RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W SPL2P38839 148 aa1.65□□□□□ -2.15
RTT102YGR275W YER184CP39961 794 aa1.65□□□□□ -2.15
RTT102YGR275W GPD2P41911 440 aaKnown RBP1.65□□□□□ -2.15
RTT102YGR275W AIP1P46680 615 aaKnown RBP1.65□□□□□ -2.15
RTT102YGR275W SPR6Q01684 191 aa1.65□□□□□ -2.15
RTT102YGR275W ACL4Q03771 387 aa1.65□□□□□ -2.15
RTT102YGR275W YMR155WQ03795 547 aa1.65□□□□□ -2.15
RTT102YGR275W RPN9Q04062 393 aaKnown RBP1.65□□□□□ -2.15
RTT102YGR275W MFG1Q07684 458 aa1.65□□□□□ -2.15
RTT102YGR275W FCY22Q12119 530 aa1.65□□□□□ -2.15
RTT102YGR275W PGA3Q12746 312 aaKnown RBP1.65□□□□□ -2.15
RTT102YGR275W YDR524C-BQ3E6R4 66 aa1.65□□□□□ -2.15
RTT102YGR275W DUR1,2P32528 1835 aaKnown RBP1.65□□□□□ -2.15
RTT102YGR275W FKS1P38631 1876 aaKnown RBP1.65□□□□□ -2.15
RTT102YGR275W MYO1P08964 1928 aa1.64□□□□□ -2.15
RTT102YGR275W DST1P07273 309 aa1.64□□□□□ -2.15
RTT102YGR275W YEF1P32622 495 aa1.64□□□□□ -2.15
RTT102YGR275W ECT1P33412 323 aa1.64□□□□□ -2.15
RTT102YGR275W MRPL27P36526 146 aaPredicted RBP1.64□□□□□ -2.15
RTT102YGR275W ECM8P38246 354 aa1.64□□□□□ -2.15
RTT102YGR275W STP2P38704 541 aa1.64□□□□□ -2.15
RTT102YGR275W GAT2P40209 560 aa1.64□□□□□ -2.15
RTT102YGR275W PFS2P42841 465 aaKnown RBP1.64□□□□□ -2.15
RTT102YGR275W COS1P53822 381 aa1.64□□□□□ -2.15
RTT102YGR275W RPL21AQ02753 160 aaKnown RBP1.64□□□□□ -2.15
RTT102YGR275W IRC4Q03036 179 aa1.64□□□□□ -2.15
RTT102YGR275W YLR345WQ06137 509 aa1.64□□□□□ -2.15
RTT102YGR275W RPL21BQ12672 160 aaKnown RBP1.64□□□□□ -2.15
RTT102YGR275W YCR024C-BQ3E7Z8 88 aa1.64□□□□□ -2.15
RTT102YGR275W MTR10Q99189 972 aa1.64□□□□□ -2.15
RTT102YGR275W AFI1Q99222 893 aa1.64□□□□□ -2.15
RTT102YGR275W FMP27Q06179 2628 aa1.64□□□□□ -2.15
RTT102YGR275W SWI1P09547 1314 aa1.64□□□□□ -2.15
RTT102YGR275W COX3P00420 269 aa1.63□□□□□ -2.15
RTT102YGR275W INH1P01097 85 aa1.63□□□□□ -2.15
RTT102YGR275W STE7P06784 515 aa1.63□□□□□ -2.15
RTT102YGR275W POT1P27796 417 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
RTT102YGR275W SKN1P33336 771 aa1.63□□□□□ -2.15
RTT102YGR275W WSS1P38838 269 aa1.63□□□□□ -2.15
RTT102YGR275W RTR1P40084 226 aaPredicted RBP1.63□□□□□ -2.15
RTT102YGR275W MMF1P40185 145 aaKnown RBP1.63□□□□□ -2.15
RTT102YGR275W HST1P53685 503 aa1.63□□□□□ -2.15
RTT102YGR275W YDL114WQ07530 308 aa1.63□□□□□ -2.15
RTT102YGR275W VPS54Q12071 889 aa1.63□□□□□ -2.15
RTT102YGR275W RUP1Q12242 671 aa1.63□□□□□ -2.15
RTT102YGR275W ISN1Q99312 450 aa1.63□□□□□ -2.15
RTT102YGR275W ACC1Q00955 2233 aaKnown RBP1.63□□□□□ -2.15
RTT102YGR275W IRA2P19158 3079 aa1.63□□□□□ -2.15
RTT102YGR275W CDC31P06704 161 aaKnown RBP1.62□□□□□ -2.15
RTT102YGR275W CDC21P06785 304 aa1.62□□□□□ -2.15
RTT102YGR275W SSC1P0CS90 654 aaKnown RBP1.62□□□□□ -2.15
RTT102YGR275W VMA2P16140 517 aaKnown RBP1.62□□□□□ -2.15
RTT102YGR275W ALG1P16661 449 aa1.62□□□□□ -2.15
RTT102YGR275W ASC1P38011 319 aaKnown RBP1.62□□□□□ -2.15
RTT102YGR275W PEX22P39718 180 aa1.62□□□□□ -2.15
RTT102YGR275W TRM112P53738 135 aaPredicted RBP1.62□□□□□ -2.15
RTT102YGR275W MMR1Q06324 491 aa1.62□□□□□ -2.15
RTT102YGR275W PIN3Q06449 215 aa1.62□□□□□ -2.15
RTT102YGR275W YDL199CQ12407 687 aa1.62□□□□□ -2.15
RTT102YGR275W IRA1P18963 3092 aa1.62□□□□□ -2.15
RTT102YGR275W PAB1P04147 577 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15 RIP-Chip
RTT102YGR275W ARO3P14843 370 aaKnown RBP1.61□□□□□ -2.15
RTT102YGR275W GIT1P25346 518 aa1.61□□□□□ -2.15
RTT102YGR275W RPN12P32496 274 aa1.61□□□□□ -2.15
RTT102YGR275W NFU1P32860 256 aa1.61□□□□□ -2.15
RTT102YGR275W BYE1P36106 594 aa1.61□□□□□ -2.15
RTT102YGR275W HEL1P36113 551 aa1.61□□□□□ -2.15
RTT102YGR275W SOL2P37262 315 aa1.61□□□□□ -2.15
RTT102YGR275W YBL028CP38202 106 aa1.61□□□□□ -2.15
RTT102YGR275W OLA1P38219 394 aaKnown RBP1.61□□□□□ -2.15
RTT102YGR275W VHS2P40463 436 aa1.61□□□□□ -2.15
RTT102YGR275W CAK1P43568 368 aaPredicted RBP1.61□□□□□ -2.15
RTT102YGR275W PIB2P53191 635 aa1.61□□□□□ -2.15
RTT102YGR275W VHT1P53241 593 aa1.61□□□□□ -2.15
RTT102YGR275W BNI5P53890 448 aaKnown RBP1.61□□□□□ -2.15
RTT102YGR275W VPS72Q03388 795 aa1.61□□□□□ -2.15
RTT102YGR275W SCM3Q12334 223 aa1.61□□□□□ -2.15
RTT102YGR275W TPI1P00942 248 aaKnown RBP1.6□□□□□ -2.15
RTT102YGR275W ASP3-2P0CX77 362 aa1.6□□□□□ -2.15
RTT102YGR275W ASP3-3P0CX78 362 aa1.6□□□□□ -2.15
RTT102YGR275W ASP3-4P0CX79 362 aa1.6□□□□□ -2.15
RTT102YGR275W ASP3-1P0CZ17 362 aa1.6□□□□□ -2.15
RTT102YGR275W PUT4P15380 627 aa1.6□□□□□ -2.15
RTT102YGR275W FUR1P18562 216 aaKnown RBP1.6□□□□□ -2.15
RTT102YGR275W CMK2P22517 447 aa1.6□□□□□ -2.15
RTT102YGR275W FUN26P31381 517 aa1.6□□□□□ -2.15
RTT102YGR275W SKT5P34226 696 aa1.6□□□□□ -2.15
RTT102YGR275W SLM4P38247 162 aa1.6□□□□□ -2.15
RTT102YGR275W WSC4P38739 605 aa1.6□□□□□ -2.15
RTT102YGR275W LSM12P38828 187 aaKnown RBP1.6□□□□□ -2.15
RTT102YGR275W GPI16P38875 610 aa1.6□□□□□ -2.15
RTT102YGR275W LSM5P40089 93 aaKnown RBP1.6□□□□□ -2.15
RTT102YGR275W YFH7P43591 353 aa1.6□□□□□ -2.15
RTT102YGR275W MPP10P47083 593 aaKnown RBP1.6□□□□□ -2.15
RTT102YGR275W AEP3Q12089 606 aa1.6□□□□□ -2.15
RTT102YGR275W HMS1Q12398 434 aa1.6□□□□□ -2.15
RTT102YGR275W SAC3P46674 1301 aa1.6□□□□□ -2.15
RTT102YGR275W RPP0P05317 312 aaKnown RBP1.59□□□□□ -2.15
RTT102YGR275W RPS19AP07280 144 aaKnown RBP1.59□□□□□ -2.15
RTT102YGR275W RPS19BP07281 144 aaPredicted RBP1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms