P39965 576 aaKnown RBP9.73□□□□□ -0.85
VPS60YDR486C PKP1P40530 394 aa9.73□□□□□ -0.85
VPS60YDR486C VNX1P42839 908 aa9.73□□□□□ -0.85
VPS60YDR486C MDE1P47095 244 aa9.73□□□□□ -0.85
VPS60YDR486C PGA1P53896 198 aa9.73□□□□□ -0.85
VPS60YDR486C PRP3Q03338 469 aaPredicted RBP9.73□□□□□ -0.85
VPS60YDR486C YMR087WQ04299 284 aa9.73□□□□□ -0.85
VPS60YDR486C BTS1Q12051 335 aa9.73□□□□□ -0.85
VPS60YDR486C HER1Q12276 1246 aa9.73□□□□□ -0.85
VPS60YDR486C RPP2BP02400 110 aaKnown RBP9.72□□□□□ -0.85
VPS60YDR486C HAP4P14064 554 aa9.72□□□□□ -0.85
VPS60YDR486C RAD51P25454 400 aa9.72□□□□□ -0.85
VPS60YDR486C RPL5P26321 297 aaKnown RBP9.72□□□□□ -0.85
VPS60YDR486C PUP2P32379 260 aa9.72□□□□□ -0.85
VPS60YDR486C YEF1P32622 495 aa9.72□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms