RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C PES4P39684 611 aa3.67□□□□□ -1.82
TRM1YDR120C ATM1P40416 690 aa3.67□□□□□ -1.82
TRM1YDR120C YGL039WP53183 348 aaKnown RBP3.67□□□□□ -1.82
TRM1YDR120C DBP9Q06218 594 aaKnown RBP3.67□□□□□ -1.82
TRM1YDR120C YRM1Q12340 786 aa3.67□□□□□ -1.82
TRM1YDR120C ARF1P11076 181 aaKnown RBP3.67□□□□□ -1.82
TRM1YDR120C SCH9P11792 824 aaKnown RBP3.67□□□□□ -1.82
TRM1YDR120C REE1P40893 198 aa3.67□□□□□ -1.82
TRM1YDR120C COS1P53822 381 aa3.67□□□□□ -1.82
TRM1YDR120C SPH1Q06160 661 aa3.67□□□□□ -1.82
TRM1YDR120C ERP3Q12403 225 aa3.67□□□□□ -1.82
TRM1YDR120C SNA3P14359 133 aa3.66□□□□□ -1.82
TRM1YDR120C COQ1P18900 473 aa3.66□□□□□ -1.82
TRM1YDR120C NAM9P27929 486 aa3.66□□□□□ -1.82
TRM1YDR120C DEG1P31115 442 aaKnown RBP3.66□□□□□ -1.82
TRM1YDR120C YEF1P32622 495 aa3.66□□□□□ -1.82
TRM1YDR120C TOA2P32774 122 aa3.66□□□□□ -1.82
TRM1YDR120C PAD1P33751 242 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
TRM1YDR120C DOA1P36037 715 aa3.66□□□□□ -1.82
TRM1YDR120C MCR1P36060 302 aaKnown RBP3.66□□□□□ -1.82
TRM1YDR120C AVT5P38176 459 aa3.66□□□□□ -1.82
TRM1YDR120C SBE22P38814 852 aa3.66□□□□□ -1.82
TRM1YDR120C PTH1P38876 190 aaKnown RBP3.66□□□□□ -1.82
TRM1YDR120C VPS45P38932 577 aa3.66□□□□□ -1.82
TRM1YDR120C ATP22P50273 684 aaPredicted RBP3.66□□□□□ -1.82
TRM1YDR120C RRN9P53437 365 aa3.66□□□□□ -1.82
TRM1YDR120C CWC25P53854 179 aaKnown RBP3.66□□□□□ -1.82
TRM1YDR120C SPR6Q01684 191 aa3.66□□□□□ -1.82
TRM1YDR120C ASA1Q06822 443 aa3.66□□□□□ -1.82
TRM1YDR120C SFG1Q12507 346 aa3.66□□□□□ -1.82
TRM1YDR120C RPS8AP0CX39 200 aaKnown RBP3.65□□□□□ -1.82
TRM1YDR120C RPS8BP0CX40 200 aaKnown RBP3.65□□□□□ -1.82
TRM1YDR120C RNA1P11745 407 aaKnown RBP3.65□□□□□ -1.82
TRM1YDR120C MAS2P11914 482 aa3.65□□□□□ -1.82
TRM1YDR120C ANP1P32629 500 aa3.65□□□□□ -1.82
TRM1YDR120C COX14P39103 70 aa3.65□□□□□ -1.82
TRM1YDR120C YPI1P43587 155 aa3.65□□□□□ -1.82
TRM1YDR120C YNR068CP53754 272 aa3.65□□□□□ -1.82
TRM1YDR120C UTP6Q02354 440 aaKnown RBP3.65□□□□□ -1.82
TRM1YDR120C MRPL35Q06678 367 aa3.65□□□□□ -1.82
TRM1YDR120C MDM36Q06820 579 aa3.65□□□□□ -1.82
TRM1YDR120C NDE2Q07500 545 aa3.65□□□□□ -1.82
TRM1YDR120C LDS2Q08218 356 aa3.65□□□□□ -1.82
TRM1YDR120C TMS1Q12116 473 aa3.65□□□□□ -1.82
TRM1YDR120C YOP1Q12402 180 aa3.65□□□□□ -1.82
TRM1YDR120C NUM1Q00402 2748 aa3.65□□□□□ -1.83
TRM1YDR120C PAB1P04147 577 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
TRM1YDR120C TPK3P05986 398 aa3.64□□□□□ -1.83
TRM1YDR120C SSC1P0CS90 654 aaKnown RBP3.64□□□□□ -1.83
TRM1YDR120C ARO2P28777 376 aaKnown RBP3.64□□□□□ -1.83
TRM1YDR120C PSO2P30620 661 aa3.64□□□□□ -1.83
TRM1YDR120C DBP7P36120 742 aaKnown RBP3.64□□□□□ -1.83
TRM1YDR120C MSG5P38590 489 aa3.64□□□□□ -1.83
TRM1YDR120C LSB1P53281 241 aa3.64□□□□□ -1.83
TRM1YDR120C BTN2P53286 410 aa3.64□□□□□ -1.83
TRM1YDR120C YNL143CP53908 130 aa3.64□□□□□ -1.83
TRM1YDR120C YMR321CQ04898 105 aa3.64□□□□□ -1.83
TRM1YDR120C UBR2Q07963 1872 aa3.64□□□□□ -1.83
TRM1YDR120C MNS1P32906 549 aa3.64□□□□□ -1.83
TRM1YDR120C ALD5P40047 520 aaKnown RBP3.64□□□□□ -1.83
TRM1YDR120C MRM2P53123 320 aa3.64□□□□□ -1.83
TRM1YDR120C NUP116Q02630 1113 aa3.64□□□□□ -1.83
TRM1YDR120C HRI1Q05905 244 aaKnown RBP3.64□□□□□ -1.83
TRM1YDR120C PML1Q07930 204 aaPredicted RBP3.64□□□□□ -1.83
TRM1YDR120C PSY3Q12318 242 aa3.64□□□□□ -1.83
TRM1YDR120C RDS1P25611 832 aa3.63□□□□□ -1.83
TRM1YDR120C POP5P28005 173 aa3.63□□□□□ -1.83
TRM1YDR120C DPH5P32469 300 aaPredicted RBP3.63□□□□□ -1.83
TRM1YDR120C SMI1P32566 505 aa3.63□□□□□ -1.83
TRM1YDR120C YEL043WP32618 956 aa3.63□□□□□ -1.83
TRM1YDR120C PAN6P40459 309 aa3.63□□□□□ -1.83
TRM1YDR120C YIL029CP40538 142 aa3.63□□□□□ -1.83
TRM1YDR120C NAS2P40555 220 aa3.63□□□□□ -1.83
TRM1YDR120C SPG5P42933 373 aa3.63□□□□□ -1.83
TRM1YDR120C RPA34P47006 233 aaPredicted RBP3.63□□□□□ -1.83
TRM1YDR120C MDE1P47095 244 aa3.63□□□□□ -1.83
TRM1YDR120C EFM3P47163 339 aa3.63□□□□□ -1.83
TRM1YDR120C LIF1P53150 421 aa3.63□□□□□ -1.83
TRM1YDR120C NBL1Q3E7Y6 73 aa3.63□□□□□ -1.83
TRM1YDR120C DAL2P25335 343 aa3.62□□□□□ -1.83
TRM1YDR120C KRR1P25586 316 aaPredicted RBP3.62□□□□□ -1.83
TRM1YDR120C SPT10P35208 640 aa3.62□□□□□ -1.83
TRM1YDR120C GPX2P38143 162 aa3.62□□□□□ -1.83
TRM1YDR120C YGR210CP42942 411 aa3.62□□□□□ -1.83
TRM1YDR120C FYV8P46949 817 aaKnown RBP3.62□□□□□ -1.83
TRM1YDR120C CUE3P53137 624 aaKnown RBP3.62□□□□□ -1.83
TRM1YDR120C AQR1P53943 586 aa3.62□□□□□ -1.83
TRM1YDR120C SUE1Q06524 206 aa3.62□□□□□ -1.83
TRM1YDR120C YPR078CQ06813 372 aa3.62□□□□□ -1.83
TRM1YDR120C FAB1P34756 2278 aa3.62□□□□□ -1.83
TRM1YDR120C MYO3P36006 1272 aa3.61□□□□□ -1.83
TRM1YDR120C PDR16P53860 351 aaKnown RBP3.61□□□□□ -1.83
TRM1YDR120C PET123P17558 318 aa3.61□□□□□ -1.83
TRM1YDR120C TVP23P38962 199 aa3.61□□□□□ -1.83
TRM1YDR120C LCB3P47013 409 aa3.61□□□□□ -1.83
TRM1YDR120C YJR085CP47131 105 aaKnown RBP3.61□□□□□ -1.83
TRM1YDR120C ABM1P47146 123 aa3.61□□□□□ -1.83
TRM1YDR120C RET3P53600 189 aa3.61□□□□□ -1.83
TRM1YDR120C MTQ1P53944 314 aa3.61□□□□□ -1.83
TRM1YDR120C PEX27Q08580 376 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms