RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W NUP116Q02630 1113 aa2.07□□□□□ -2.08
NUP170YBL079W YPL108WQ02872 168 aaPredicted RBP2.07□□□□□ -2.08
NUP170YBL079W RCE1Q03530 315 aa2.07□□□□□ -2.08
NUP170YBL079W RAD34Q06665 692 aa2.07□□□□□ -2.08
NUP170YBL079W FCY22Q12119 530 aa2.07□□□□□ -2.08
NUP170YBL079W BMT6Q12291 365 aa2.07□□□□□ -2.08
NUP170YBL079W RPN6Q12377 434 aa2.07□□□□□ -2.08
NUP170YBL079W TMA17Q12513 150 aa2.07□□□□□ -2.08
NUP170YBL079W NOT5Q12514 560 aaPredicted RBP2.07□□□□□ -2.08
NUP170YBL079W PDE2P06776 526 aa2.07□□□□□ -2.08
NUP170YBL079W BGL2P15703 313 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W FEN2P25621 512 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W ARE1P25628 610 aa2.07□□□□□ -2.08
NUP170YBL079W BUB2P26448 306 aaPredicted RBP2.07□□□□□ -2.08
NUP170YBL079W SBA1P28707 216 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W CAM1P29547 415 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W ACP1P32463 125 aa2.07□□□□□ -2.08
NUP170YBL079W PTM1P32857 523 aa2.07□□□□□ -2.08
NUP170YBL079W SOF1P33750 489 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W SOR1P35497 357 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W LEM3P42838 414 aa2.07□□□□□ -2.08
NUP170YBL079W CIN2P46670 268 aa2.07□□□□□ -2.08
NUP170YBL079W XPT1P47165 209 aa2.07□□□□□ -2.08
NUP170YBL079W DIA3P52290 468 aa2.07□□□□□ -2.08
NUP170YBL079W RIM8P53179 542 aa2.07□□□□□ -2.08
NUP170YBL079W MTL1P53214 551 aa2.07□□□□□ -2.08
NUP170YBL079W ATG4P53867 494 aa2.07□□□□□ -2.08
NUP170YBL079W NOG1Q02892 647 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W YDC1Q02896 317 aa2.07□□□□□ -2.08
NUP170YBL079W YDR124WQ04608 324 aa2.07□□□□□ -2.08
NUP170YBL079W DBP9Q06218 594 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W IPK1Q06667 281 aa2.07□□□□□ -2.08
NUP170YBL079W SOR2Q07786 357 aa2.07□□□□□ -2.08
NUP170YBL079W CHS5Q12114 671 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W YPR022CQ12139 1133 aa2.07□□□□□ -2.08
NUP170YBL079W RMD5Q12508 421 aa2.07□□□□□ -2.08
NUP170YBL079W GDH1P07262 454 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W ILV2P07342 687 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W GPI18P38211 433 aa2.07□□□□□ -2.08
NUP170YBL079W FAT1P38225 669 aa2.07□□□□□ -2.08
NUP170YBL079W MET28P40573 187 aa2.07□□□□□ -2.08
NUP170YBL079W SMK1P41808 388 aa2.07□□□□□ -2.08
NUP170YBL079W RPE1P46969 238 aa2.07□□□□□ -2.08
NUP170YBL079W PRP31P49704 494 aaPredicted RBP2.07□□□□□ -2.08
NUP170YBL079W ERG25P53045 309 aa2.07□□□□□ -2.08
NUP170YBL079W BUD22Q04347 519 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W SWA2Q06677 668 aa2.07□□□□□ -2.08
NUP170YBL079W DIA2Q08496 732 aaPredicted RBP2.07□□□□□ -2.08
NUP170YBL079W UBX3Q12229 455 aa2.07□□□□□ -2.08
NUP170YBL079W MRX4Q12467 430 aa2.07□□□□□ -2.08
NUP170YBL079W TPK2P06245 380 aa2.07□□□□□ -2.08
NUP170YBL079W TRX3P25372 127 aa2.07□□□□□ -2.08
NUP170YBL079W IES6P32617 166 aa2.07□□□□□ -2.08
NUP170YBL079W MRT4P33201 236 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W ECM15P35195 104 aa2.07□□□□□ -2.08
NUP170YBL079W PHO89P38361 574 aa2.07□□□□□ -2.08
NUP170YBL079W SHU2P38957 223 aa2.07□□□□□ -2.08
NUP170YBL079W SHO1P40073 367 aa2.07□□□□□ -2.08
NUP170YBL079W PHB1P40961 287 aa2.07□□□□□ -2.08
NUP170YBL079W FMP32P43557 207 aa2.07□□□□□ -2.08
NUP170YBL079W YIP1P53039 248 aa2.07□□□□□ -2.08
NUP170YBL079W YNR048WP53740 393 aa2.07□□□□□ -2.08
NUP170YBL079W YNR068CP53754 272 aa2.07□□□□□ -2.08
NUP170YBL079W SAM50P53969 484 aa2.07□□□□□ -2.08
NUP170YBL079W SNO4Q04902 237 aa2.07□□□□□ -2.08
NUP170YBL079W PUN1Q06991 263 aa2.07□□□□□ -2.08
NUP170YBL079W IRC25Q07951 179 aa2.07□□□□□ -2.08
NUP170YBL079W HSP33Q08914 237 aaKnown RBP2.07□□□□□ -2.08
NUP170YBL079W HSP32Q08992 237 aa2.07□□□□□ -2.08
NUP170YBL079W NCE102Q12207 173 aaRIP-Chip data2.07□□□□□ -2.08not detected
NUP170YBL079W TPK3P05986 398 aa2.06□□□□□ -2.08
NUP170YBL079W RAD52P06778 471 aaKnown RBP2.06□□□□□ -2.08
NUP170YBL079W HEM13P11353 328 aaKnown RBP2.06□□□□□ -2.08
NUP170YBL079W RAP1P11938 827 aa2.06□□□□□ -2.08
NUP170YBL079W NFS1P25374 497 aa2.06□□□□□ -2.08
NUP170YBL079W CLB6P32943 380 aa2.06□□□□□ -2.08
NUP170YBL079W SHM1P37292 490 aaPredicted RBP2.06□□□□□ -2.08
NUP170YBL079W COS111P38308 924 aa2.06□□□□□ -2.08
NUP170YBL079W SIC1P38634 284 aa2.06□□□□□ -2.08
NUP170YBL079W YLF2P38746 405 aa2.06□□□□□ -2.08
NUP170YBL079W PEP8P40335 379 aa2.06□□□□□ -2.08
NUP170YBL079W TY4A-JP47023 414 aa2.06□□□□□ -2.08
NUP170YBL079W YJL043WP47053 257 aa2.06□□□□□ -2.08
NUP170YBL079W SIP18P50263 79 aa2.06□□□□□ -2.08
NUP170YBL079W GEP7P53171 287 aa2.06□□□□□ -2.08
NUP170YBL079W NRK1P53915 240 aa2.06□□□□□ -2.08
NUP170YBL079W YMR279CQ03263 540 aa2.06□□□□□ -2.08
NUP170YBL079W GIS1Q03833 894 aa2.06□□□□□ -2.08
NUP170YBL079W YDR391CQ04170 232 aa2.06□□□□□ -2.08
NUP170YBL079W YMR254CQ04838 102 aa2.06□□□□□ -2.08
NUP170YBL079W SNT309Q06091 175 aaPredicted RBP2.06□□□□□ -2.08
NUP170YBL079W YPR127WQ06494 345 aa2.06□□□□□ -2.08
NUP170YBL079W VIK1Q12045 647 aa2.06□□□□□ -2.08
NUP170YBL079W IZH2Q12442 317 aa2.06□□□□□ -2.08
NUP170YBL079W FAB1P34756 2278 aa2.06□□□□□ -2.08
NUP170YBL079W RAD10P06838 210 aa2.06□□□□□ -2.08
NUP170YBL079W PHO3P24031 467 aa2.06□□□□□ -2.08
NUP170YBL079W BUD5P25300 642 aaPredicted RBP2.06□□□□□ -2.08
NUP170YBL079W THI4P32318 326 aa2.06□□□□□ -2.08
NUP170YBL079W AIM26P32858 118 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms