RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	CKB2	P38930	258 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	YIL024C	P40543	189 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	VMA21	P41806	77 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	YFL012W	P43580	148 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	CSN12	P47130	423 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	YPR109W	Q06104	294 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	FRQ1	Q06389	190 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	NBA1	Q08229	501 aa	Known RBP	4.37	□□□□□ -1.71
VHC1	YBR235W	TUM1	Q08686	304 aa	Known RBP	4.37	□□□□□ -1.71
VHC1	YBR235W	HOS1	Q12214	470 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	SUS1	Q6WNK7	96 aa		4.37	□□□□□ -1.71
VHC1	YBR235W	CBP1	P07252	654 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	CKA1	P15790	372 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	GRR1	P24814	1151 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	TVP38	P36164	337 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	PHO90	P39535	881 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	YJR011C	P47086	261 aa	Predicted RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	ECM9	Q02202	377 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	YPL077C	Q02831	240 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	TRS31	Q03337	283 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	RKM2	Q03942	479 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	PUN1	Q06991	263 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	FDH1	Q08911	376 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	NYV1	Q12255	253 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	YDR262W	Q12331	272 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	PST2	Q12335	198 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	MEX67	Q99257	599 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	YOR304C-A	O14468	76 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	CDC36	P06100	191 aa	Predicted RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	IDP1	P21954	428 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	PPH21	P23594	369 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	VBA3	P25594	458 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	YCR102C	P25608	368 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	APE3	P37302	537 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	YBR053C	P38235	358 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	GDI1	P39958	451 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	SMB1	P40018	196 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	QRI7	P43122	407 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	YGR168C	P53293	376 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	MPA43	P53583	542 aa	Predicted RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	SAE3	P89114	91 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	NUP116	Q02630	1113 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	SLD5	Q03406	294 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	PEX30	Q06169	523 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	GPI11	Q06636	219 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	AIM6	Q07716	390 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	HSH49	Q99181	213 aa	Predicted RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	ALG7	P07286	448 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	GUK1	P15454	187 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	SNF5	P18480	905 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	PEX4	P29340	183 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	AFG1	P32317	509 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	MRP20	P32387	263 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	YGL015C	P33199	130 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	YER188W	P40103	239 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	SNM1	P40993	198 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	GLR1	P41921	483 aa	Known RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	YGL114W	P53134	725 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	GND2	P53319	492 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	GIP3	Q03016	1276 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	ATG39	Q06159	398 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	TFC7	Q12415	435 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	MRX4	Q12467	430 aa		4.36	□□□□□ -1.71
VHC1	YBR235W	PFK27	Q12471	397 aa	Predicted RBP	4.36	□□□□□ -1.71
VHC1	YBR235W	ADH7	P25377	361 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	PER1	P25625	357 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	HOG1	P32485	435 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	YUH1	P35127	236 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	VBA5	P36172	582 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	BNA4	P38169	460 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	BUR6	P40096	142 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	LSB3	P43603	459 aa	Known RBP	4.35	□□□□□ -1.71
VHC1	YBR235W	YJR012C	P47087	207 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	SGF73	P53165	657 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	RHO3	Q00245	231 aa	Known RBP	4.35	□□□□□ -1.71
VHC1	YBR235W	YDR132C	Q03900	495 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	UPS3	Q04006	179 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	YLR271W	Q06152	274 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	YTM1	Q12024	460 aa	Predicted RBP	4.35	□□□□□ -1.71
VHC1	YBR235W	YPL245W	Q12179	454 aa	Known RBP	4.35	□□□□□ -1.71
VHC1	YBR235W	SLH1	P53327	1967 aa	Known RBP	4.35	□□□□□ -1.71
VHC1	YBR235W	YLR358C	O13565	187 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	SUC2	P00724	532 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	YOL163W	P0CF20	169 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	UNG1	P12887	359 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	SAT4	P25333	603 aa	Known RBP	4.35	□□□□□ -1.71
VHC1	YBR235W	AGP1	P25376	633 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	YCR087C-A	P37263	153 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	DTR1	P38125	572 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	PUG1	P40100	303 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	RMD8	P43620	662 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	PHO86	P46956	311 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	SSY5	P47002	699 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	DAN1	P47178	298 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	GUP1	P53154	560 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	YGR017W	P53210	297 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	YGR126W	P53274	230 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	SMA1	Q02651	245 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	SPC19	Q03954	165 aa		4.35	□□□□□ -1.71
VHC1	YBR235W	CTK1	Q03957	528 aa	Known RBP	4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms