RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	PUT2	P07275	575 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	DAL80	P26343	269 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	MNS1	P32906	549 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	MTC6	P38849	526 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	RFC4	P40339	323 aa	Known RBP	4.91	□□□□□ -1.62
RSC30	YHR056C	SHE4	P51534	789 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	RAD30	Q04049	632 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	PNP1	Q05788	311 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	TAZ1	Q06510	381 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	AVO1	Q08236	1176 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	ERP4	Q12450	207 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	NUP2	P32499	720 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	SEC17	P32602	292 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	SPC29	P33419	253 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	PFK26	P40433	827 aa	Known RBP	4.91	□□□□□ -1.62
RSC30	YHR056C	FAR3	P46671	204 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	SIP18	P50263	79 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	COX18	P53239	316 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	YNL046W	P53956	172 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	YMR265C	Q03508	461 aa	Known RBP	4.91	□□□□□ -1.62
RSC30	YHR056C	NAT4	Q04751	285 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	ADH6	Q04894	360 aa	Known RBP	4.91	□□□□□ -1.62
RSC30	YHR056C	COX20	Q04935	205 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	IRC19	Q07843	230 aa		4.91	□□□□□ -1.62
RSC30	YHR056C	UGA1	P17649	471 aa		4.9	□□□□□ -1.62
RSC30	YHR056C	YBR096W	P38256	230 aa		4.9	□□□□□ -1.62
RSC30	YHR056C	ARB1	P40024	610 aa	Known RBP	4.9	□□□□□ -1.62
RSC30	YHR056C	NOP12	Q08208	459 aa	Known RBP	4.9	□□□□□ -1.62
RSC30	YHR056C	SAS5	Q99314	248 aa		4.9	□□□□□ -1.62
RSC30	YHR056C	FSH3	Q99369	266 aa		4.9	□□□□□ -1.62
RSC30	YHR056C	CTA1	P15202	515 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	SPO7	P18410	259 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	SLC1	P33333	303 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	GAB1	P41733	394 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	TVP15	Q03860	143 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	SHE9	Q04172	456 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	PEP4	P07267	405 aa	Known RBP	4.9	□□□□□ -1.63
RSC30	YHR056C	ZWF1	P11412	505 aa	Known RBP	4.9	□□□□□ -1.63
RSC30	YHR056C	DBF2	P22204	572 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	PHO91	P27514	894 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	DEP1	P31385	405 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
RSC30	YHR056C	PRY2	P36110	329 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	RLP7	P40693	322 aa	Known RBP	4.9	□□□□□ -1.63
RSC30	YHR056C	HXT9	P40885	567 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	RBG2	P53295	368 aa	Known RBP	4.9	□□□□□ -1.63
RSC30	YHR056C	HXT11	P54862	567 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	KAP120	Q02932	1032 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	GMC1	Q04399	608 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	YKU80	Q04437	629 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	TMA46	Q12000	345 aa	Known RBP	4.9	□□□□□ -1.63
RSC30	YHR056C	APC9	Q12107	265 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	MMP1	Q12372	583 aa		4.9	□□□□□ -1.63
RSC30	YHR056C	YME2	P32843	850 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	MTC4	P38335	694 aa	Known RBP	4.89	□□□□□ -1.63
RSC30	YHR056C	VPS41	P38959	992 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	SMX2	P40204	77 aa	Known RBP	4.89	□□□□□ -1.63
RSC30	YHR056C	CRZ1	P53968	678 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	SGT1	Q08446	395 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	YDL109C	Q12103	647 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	RPS21B	Q3E754	87 aa	Known RBP	4.89	□□□□□ -1.63
RSC30	YHR056C	DYN1	P36022	4092 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	YAL064W-B	O13512	126 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	RAS2	P01120	322 aa	Known RBP	4.89	□□□□□ -1.63
RSC30	YHR056C	CNA1	P23287	553 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	CLB3	P24870	427 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	MAE1	P36013	669 aa	Known RBP	4.89	□□□□□ -1.63
RSC30	YHR056C	SKO1	Q02100	647 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	YAP6	Q03935	383 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	RTR2	Q12378	196 aa		4.89	□□□□□ -1.63
RSC30	YHR056C	TRP3	P00937	484 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	RPS23A	P0CX29	145 aa	Known RBP	4.88	□□□□□ -1.63
RSC30	YHR056C	RPS23B	P0CX30	145 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	RAD14	P28519	371 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	DAL3	P32459	195 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	YHR180W	P38868	163 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	NIT2	P47016	307 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	YGR126W	P53274	230 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	MMT1	Q03218	510 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	JLP1	Q12358	412 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	STE14	P32584	239 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	SOF1	P33750	489 aa	Known RBP	4.88	□□□□□ -1.63
RSC30	YHR056C	ROT2	P38138	954 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	PIG2	P40187	538 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	DCP2	P53550	970 aa	Known RBP	4.88	□□□□□ -1.63
RSC30	YHR056C	COS1	P53822	381 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	YNL010W	P53981	241 aa	Known RBP	4.88	□□□□□ -1.63
RSC30	YHR056C	SED1	Q01589	338 aa		4.88	□□□□□ -1.63
RSC30	YHR056C	RTC5	Q12108	567 aa	Known RBP	4.88	□□□□□ -1.63
RSC30	YHR056C	MSI1	P13712	422 aa		4.87	□□□□□ -1.63
RSC30	YHR056C	THI4	P32318	326 aa		4.87	□□□□□ -1.63
RSC30	YHR056C	AIM3	P38266	947 aa	Known RBP	4.87	□□□□□ -1.63
RSC30	YHR056C	RRP4	P38792	359 aa	Known RBP	4.87	□□□□□ -1.63
RSC30	YHR056C	LAS21	P40367	830 aa		4.87	□□□□□ -1.63
RSC30	YHR056C	LEM3	P42838	414 aa		4.87	□□□□□ -1.63
RSC30	YHR056C	MTQ1	P53944	314 aa		4.87	□□□□□ -1.63
RSC30	YHR056C	HTS1	P07263	546 aa	Known RBP	4.87	□□□□□ -1.63
RSC30	YHR056C	DBP3	P20447	523 aa	Known RBP	4.87	□□□□□ -1.63
RSC30	YHR056C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	RIP-Chip
RSC30	YHR056C	RCK1	P38622	512 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms