RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	LSM5	P40089	93 aa	Known RBP	2.78	□□□□□ -1.96
ATG3	YNR007C	YPS6	P40583	537 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	YPI1	P43587	155 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	RRT5	P43607	289 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	ASG7	P46993	209 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	YDL186W	P48568	277 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	BTN2	P53286	410 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	BUD32	P53323	261 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	YGR266W	P53326	701 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	SUR7	P54003	302 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	PET117	Q02771	107 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	ADD37	Q03233	198 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	NHP10	Q03435	203 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	YMR155W	Q03795	547 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	ARX1	Q03862	593 aa	Known RBP	2.78	□□□□□ -1.96
ATG3	YNR007C	FMP45	Q07651	309 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	YDR018C	Q12185	396 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	NAG1	Q8TGN9	163 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	LAG2	Q92325	660 aa		2.78	□□□□□ -1.96
ATG3	YNR007C	GDH1	P07262	454 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	RPL1A	P0CX43	217 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	RPL1B	P0CX44	217 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	PDX1	P16451	410 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	SEC62	P21825	274 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	RBK1	P25332	333 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	CIN8	P27895	1000 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	REC114	P32841	428 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	MSN2	P33748	704 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	HCS1	P34243	683 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	SWH1	P35845	1188 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	MRPL4	P36517	319 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	MRPL37	P36532	105 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	CBP4	P37267	147 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	MRP21	P38175	177 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	LDB7	P38210	180 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	OLA1	P38219	394 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	TRM7	P38238	310 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	POP4	P38336	279 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	TCD1	P38756	429 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	CYC2	P38909	366 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	GIM4	P40005	111 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	LCP5	P40079	357 aa	Predicted RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	SCC4	P40090	624 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	YMR134W	P40207	237 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	PAN6	P40459	309 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	SEC28	P40509	296 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	SSU1	P41930	458 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	SPG5	P42933	373 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	GPI1	P53306	609 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	NRM1	P53718	249 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	RHO3	Q00245	231 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	SOV1	Q04748	898 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	RBS1	Q05672	457 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	YLR030W	Q07967	263 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	YPL278C	Q08990	100 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	RIO1	Q12196	484 aa	Known RBP	2.77	□□□□□ -1.97
ATG3	YNR007C	YDR262W	Q12331	272 aa		2.77	□□□□□ -1.97
ATG3	YNR007C	COX5A	P00424	153 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	CAR1	P00812	333 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	RPL15A	P05748	204 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	GPH1	P06738	902 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	IMA3	P0CW40	589 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	IMA4	P0CW41	589 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	GPA2	P10823	449 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	SEC63	P14906	663 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	AMD1	P15274	810 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	GLK1	P17709	500 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	RPB4	P20433	221 aa	Predicted RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	CLN1	P20437	546 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	PPH21	P23594	369 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	SPB1	P25582	841 aa	Predicted RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	SMI1	P32566	505 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	CDC13	P32797	924 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	WSC4	P38739	605 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	SMF2	P38778	549 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	YER034W	P40022	185 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	ALG8	P40351	577 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	ATM1	P40416	690 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	YJL213W	P40896	331 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	ZIM17	P42844	174 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	IKS1	P47042	667 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	YGR149W	P48236	432 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	TRF5	P48561	642 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	OCA1	P50946	238 aa	Predicted RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	EMC4	P53073	190 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	RMD9	P53140	646 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	RPM2	Q02773	1202 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	RPN9	Q04062	393 aa	Known RBP	2.76	□□□□□ -1.97
ATG3	YNR007C	EMI1	Q04406	187 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	VPS74	Q06385	345 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	IMA2	Q08295	589 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	YDL009C	Q12210	107 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	LDB17	Q12342	491 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	YOL159C-A	Q3E769	90 aa		2.76	□□□□□ -1.97
ATG3	YNR007C	HOM3	P10869	527 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	SGV1	P23293	657 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	MRPL25	P23369	157 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	LDB16	P25587	256 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	YCR051W	P25631	222 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	URA10	P30402	227 aa		2.75	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms