RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W REE1P40893 198 aa9.23□□□□□ -0.93
UBA4YHR111W MNN5P46982 586 aa9.23□□□□□ -0.93
UBA4YHR111W SYF2P53277 215 aaPredicted RBP9.23□□□□□ -0.93
UBA4YHR111W SDC1Q03323 175 aa9.23□□□□□ -0.93
UBA4YHR111W EKI1Q03764 534 aa9.23□□□□□ -0.93
UBA4YHR111W BRX1Q08235 291 aaKnown RBP9.23□□□□□ -0.93
UBA4YHR111W PFK27Q12471 397 aaPredicted RBP9.23□□□□□ -0.93
UBA4YHR111W TSC13Q99190 310 aa9.23□□□□□ -0.93
UBA4YHR111W GDH2P33327 1092 aaKnown RBP9.22□□□□□ -0.93
UBA4YHR111W LHS1P36016 881 aa9.22□□□□□ -0.93
UBA4YHR111W YHR097CP38809 366 aaKnown RBP9.22□□□□□ -0.93
UBA4YHR111W YNL195CP40168 261 aa9.22□□□□□ -0.93
UBA4YHR111W YFL066CP43538 392 aa9.22□□□□□ -0.93
UBA4YHR111W NUP57P48837 541 aa9.22□□□□□ -0.93
UBA4YHR111W GAS2Q06135 555 aa9.22□□□□□ -0.93
UBA4YHR111W COX17Q12287 69 aa9.22□□□□□ -0.93
UBA4YHR111W FLO9P39712 1322 aa9.21□□□□□ -0.93
UBA4YHR111W PTC6P25646 442 aa9.21□□□□□ -0.94
UBA4YHR111W SAC1P32368 623 aaKnown RBP9.21□□□□□ -0.94
UBA4YHR111W MTC4P38335 694 aaKnown RBP9.21□□□□□ -0.94
UBA4YHR111W RBG1P39729 369 aa9.21□□□□□ -0.94
UBA4YHR111W HSV2P50079 448 aaPredicted RBP9.21□□□□□ -0.94
UBA4YHR111W MPC1P53157 130 aaKnown RBP9.21□□□□□ -0.94
UBA4YHR111W YNL095CP53932 642 aa9.21□□□□□ -0.94
UBA4YHR111W TPS1Q00764 495 aaKnown RBP9.21□□□□□ -0.94
UBA4YHR111W SPR6Q01684 191 aa9.21□□□□□ -0.94
UBA4YHR111W SNX41Q04053 625 aa9.21□□□□□ -0.94
UBA4YHR111W DBP9Q06218 594 aaKnown RBP9.21□□□□□ -0.94
UBA4YHR111W HDA2Q06629 674 aa9.21□□□□□ -0.94
UBA4YHR111W VPS36Q06696 566 aa9.21□□□□□ -0.94
UBA4YHR111W ENB1Q08299 606 aa9.21□□□□□ -0.94
UBA4YHR111W HNT3Q08702 217 aa9.21□□□□□ -0.94
UBA4YHR111W SWM1Q12379 170 aa9.21□□□□□ -0.94
UBA4YHR111W MRX4Q12467 430 aa9.21□□□□□ -0.94
UBA4YHR111W SFG1Q12507 346 aa9.21□□□□□ -0.94
UBA4YHR111W TIM9O74700 87 aa9.2□□□□□ -0.94
UBA4YHR111W STE12P13574 688 aa9.2□□□□□ -0.94
UBA4YHR111W CTA1P15202 515 aa9.2□□□□□ -0.94
UBA4YHR111W PET9P18239 318 aaKnown RBP9.2□□□□□ -0.94
UBA4YHR111W ERD2P18414 219 aa9.2□□□□□ -0.94
UBA4YHR111W NTG1P31378 399 aa9.2□□□□□ -0.94
UBA4YHR111W DPH5P32469 300 aaPredicted RBP9.2□□□□□ -0.94
UBA4YHR111W GSH1P32477 678 aa9.2□□□□□ -0.94
UBA4YHR111W RPN2P32565 945 aaKnown RBP9.2□□□□□ -0.94
UBA4YHR111W PDX3P38075 228 aaKnown RBP9.2□□□□□ -0.94
UBA4YHR111W YBR241CP38142 488 aa9.2□□□□□ -0.94
UBA4YHR111W YHR219WP38900 624 aa9.2□□□□□ -0.94
UBA4YHR111W PRY1P47032 299 aa9.2□□□□□ -0.94
UBA4YHR111W YJR142WP47173 342 aa9.2□□□□□ -0.94
UBA4YHR111W RNH202Q05635 350 aa9.2□□□□□ -0.94
UBA4YHR111W NOP12Q08208 459 aaKnown RBP9.2□□□□□ -0.94
UBA4YHR111W MCP1Q12106 302 aa9.2□□□□□ -0.94
UBA4YHR111W YRA1Q12159 226 aaKnown RBP9.2□□□□□ -0.94
UBA4YHR111W WTM2Q12206 467 aa9.2□□□□□ -0.94
UBA4YHR111W SSA3P09435 649 aaKnown RBP9.19□□□□□ -0.94
UBA4YHR111W NFS1P25374 497 aa9.19□□□□□ -0.94
UBA4YHR111W EHD3P28817 500 aa9.19□□□□□ -0.94
UBA4YHR111W AVO1Q08236 1176 aa9.19□□□□□ -0.94
UBA4YHR111W YOL163WP0CF20 169 aa9.18□□□□□ -0.94
UBA4YHR111W HIR2P32480 875 aa9.18□□□□□ -0.94
UBA4YHR111W YEF1P32622 495 aa9.18□□□□□ -0.94
UBA4YHR111W RRP4P38792 359 aaKnown RBP9.18□□□□□ -0.94
UBA4YHR111W RCY1P39531 840 aa9.18□□□□□ -0.94
UBA4YHR111W SHO1P40073 367 aa9.18□□□□□ -0.94
UBA4YHR111W YGR066CP53242 292 aa9.18□□□□□ -0.94
UBA4YHR111W RRN5Q02983 363 aa9.18□□□□□ -0.94
UBA4YHR111W YMR102CQ03177 834 aa9.18□□□□□ -0.94
UBA4YHR111W YPL225WQ08971 146 aaKnown RBP9.18□□□□□ -0.94
UBA4YHR111W YOL087CQ99247 1116 aa9.18□□□□□ -0.94
UBA4YHR111W PDX1P16451 410 aa9.17□□□□□ -0.94
UBA4YHR111W REC107P21651 314 aa9.17□□□□□ -0.94
UBA4YHR111W IDH1P28834 360 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
UBA4YHR111W KRE6P32486 720 aa9.17□□□□□ -0.94
UBA4YHR111W YHR180WP38868 163 aa9.17□□□□□ -0.94
UBA4YHR111W XBP1P40489 647 aa9.17□□□□□ -0.94
UBA4YHR111W HXT9P40885 567 aa9.17□□□□□ -0.94
UBA4YHR111W DIM1P41819 318 aaKnown RBP9.17□□□□□ -0.94
UBA4YHR111W GPI8P49018 411 aa9.17□□□□□ -0.94
UBA4YHR111W IMD4P50094 524 aaKnown RBP9.17□□□□□ -0.94
UBA4YHR111W BUD9P53226 547 aa9.17□□□□□ -0.94
UBA4YHR111W MEP3P53390 489 aa9.17□□□□□ -0.94
UBA4YHR111W HXT11P54862 567 aa9.17□□□□□ -0.94
UBA4YHR111W COX20Q04935 205 aa9.17□□□□□ -0.94
UBA4YHR111W YDL109CQ12103 647 aa9.17□□□□□ -0.94
UBA4YHR111W RPL24AP04449 155 aaKnown RBP9.16□□□□□ -0.94
UBA4YHR111W CBP6P07253 162 aaPredicted RBP9.16□□□□□ -0.94
UBA4YHR111W ITR2P30606 609 aa9.16□□□□□ -0.94
UBA4YHR111W RTG1P32607 177 aa9.16□□□□□ -0.94
UBA4YHR111W RIX1P38883 763 aaPredicted RBP9.16□□□□□ -0.94
UBA4YHR111W SWD1P39706 426 aa9.16□□□□□ -0.94
UBA4YHR111W SHE4P51534 789 aa9.16□□□□□ -0.94
UBA4YHR111W ALG12P53730 551 aa9.16□□□□□ -0.94
UBA4YHR111W HRI1Q05905 244 aaKnown RBP9.16□□□□□ -0.94
UBA4YHR111W SWA2Q06677 668 aa9.16□□□□□ -0.94
UBA4YHR111W CRT10Q08226 957 aa9.16□□□□□ -0.94
UBA4YHR111W RDL2Q08742 149 aaKnown RBP9.16□□□□□ -0.94
UBA4YHR111W DFG16Q99234 619 aa9.16□□□□□ -0.94
UBA4YHR111W DET1Q99288 334 aaKnown RBP9.16□□□□□ -0.94
UBA4YHR111W SCO1P23833 295 aa9.15□□□□□ -0.94
UBA4YHR111W CLB4P24871 460 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms