RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRE11	YMR224C	BET4	Q00618	327 aa		4.65	□□□□□ -1.66
MRE11	YMR224C	CCE1	Q03702	353 aa		4.65	□□□□□ -1.66
MRE11	YMR224C	GAT3	Q07928	141 aa		4.65	□□□□□ -1.66
MRE11	YMR224C	RAX1	Q08760	435 aa		4.65	□□□□□ -1.66
MRE11	YMR224C	ATX2	Q12067	313 aa		4.65	□□□□□ -1.66
MRE11	YMR224C	YAP1	P19880	650 aa	Known RBP	4.65	□□□□□ -1.67
MRE11	YMR224C	ILV6	P25605	309 aa	Known RBP	4.65	□□□□□ -1.67
MRE11	YMR224C	YCR016W	P25617	290 aa	Known RBP	4.65	□□□□□ -1.67
MRE11	YMR224C	MKK1	P32490	508 aa		4.65	□□□□□ -1.67
MRE11	YMR224C	CAB3	P36076	571 aa		4.65	□□□□□ -1.67
MRE11	YMR224C	RRP3	P38712	501 aa	Known RBP	4.65	□□□□□ -1.67
MRE11	YMR224C	HAT2	P39984	401 aa		4.65	□□□□□ -1.67
MRE11	YMR224C	KEG1	P43614	200 aa		4.65	□□□□□ -1.67
MRE11	YMR224C	DET1	Q99288	334 aa	Known RBP	4.65	□□□□□ -1.67
MRE11	YMR224C	JIP3	O13555	125 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	PGK1	P00560	416 aa	Known RBP	4.64	□□□□□ -1.67
MRE11	YMR224C	RAD3	P06839	778 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	RVS161	P25343	265 aa	Known RBP	4.64	□□□□□ -1.67
MRE11	YMR224C	DCC1	P25559	380 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	KRE6	P32486	720 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	TMT1	P32643	299 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	GEP4	P38812	185 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	AIM24	P47127	394 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	COS1	P53822	381 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	ALE1	Q08548	619 aa		4.64	□□□□□ -1.67
MRE11	YMR224C	YER190C-B	P0CX94	160 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YEL077W-A	P0CX95	160 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YGR296C-B	P0CX96	160 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YPL283W-B	P0CX97	160 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YPR204C-A	P0CX98	160 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YCR022C	P25620	114 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	CYM1	P32898	989 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	TIR2	P33890	251 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	SIP3	P38717	1229 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	AZF1	P41696	914 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YCH1	P42937	148 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	SEH1	P53011	349 aa	Known RBP	4.63	□□□□□ -1.67
MRE11	YMR224C	ERG13	P54839	491 aa	Known RBP	4.63	□□□□□ -1.67
MRE11	YMR224C	STP1	Q00947	519 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	CSM3	Q04659	317 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YMR254C	Q04838	102 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	RTT103	Q05543	409 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YLR283W	Q05867	314 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	ADH2	P00331	348 aa	Known RBP	4.63	□□□□□ -1.67
MRE11	YMR224C	YSR3	P23501	404 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	ERG9	P29704	444 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	PPZ2	P33329	710 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YHK8	P38776	514 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	SLM1	P40485	686 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	RPL15B	P54780	204 aa	Predicted RBP	4.63	□□□□□ -1.67
MRE11	YMR224C	HXT11	P54862	567 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	YMR181C	Q03231	154 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	GTO3	Q04806	366 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	BCH1	Q05029	724 aa		4.63	□□□□□ -1.67
MRE11	YMR224C	BER1	Q06688	274 aa	Known RBP	4.63	□□□□□ -1.67
MRE11	YMR224C	SAM2	P19358	384 aa	Known RBP	4.62	□□□□□ -1.67
MRE11	YMR224C	POP5	P28005	173 aa		4.62	□□□□□ -1.67
MRE11	YMR224C	YHR182W	P38870	785 aa		4.62	□□□□□ -1.67
MRE11	YMR224C	FHL1	P39521	936 aa		4.62	□□□□□ -1.67
MRE11	YMR224C	AGP3	P43548	558 aa		4.62	□□□□□ -1.67
MRE11	YMR224C	PBP4	Q07362	185 aa	Known RBP	4.62	□□□□□ -1.67
MRE11	YMR224C	TSR1	Q07381	788 aa	Known RBP	4.62	□□□□□ -1.67
MRE11	YMR224C	YOR029W	Q12243	111 aa		4.62	□□□□□ -1.67
MRE11	YMR224C	SET6	Q12529	373 aa		4.62	□□□□□ -1.67
MRE11	YMR224C	SLY1	P22213	666 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	AIM17	P23180	465 aa	Known RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	RBK1	P25332	333 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	YKL071W	P36086	256 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	CHK1	P38147	527 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	YIR014W	P40570	242 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	KTR6	P54070	446 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	MRPS17	Q03246	237 aa	Predicted RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	YMR209C	Q03648	457 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	CMS1	Q07897	291 aa	Known RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	YPQ1	Q12010	308 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	YLR108C	Q12259	485 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	PNS1	Q12412	539 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	TDH2	P00358	332 aa	Known RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	CDC36	P06100	191 aa	Predicted RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	TUB1	P09733	447 aa	Known RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	RRT12	P25381	491 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	PRR1	P28708	518 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	SRB4	P32569	687 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	YDR415C	Q04033	374 aa	Predicted RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	SSQ1	Q05931	657 aa	Predicted RBP	4.61	□□□□□ -1.67
MRE11	YMR224C	YPL199C	Q08954	240 aa		4.61	□□□□□ -1.67
MRE11	YMR224C	ATP6	P00854	259 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	MDM10	P18409	493 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	GLN3	P18494	730 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	PUT3	P25502	979 aa	Predicted RBP	4.6	□□□□□ -1.67
MRE11	YMR224C	ZIP1	P31111	875 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	SWD2	P36104	329 aa	Predicted RBP	4.6	□□□□□ -1.67
MRE11	YMR224C	DTR1	P38125	572 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	BIG1	P38813	335 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	YFL040W	P43562	540 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	TRF5	P48561	642 aa	Known RBP	4.6	□□□□□ -1.67
MRE11	YMR224C	SED5	Q01590	340 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	YPL080C	Q02826	108 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	PIR3	Q03180	325 aa		4.6	□□□□□ -1.67
MRE11	YMR224C	MYO5	Q04439	1219 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms