RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	RPF2	P36160	344 aa	Known RBP	1.15	□□□□□ -2.22
CLU1	YMR012W	YBR053C	P38235	358 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	HEM14	P40012	539 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	ATM1	P40416	690 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	AZF1	P41696	914 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	BIO3	P50277	480 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	VPS73	P53142	486 aa	Known RBP	1.15	□□□□□ -2.22
CLU1	YMR012W	RTT102	P53330	157 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	YML096W	Q04489	525 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	TAF10	Q12030	206 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	YHR214C-E	Q8TGK0	99 aa		1.15	□□□□□ -2.22
CLU1	YMR012W	YDR157W	A0A023PZE8	133 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	RPL28	P02406	149 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	CDC37	P06101	506 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	GDH1	P07262	454 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	ERD1	P16151	362 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	DBP3	P20447	523 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	MRPL20	P22354	195 aa	Predicted RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	NTG1	P31378	399 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	YEL043W	P32618	956 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	FRE1	P32791	686 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	YKL162C	P36052	402 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	YIL012W	P40551	113 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	SMC3	P47037	1230 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	FRE4	P53746	719 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	ERV25	P54837	211 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	MCM21	Q06675	368 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	NTO1	Q12311	748 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	WTM1	Q12363	437 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	COX5A	P00424	153 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	HSP82	P02829	709 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	ASP3-2	P0CX77	362 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	ASP3-3	P0CX78	362 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	ASP3-4	P0CX79	362 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	ASP3-1	P0CZ17	362 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	SAT4	P25333	603 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	ERG9	P29704	444 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	YMC1	P32331	307 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	ATP11	P32453	318 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	IES6	P32617	166 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	DUG2	P38149	878 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	PHO88	P38264	188 aa	Predicted RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	YPC1	P38298	316 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	YNG2	P38806	282 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	PFS1	P38872	237 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	RPN3	P40016	523 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	TRS85	P46944	698 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	URH1	Q04179	340 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	RCO1	Q04779	684 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	YMR317W	Q04893	1140 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	YMR321C	Q04898	105 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	BSP1	Q06604	576 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	GAT3	Q07928	141 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	ETT1	Q08421	412 aa	Known RBP	1.15	□□□□□ -2.23
CLU1	YMR012W	ATG9	Q12142	997 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	TIP41	Q12199	356 aa		1.15	□□□□□ -2.23
CLU1	YMR012W	PDB1	P32473	366 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	MSS1	P32559	526 aa	Predicted RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	CDC5	P32562	705 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	YPK3	P38070	525 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	YIL169C	P40442	995 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	YIR042C	P40586	236 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	IAH1	P41734	238 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	RPA34	P47006	233 aa	Predicted RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	JHD2	P47156	728 aa	Predicted RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	ENP2	P48234	707 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	PKP2	P53170	491 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	RTC4	P53850	401 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	YMR102C	Q03177	834 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	NAT4	Q04751	285 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	AIM39	Q08223	395 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	ALE1	Q08548	619 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	DDC1	Q08949	612 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	HRT3	Q12347	344 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	PDR18	P53756	1333 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	FMP27	Q06179	2628 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	MRP1	P10662	321 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	SCL1	P21243	252 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	UTR1	P21373	530 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	PPH21	P23594	369 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	ERG1	P32476	496 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	ZRT1	P32804	376 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	EBP2	P36049	427 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	YBR241C	P38142	488 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	CTP1	P38152	299 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	SMC2	P38989	1170 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	SLM1	P40485	686 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	YIR014W	P40570	242 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	RPN14	P53196	417 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	DSL1	P53847	754 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	MTQ1	P53944	314 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	SLG1	P54867	378 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	SPP2	Q02521	185 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	YMR209C	Q03648	457 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	BSC1	Q12140	328 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	TFC7	Q12415	435 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	UBA3	Q99344	299 aa		1.14	□□□□□ -2.23
CLU1	YMR012W	PEP4	P07267	405 aa	Known RBP	1.14	□□□□□ -2.23
CLU1	YMR012W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	1.14	□□□□□ -2.23	not detected
CLU1	YMR012W	MEK1	P24719	497 aa	Predicted RBP	1.14	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 59.6 ms