RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C SPS22P25380 463 aa2.94□□□□□ -1.94
ATG27YJL178C TIP1P27654 210 aaPredicted RBP2.94□□□□□ -1.94
ATG27YJL178C URA7P28274 579 aaKnown RBP2.94□□□□□ -1.94
ATG27YJL178C SIN4P32259 974 aa2.94□□□□□ -1.94
ATG27YJL178C HIR2P32480 875 aa2.94□□□□□ -1.94
ATG27YJL178C CSE2P33308 149 aa2.94□□□□□ -1.94
ATG27YJL178C STB6P36085 766 aa2.94□□□□□ -1.94
ATG27YJL178C DRE2P36152 348 aa2.94□□□□□ -1.94
ATG27YJL178C ETR1P38071 380 aa2.94□□□□□ -1.94
ATG27YJL178C YBR056WP38081 501 aa2.94□□□□□ -1.94
ATG27YJL178C RIB5P38145 238 aa2.94□□□□□ -1.94
ATG27YJL178C MIX23P38162 196 aa2.94□□□□□ -1.94
ATG27YJL178C SIF2P38262 535 aa2.94□□□□□ -1.94
ATG27YJL178C MST28P39552 234 aa2.94□□□□□ -1.94
ATG27YJL178C DSE1P40077 573 aa2.94□□□□□ -1.94
ATG27YJL178C PRE5P40302 234 aaKnown RBP2.94□□□□□ -1.94
ATG27YJL178C REE1P40893 198 aa2.94□□□□□ -1.94
ATG27YJL178C LAM5P43560 674 aa2.94□□□□□ -1.94
ATG27YJL178C TMA22P47089 198 aaPredicted RBP2.94□□□□□ -1.94
ATG27YJL178C ECM27P47144 725 aa2.94□□□□□ -1.94
ATG27YJL178C HOP2P53187 214 aa2.94□□□□□ -1.94
ATG27YJL178C RPL22BP56628 122 aaKnown RBP2.94□□□□□ -1.94
ATG27YJL178C ROY1Q04847 553 aa2.94□□□□□ -1.94
ATG27YJL178C RRP45Q05636 305 aaKnown RBP2.94□□□□□ -1.94
ATG27YJL178C YET3Q07451 203 aa2.94□□□□□ -1.94
ATG27YJL178C CMS1Q07897 291 aaKnown RBP2.94□□□□□ -1.94
ATG27YJL178C MUM3Q08750 479 aa2.94□□□□□ -1.94
ATG27YJL178C YLR108CQ12259 485 aa2.94□□□□□ -1.94
ATG27YJL178C PAB1P04147 577 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
ATG27YJL178C ILV5P06168 395 aaKnown RBP2.93□□□□□ -1.94
ATG27YJL178C RSA4P25382 515 aaKnown RBP2.93□□□□□ -1.94
ATG27YJL178C ADK2P26364 225 aa2.93□□□□□ -1.94
ATG27YJL178C ERV1P27882 189 aa2.93□□□□□ -1.94
ATG27YJL178C YEL045CP32616 141 aa2.93□□□□□ -1.94
ATG27YJL178C HEL1P36113 551 aa2.93□□□□□ -1.94
ATG27YJL178C RPC37P36121 282 aa2.93□□□□□ -1.94
ATG27YJL178C HEK2P38199 381 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
ATG27YJL178C YBR137WP38276 179 aa2.93□□□□□ -1.94
ATG27YJL178C LYS1P38998 373 aaRIP-Chip data2.93□□□□□ -1.94not detected
ATG27YJL178C ATM1P40416 690 aa2.93□□□□□ -1.94
ATG27YJL178C SSU1P41930 458 aa2.93□□□□□ -1.94
ATG27YJL178C WWM1P43582 211 aaKnown RBP2.93□□□□□ -1.94
ATG27YJL178C YJR011CP47086 261 aaPredicted RBP2.93□□□□□ -1.94
ATG27YJL178C YJR054WP47114 497 aa2.93□□□□□ -1.94
ATG27YJL178C AZR1P50080 613 aa2.93□□□□□ -1.94
ATG27YJL178C SDT1P53078 280 aa2.93□□□□□ -1.94
ATG27YJL178C HXT11P54862 567 aa2.93□□□□□ -1.94
ATG27YJL178C YDR131CQ03899 556 aa2.93□□□□□ -1.94
ATG27YJL178C SXM1Q04175 944 aaKnown RBP2.93□□□□□ -1.94
ATG27YJL178C ERV41Q04651 352 aa2.93□□□□□ -1.94
ATG27YJL178C PAL1Q05518 499 aaKnown RBP2.93□□□□□ -1.94
ATG27YJL178C MRPL35Q06678 367 aa2.93□□□□□ -1.94
ATG27YJL178C COS7Q07788 383 aa2.93□□□□□ -1.94
ATG27YJL178C SLD7Q08457 257 aa2.93□□□□□ -1.94
ATG27YJL178C TIM18Q08749 192 aa2.93□□□□□ -1.94
ATG27YJL178C YLR053CQ12026 108 aa2.93□□□□□ -1.94
ATG27YJL178C TAF10Q12030 206 aa2.93□□□□□ -1.94
ATG27YJL178C PKH2Q12236 1081 aaKnown RBP2.93□□□□□ -1.94
ATG27YJL178C ORT1Q12375 292 aa2.93□□□□□ -1.94
ATG27YJL178C AFI1Q99222 893 aa2.93□□□□□ -1.94
ATG27YJL178C IZH4Q99393 312 aa2.93□□□□□ -1.94
ATG27YJL178C RAD3P06839 778 aa2.92□□□□□ -1.94
ATG27YJL178C IMA3P0CW40 589 aa2.92□□□□□ -1.94
ATG27YJL178C IMA4P0CW41 589 aa2.92□□□□□ -1.94
ATG27YJL178C SEC14P24280 304 aaKnown RBP2.92□□□□□ -1.94
ATG27YJL178C GEX1P25596 615 aa2.92□□□□□ -1.94
ATG27YJL178C NIP1P32497 812 aaKnown RBP2.92□□□□□ -1.94
ATG27YJL178C SOR1P35497 357 aaKnown RBP2.92□□□□□ -1.94
ATG27YJL178C NTC20P38302 140 aaPredicted RBP2.92□□□□□ -1.94
ATG27YJL178C HSM3P38348 480 aa2.92□□□□□ -1.94
ATG27YJL178C YHL026CP38740 315 aa2.92□□□□□ -1.94
ATG27YJL178C LIN1P38852 340 aaPredicted RBP2.92□□□□□ -1.94
ATG27YJL178C SCC4P40090 624 aa2.92□□□□□ -1.94
ATG27YJL178C CHS6P40955 746 aa2.92□□□□□ -1.94
ATG27YJL178C YFL040WP43562 540 aa2.92□□□□□ -1.94
ATG27YJL178C NCA3P46955 337 aa2.92□□□□□ -1.94
ATG27YJL178C HMS2P47175 358 aa2.92□□□□□ -1.94
ATG27YJL178C PHB2P50085 310 aa2.92□□□□□ -1.94
ATG27YJL178C KTR6P54070 446 aa2.92□□□□□ -1.94
ATG27YJL178C ADD37Q03233 198 aa2.92□□□□□ -1.94
ATG27YJL178C YMR209CQ03648 457 aa2.92□□□□□ -1.94
ATG27YJL178C SOR2Q07786 357 aa2.92□□□□□ -1.94
ATG27YJL178C IMA2Q08295 589 aa2.92□□□□□ -1.94
ATG27YJL178C DDC1Q08949 612 aa2.92□□□□□ -1.94
ATG27YJL178C APC9Q12107 265 aa2.92□□□□□ -1.94
ATG27YJL178C TMS1Q12116 473 aa2.92□□□□□ -1.94
ATG27YJL178C UBR2Q07963 1872 aa2.92□□□□□ -1.94
ATG27YJL178C SNA3P14359 133 aa2.91□□□□□ -1.94
ATG27YJL178C PDX1P16451 410 aa2.91□□□□□ -1.94
ATG27YJL178C REC107P21651 314 aa2.91□□□□□ -1.94
ATG27YJL178C MRPL25P23369 157 aa2.91□□□□□ -1.94
ATG27YJL178C PHO89P38361 574 aa2.91□□□□□ -1.94
ATG27YJL178C AIM18P38884 321 aa2.91□□□□□ -1.94
ATG27YJL178C FAA2P39518 744 aa2.91□□□□□ -1.94
ATG27YJL178C PEP8P40335 379 aa2.91□□□□□ -1.94
ATG27YJL178C LIA1P47120 325 aaKnown RBP2.91□□□□□ -1.94
ATG27YJL178C YNL134CP53912 376 aaKnown RBP2.91□□□□□ -1.94
ATG27YJL178C SKO1Q02100 647 aa2.91□□□□□ -1.94
ATG27YJL178C OSH6Q02201 448 aa2.91□□□□□ -1.94
ATG27YJL178C KAP120Q02932 1032 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms