RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDP1	YNL039W	CTS2	Q06350	511 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	GAT3	Q07928	141 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	AHC1	Q12433	566 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	CSR2	Q12734	1121 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	DET1	Q99288	334 aa	Known RBP	4.19	□□□□□ -1.74
BDP1	YNL039W	QCR6	P00127	147 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
BDP1	YNL039W	DCC1	P25559	380 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	MKK1	P32490	508 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	PRS1	P32895	427 aa	Known RBP	4.19	□□□□□ -1.74
BDP1	YNL039W	TIR2	P33890	251 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	COS9	P36034	407 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	YHR182W	P38870	785 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	YAR1	P46683	200 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	YJL118W	P47022	219 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	KAP114	P53067	1004 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	OKP1	P53298	406 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	PIR3	Q03180	325 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	ATG38	Q05789	226 aa	Known RBP	4.19	□□□□□ -1.74
BDP1	YNL039W	BSC6	Q08280	497 aa		4.19	□□□□□ -1.74
BDP1	YNL039W	COX2	P00410	251 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	ERG9	P29704	444 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	TMT1	P32643	299 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	PTR2	P32901	601 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	BMH2	P34730	273 aa	Known RBP	4.18	□□□□□ -1.74
BDP1	YNL039W	YHK8	P38776	514 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	FHL1	P39521	936 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	PRM9	P39551	298 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	SHQ1	P40486	507 aa	Predicted RBP	4.18	□□□□□ -1.74
BDP1	YNL039W	MSS2	P40990	351 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	IKS1	P47042	667 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	AIM24	P47127	394 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	COS1	P53822	381 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	RPM2	Q02773	1202 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	CSM3	Q04659	317 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	GMC2	Q06201	188 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	ALE1	Q08548	619 aa		4.18	□□□□□ -1.74
BDP1	YNL039W	PRB1	P09232	635 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	RBK1	P25332	333 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	YCP4	P25349	247 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	CWP1	P28319	239 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	PRO3	P32263	286 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	GCG1	P32656	232 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
BDP1	YNL039W	AIM10	P39965	576 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	ALG8	P40351	577 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	DIM1	P41819	318 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	TRM112	P53738	135 aa	Predicted RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	BER1	Q06688	274 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	SNX3	Q08826	162 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	YLR108C	Q12259	485 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	CFT1	Q06632	1357 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	YFL068W	P0CX99	160 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	YLL066W-A	P0CY00	160 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	YLL067W-A	P0CY01	160 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	YSR3	P23501	404 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	RVS161	P25343	265 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	POP5	P28005	173 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	RIB5	P38145	238 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	YCH1	P42937	148 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	MDV1	P47025	714 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	TRF5	P48561	642 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	SEH1	P53011	349 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	CGR1	P53188	120 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	CAF40	P53829	373 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	PGA2	P53903	129 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	YPR172W	Q06608	200 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	PBP4	Q07362	185 aa	Known RBP	4.17	□□□□□ -1.74
BDP1	YNL039W	ATG31	Q12421	196 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	SET6	Q12529	373 aa		4.17	□□□□□ -1.74
BDP1	YNL039W	RAD3	P06839	778 aa		4.16	□□□□□ -1.74
BDP1	YNL039W	ARG80	P07249	177 aa		4.16	□□□□□ -1.74
BDP1	YNL039W	YCR016W	P25617	290 aa	Known RBP	4.16	□□□□□ -1.74
BDP1	YNL039W	ITR2	P30606	609 aa		4.16	□□□□□ -1.74
BDP1	YNL039W	NDC1	P32500	655 aa		4.16	□□□□□ -1.74
BDP1	YNL039W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
BDP1	YNL039W	YPT35	P38815	214 aa	Known RBP	4.16	□□□□□ -1.74
BDP1	YNL039W	ALD5	P40047	520 aa	Known RBP	4.16	□□□□□ -1.74
BDP1	YNL039W	YIR016W	P40572	265 aa		4.16	□□□□□ -1.74
BDP1	YNL039W	PSA1	P41940	361 aa	Known RBP	4.16	□□□□□ -1.74
BDP1	YNL039W	AGP3	P43548	558 aa		4.16	□□□□□ -1.74
BDP1	YNL039W	YPQ1	Q12010	308 aa		4.16	□□□□□ -1.74
BDP1	YNL039W	MRPL25	P23369	157 aa		4.15	□□□□□ -1.74
BDP1	YNL039W	PHA2	P32452	334 aa		4.15	□□□□□ -1.74
BDP1	YNL039W	TRS65	P32893	560 aa		4.15	□□□□□ -1.74
BDP1	YNL039W	SWD2	P36104	329 aa	Predicted RBP	4.15	□□□□□ -1.74
BDP1	YNL039W	JLP2	P40206	208 aa		4.15	□□□□□ -1.74
BDP1	YNL039W	OTU1	P43558	301 aa		4.15	□□□□□ -1.74
BDP1	YNL039W	YPL080C	Q02826	108 aa		4.15	□□□□□ -1.74
BDP1	YNL039W	MEX67	Q99257	599 aa	Known RBP	4.15	□□□□□ -1.74
BDP1	YNL039W	MTF1	P14908	341 aa	Known RBP	4.14	□□□□□ -1.75
BDP1	YNL039W	KRE6	P32486	720 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	CYM1	P32898	989 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	MIX23	P38162	196 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	YBR137W	P38276	179 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	SLM1	P40485	686 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	YJR030C	P47101	745 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	HXT11	P54862	567 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	SED5	Q01590	340 aa		4.14	□□□□□ -1.75
BDP1	YNL039W	NDE2	Q07500	545 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms