RNA–Protein interactions for RNA: YGL180W

ATG1, Transcript of Protein serine/threonine kinase, yeast

Gene ATG1, Length 2,694 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG1	YGL180W	SEY1	Q99287	776 aa		4.69	□□□□□ -1.66
ATG1	YGL180W	CSM1	P25651	190 aa		4.69	□□□□□ -1.66
ATG1	YGL180W	ARN1	P38731	627 aa		4.69	□□□□□ -1.66
ATG1	YGL180W	JHD2	P47156	728 aa	Predicted RBP	4.69	□□□□□ -1.66
ATG1	YGL180W	NOP19	P53317	196 aa	Predicted RBP	4.69	□□□□□ -1.66
ATG1	YGL180W	BTS1	Q12051	335 aa		4.69	□□□□□ -1.66
ATG1	YGL180W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
ATG1	YGL180W	RAD9	P14737	1309 aa		4.68	□□□□□ -1.66
ATG1	YGL180W	MKK1	P32490	508 aa		4.68	□□□□□ -1.66
ATG1	YGL180W	LOS1	P33418	1100 aa	Predicted RBP	4.68	□□□□□ -1.66
ATG1	YGL180W	GPX2	P38143	162 aa		4.68	□□□□□ -1.66
ATG1	YGL180W	AIM3	P38266	947 aa	Known RBP	4.68	□□□□□ -1.66
ATG1	YGL180W	GAL4	P04386	881 aa		4.68	□□□□□ -1.66
ATG1	YGL180W	OSM1	P21375	501 aa	Known RBP	4.68	□□□□□ -1.66
ATG1	YGL180W	YCR007C	P25354	239 aa		4.68	□□□□□ -1.66
ATG1	YGL180W	APM1	Q00776	475 aa	Predicted RBP	4.68	□□□□□ -1.66
ATG1	YGL180W	MUK1	Q02866	612 aa		4.68	□□□□□ -1.66
ATG1	YGL180W	RVB1	Q03940	463 aa	Known RBP	4.68	□□□□□ -1.66
ATG1	YGL180W	SEC13	Q04491	297 aa	Known RBP	4.68	□□□□□ -1.66
ATG1	YGL180W	GFD1	Q04839	188 aa	Known RBP	4.68	□□□□□ -1.66
ATG1	YGL180W	MCH4	Q08268	501 aa		4.68	□□□□□ -1.66
ATG1	YGL180W	HEM1	P09950	548 aa	Predicted RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	YMC1	P32331	307 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	VMA6	P32366	345 aa	Known RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	SKG6	P32900	734 aa	Predicted RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	MRPL6	P32904	214 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	LAG1	P38703	411 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	EGD2	P38879	174 aa	Known RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	ARG2	P40360	574 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	MNN10	P50108	393 aa	Known RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	YNL040W	P53960	456 aa	Predicted RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	LOA1	Q06508	300 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	APC9	Q12107	265 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	SNF8	Q12483	233 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	TEF1	P02994	458 aa	Known RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	SSC1	P0CS90	654 aa	Known RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	ARF1	P11076	181 aa	Known RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	ECM15	P35195	104 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	MAL32	P38158	584 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	RFC4	P40339	323 aa	Known RBP	4.67	□□□□□ -1.66
ATG1	YGL180W	POP1	P41812	875 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	MAL12	P53341	584 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	KRE28	Q04431	385 aa		4.67	□□□□□ -1.66
ATG1	YGL180W	YDR157W	A0A023PZE8	133 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	PPA2	P28239	310 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	ATP7	P30902	174 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	SPS19	P32573	292 aa	Known RBP	4.66	□□□□□ -1.66
ATG1	YGL180W	SPO23	P33757	523 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	CBT1	P36038	271 aa	Predicted RBP	4.66	□□□□□ -1.66
ATG1	YGL180W	ROT2	P38138	954 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	SEH1	P53011	349 aa	Known RBP	4.66	□□□□□ -1.66
ATG1	YGL180W	PCP1	P53259	346 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	BNA7	Q04066	261 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	IRC10	Q08118	586 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	YOL073C	Q08232	322 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	MED7	Q08278	222 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	DSE3	Q08729	430 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	YOR387C	Q08910	206 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	VIK1	Q12045	647 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	YPR1	Q12458	312 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	QCR7	P00128	127 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	DCC1	P25559	380 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	SMB1	P40018	196 aa	Known RBP	4.66	□□□□□ -1.66
ATG1	YGL180W	YFR057W	P43625	151 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	PXR1	P53335	271 aa	Predicted RBP	4.66	□□□□□ -1.66
ATG1	YGL180W	NSG2	P53898	299 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	THI20	Q08224	551 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	REX4	Q08237	289 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	YLR108C	Q12259	485 aa		4.66	□□□□□ -1.66
ATG1	YGL180W	REV1	P12689	985 aa		4.65	□□□□□ -1.66
ATG1	YGL180W	APE2	P32454	952 aa	Known RBP	4.65	□□□□□ -1.66
ATG1	YGL180W	PDR3	P33200	976 aa		4.65	□□□□□ -1.66
ATG1	YGL180W	NBP1	P52919	319 aa	Predicted RBP	4.65	□□□□□ -1.66
ATG1	YGL180W	YIP1	P53039	248 aa		4.65	□□□□□ -1.66
ATG1	YGL180W	DUG3	P53871	357 aa		4.65	□□□□□ -1.66
ATG1	YGL180W	YLL056C	Q12177	298 aa		4.65	□□□□□ -1.66
ATG1	YGL180W	PET494	P07390	489 aa	Predicted RBP	4.65	□□□□□ -1.67
ATG1	YGL180W	NAM2	P11325	894 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	VMA5	P31412	392 aa	Known RBP	4.65	□□□□□ -1.67
ATG1	YGL180W	MIC12	P38341	106 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	SNZ3	P43545	298 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	RRT5	P43607	289 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	AZR1	P50080	613 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	SNZ2	P53824	298 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	OST6	Q03723	332 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	YMR166C	Q03829	368 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	CSM4	Q08955	156 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	RGT2	Q12300	763 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	RDL1	Q12305	139 aa	Known RBP	4.65	□□□□□ -1.67
ATG1	YGL180W	YPR053C	Q6Q5F3	151 aa		4.65	□□□□□ -1.67
ATG1	YGL180W	HIS4	P00815	799 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	RFA3	P26755	122 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	VPS21	P36017	210 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	FAA2	P39518	744 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	COX16	P47081	118 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	YNR048W	P53740	393 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	ALG11	P53954	548 aa	Known RBP	4.64	□□□□□ -1.67
ATG1	YGL180W	YPL080C	Q02826	108 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	YDC1	Q02896	317 aa		4.64	□□□□□ -1.67
ATG1	YGL180W	SNA4	Q07549	140 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms