RNA–Protein interactions for RNA: YPR040W

TIP41, Transcript of Protein that interacts with Tap42p, which regulates PP2A, yeast

Gene TIP41, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIP41	YPR040W	TIP41	Q12199	356 aa		4.84	□□□□□ -1.63
TIP41	YPR040W	RRP12	Q12754	1228 aa	Known RBP	4.84	□□□□□ -1.63
TIP41	YPR040W	ACC1	Q00955	2233 aa	Known RBP	4.84	□□□□□ -1.64
TIP41	YPR040W	YCL068C	P25593	260 aa		4.83	□□□□□ -1.64
TIP41	YPR040W	MSK1	P32048	576 aa		4.83	□□□□□ -1.64
TIP41	YPR040W	PRO3	P32263	286 aa	Known RBP	4.83	□□□□□ -1.64
TIP41	YPR040W	SIM1	P40472	476 aa		4.83	□□□□□ -1.64
TIP41	YPR040W	YFL067W	P43537	175 aa		4.83	□□□□□ -1.64
TIP41	YPR040W	TOS2	P50078	622 aa		4.83	□□□□□ -1.64
TIP41	YPR040W	ARR1	Q06596	294 aa		4.83	□□□□□ -1.64
TIP41	YPR040W	THP3	Q12049	470 aa	Known RBP	4.83	□□□□□ -1.64
TIP41	YPR040W	CCH1	P50077	2039 aa		4.83	□□□□□ -1.64
TIP41	YPR040W	GDH1	P07262	454 aa	Known RBP	4.82	□□□□□ -1.64
TIP41	YPR040W	SPS22	P25380	463 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	HMX1	P32339	317 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	SKT5	P34226	696 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	CHK1	P38147	527 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	MIX23	P38162	196 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	MTC6	P38849	526 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	YDR089W	P38966	869 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	YJL213W	P40896	331 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	COS10	P52924	374 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	IBD2	P53892	351 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	CSI1	Q04368	295 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	BCH1	Q05029	724 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	YOP1	Q12402	180 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	CEX1	Q12453	761 aa		4.82	□□□□□ -1.64
TIP41	YPR040W	IRA1	P18963	3092 aa		4.81	□□□□□ -1.64
TIP41	YPR040W	BEM2	P39960	2167 aa	Known RBP	4.81	□□□□□ -1.64
TIP41	YPR040W	RPS19A	P07280	144 aa	Known RBP	4.81	□□□□□ -1.64
TIP41	YPR040W	RPS19B	P07281	144 aa	Predicted RBP	4.81	□□□□□ -1.64
TIP41	YPR040W	RNA1	P11745	407 aa	Known RBP	4.81	□□□□□ -1.64
TIP41	YPR040W	HXT2	P23585	541 aa		4.81	□□□□□ -1.64
TIP41	YPR040W	EXG1	P23776	448 aa	Known RBP	4.81	□□□□□ -1.64
TIP41	YPR040W	DBR1	P24309	405 aa	Known RBP	4.81	□□□□□ -1.64
TIP41	YPR040W	RNA14	P25298	677 aa	Known RBP	4.81	□□□□□ -1.64
TIP41	YPR040W	PCH2	P38126	564 aa		4.81	□□□□□ -1.64
TIP41	YPR040W	CRZ1	P53968	678 aa		4.81	□□□□□ -1.64
TIP41	YPR040W	YDL144C	Q07589	356 aa		4.81	□□□□□ -1.64
TIP41	YPR040W	CAP2	P13517	287 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	AGA1	P32323	725 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	MUD1	P32605	298 aa	Known RBP	4.8	□□□□□ -1.64
TIP41	YPR040W	YBR137W	P38276	179 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	YBP1	P38315	674 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	TIF5	P38431	405 aa	Known RBP	4.8	□□□□□ -1.64
TIP41	YPR040W	LIN1	P38852	340 aa	Predicted RBP	4.8	□□□□□ -1.64
TIP41	YPR040W	ALP1	P38971	573 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	NCA3	P46955	337 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	YNL146W	P53906	100 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	AIM33	Q04516	312 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	FSH3	Q99369	266 aa		4.8	□□□□□ -1.64
TIP41	YPR040W	RPC40	P07703	335 aa	Known RBP	4.79	□□□□□ -1.64
TIP41	YPR040W	CLN3	P13365	580 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	YPT53	P36019	220 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	SLX1	P38324	304 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	LYS12	P40495	371 aa	Known RBP	4.79	□□□□□ -1.64
TIP41	YPR040W	WWM1	P43582	211 aa	Known RBP	4.79	□□□□□ -1.64
TIP41	YPR040W	YGL114W	P53134	725 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	RET3	P53600	189 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	VTI1	Q04338	217 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	RAX1	Q08760	435 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	YLR108C	Q12259	485 aa		4.79	□□□□□ -1.64
TIP41	YPR040W	RIF1	P29539	1916 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	GCN1	P33892	2672 aa	Known RBP	4.78	□□□□□ -1.64
TIP41	YPR040W	VPS63	O13549	108 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	SSC1	P0CS90	654 aa	Known RBP	4.78	□□□□□ -1.64
TIP41	YPR040W	HEM15	P16622	393 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	JLP2	P40206	208 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	MOB1	P40484	314 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	YDL186W	P48568	277 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	VPS20	Q04272	221 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	YPR078C	Q06813	372 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	YOR338W	Q99326	363 aa		4.78	□□□□□ -1.64
TIP41	YPR040W	YEF1	P32622	495 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	TMT1	P32643	299 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	YBR139W	P38109	508 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	GEP4	P38812	185 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	VPS45	P38932	577 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	PRP39	P39682	629 aa	Known RBP	4.77	□□□□□ -1.65
TIP41	YPR040W	SPG5	P42933	373 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	YHC3	P47040	408 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	RRN9	P53437	365 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	NDE2	Q07500	545 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	YRM1	Q12340	786 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	ICT1	Q12385	394 aa		4.77	□□□□□ -1.65
TIP41	YPR040W	PFK27	Q12471	397 aa	Predicted RBP	4.77	□□□□□ -1.65
TIP41	YPR040W	YLR422W	Q06409	1932 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	CBP2	P03874	630 aa	Predicted RBP	4.76	□□□□□ -1.65
TIP41	YPR040W	RNR2	P09938	399 aa	Known RBP	4.76	□□□□□ -1.65
TIP41	YPR040W	YLL053C	P0CD98	152 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	GAL3	P13045	520 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	GRR1	P24814	1151 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	TOA2	P32774	122 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	END3	P39013	349 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	SSO2	P39926	295 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	YFR018C	P43599	363 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	LIF1	P53150	421 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	MSO1	P53604	210 aa	Known RBP	4.76	□□□□□ -1.65
TIP41	YPR040W	SMP3	Q04174	516 aa		4.76	□□□□□ -1.65
TIP41	YPR040W	AIM45	Q12480	344 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms