RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C YSR3P23501 404 aa3.95□□□□□ -1.78
CDC9YDL164C RFA3P26755 122 aaKnown RBP3.95□□□□□ -1.78
CDC9YDL164C PRR1P28708 518 aa3.95□□□□□ -1.78
CDC9YDL164C UTR4P32626 227 aa3.95□□□□□ -1.78
CDC9YDL164C ECM15P35195 104 aa3.95□□□□□ -1.78
CDC9YDL164C EGD2P38879 174 aaKnown RBP3.95□□□□□ -1.78
CDC9YDL164C YFR057WP43625 151 aa3.95□□□□□ -1.78
CDC9YDL164C SEH1P53011 349 aaKnown RBP3.95□□□□□ -1.78
CDC9YDL164C ARK1P53974 638 aa3.95□□□□□ -1.78
CDC9YDL164C NUP100Q02629 959 aa3.95□□□□□ -1.78
CDC9YDL164C DIC1Q06143 298 aa3.95□□□□□ -1.78
CDC9YDL164C PBP4Q07362 185 aaKnown RBP3.95□□□□□ -1.78
CDC9YDL164C MCH4Q08268 501 aa3.95□□□□□ -1.78
CDC9YDL164C YLR108CQ12259 485 aa3.95□□□□□ -1.78
CDC9YDL164C GLT1Q12680 2145 aaKnown RBP3.95□□□□□ -1.78
CDC9YDL164C MKK1P32490 508 aa3.95□□□□□ -1.78
CDC9YDL164C MRPL6P32904 214 aa3.95□□□□□ -1.78
CDC9YDL164C DHH1P39517 506 aaKnown RBP3.95□□□□□ -1.78
CDC9YDL164C SHO1P40073 367 aa3.95□□□□□ -1.78
CDC9YDL164C POP1P41812 875 aa3.95□□□□□ -1.78
CDC9YDL164C AZR1P50080 613 aa3.95□□□□□ -1.78
CDC9YDL164C LST7P53237 242 aa3.95□□□□□ -1.78
CDC9YDL164C YIP3P53633 176 aa3.95□□□□□ -1.78
CDC9YDL164C YNL040WP53960 456 aaPredicted RBP3.95□□□□□ -1.78
CDC9YDL164C APM1Q00776 475 aaPredicted RBP3.95□□□□□ -1.78
CDC9YDL164C RNT1Q02555 471 aa3.95□□□□□ -1.78
CDC9YDL164C YPL080CQ02826 108 aa3.95□□□□□ -1.78
CDC9YDL164C MSS11Q03825 758 aa3.95□□□□□ -1.78
CDC9YDL164C TMA10Q06177 86 aa3.95□□□□□ -1.78
CDC9YDL164C MYO2P19524 1574 aaKnown RBP3.94□□□□□ -1.78
CDC9YDL164C ERG4P25340 473 aa3.94□□□□□ -1.78
CDC9YDL164C MRPL9P31334 269 aa3.94□□□□□ -1.78
CDC9YDL164C NPT1P39683 429 aaKnown RBP3.94□□□□□ -1.78
CDC9YDL164C SMB1P40018 196 aaKnown RBP3.94□□□□□ -1.78
CDC9YDL164C AIM24P47127 394 aa3.94□□□□□ -1.78
CDC9YDL164C MIG2P53035 382 aa3.94□□□□□ -1.78
CDC9YDL164C DUG3P53871 357 aa3.94□□□□□ -1.78
CDC9YDL164C CSM3Q04659 317 aa3.94□□□□□ -1.78
CDC9YDL164C FAR8Q05040 523 aa3.94□□□□□ -1.78
CDC9YDL164C SRL2Q12020 392 aa3.94□□□□□ -1.78
CDC9YDL164C BUD4P47136 1447 aa3.94□□□□□ -1.78
CDC9YDL164C PGK1P00560 416 aaKnown RBP3.93□□□□□ -1.78
CDC9YDL164C RPS13P05756 151 aaKnown RBP3.93□□□□□ -1.78
CDC9YDL164C MRP2P10663 115 aaPredicted RBP3.93□□□□□ -1.78
CDC9YDL164C YMR31P19955 123 aa3.93□□□□□ -1.78
CDC9YDL164C ERG9P29704 444 aa3.93□□□□□ -1.78
CDC9YDL164C IES6P32617 166 aa3.93□□□□□ -1.78
CDC9YDL164C PPZ2P33329 710 aa3.93□□□□□ -1.78
CDC9YDL164C ALG8P40351 577 aa3.93□□□□□ -1.78
CDC9YDL164C YKE4P40544 346 aa3.93□□□□□ -1.78
CDC9YDL164C SSN8P47821 323 aa3.93□□□□□ -1.78
CDC9YDL164C PCP1P53259 346 aa3.93□□□□□ -1.78
CDC9YDL164C PRP38Q00723 242 aaPredicted RBP3.93□□□□□ -1.78
CDC9YDL164C RVB1Q03940 463 aaKnown RBP3.93□□□□□ -1.78
CDC9YDL164C VIK1Q12045 647 aa3.93□□□□□ -1.78
CDC9YDL164C SRB8P25648 1427 aa3.93□□□□□ -1.78
CDC9YDL164C STU1P38198 1513 aa3.93□□□□□ -1.78
CDC9YDL164C PDR10P51533 1564 aa3.93□□□□□ -1.78
CDC9YDL164C RPL7AP05737 244 aaKnown RBP3.93□□□□□ -1.78
CDC9YDL164C ALG7P07286 448 aa3.93□□□□□ -1.78
CDC9YDL164C NAM2P11325 894 aa3.93□□□□□ -1.78
CDC9YDL164C COQ2P32378 372 aa3.93□□□□□ -1.78
CDC9YDL164C ROT2P38138 954 aa3.93□□□□□ -1.78
CDC9YDL164C GPX2P38143 162 aa3.93□□□□□ -1.78
CDC9YDL164C MRX3P38172 270 aa3.93□□□□□ -1.78
CDC9YDL164C PHO23P50947 330 aa3.93□□□□□ -1.78
CDC9YDL164C PXR1P53335 271 aaPredicted RBP3.93□□□□□ -1.78
CDC9YDL164C CTF19Q02732 369 aa3.93□□□□□ -1.78
CDC9YDL164C SLD5Q03406 294 aa3.93□□□□□ -1.78
CDC9YDL164C BNA5Q05979 453 aa3.93□□□□□ -1.78
CDC9YDL164C APC9Q12107 265 aa3.93□□□□□ -1.78
CDC9YDL164C RPL7BQ12213 244 aaKnown RBP3.93□□□□□ -1.78
CDC9YDL164C RRI1Q12468 440 aa3.93□□□□□ -1.78
CDC9YDL164C NCB2Q92317 146 aa3.93□□□□□ -1.78
CDC9YDL164C SSC1P0CS90 654 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C HPR1P17629 752 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C DAL82P21705 255 aa3.92□□□□□ -1.78
CDC9YDL164C PUT3P25502 979 aaPredicted RBP3.92□□□□□ -1.78
CDC9YDL164C VPS21P36017 210 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C KAE1P36132 386 aa3.92□□□□□ -1.78
CDC9YDL164C FRT2P39734 528 aa3.92□□□□□ -1.78
CDC9YDL164C ASN1P49089 572 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C ALG11P53954 548 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C LOA1Q06508 300 aa3.92□□□□□ -1.78
CDC9YDL164C SKI7Q08491 747 aaPredicted RBP3.92□□□□□ -1.78
CDC9YDL164C YRA1Q12159 226 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C SET6Q12529 373 aa3.92□□□□□ -1.78
CDC9YDL164C RAD7P06779 565 aa3.92□□□□□ -1.78
CDC9YDL164C TUB1P09733 447 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C AQY1P0CD91 305 aa3.92□□□□□ -1.78
CDC9YDL164C VPS1P21576 704 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C GAS1P22146 559 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C COQ3P27680 312 aa3.92□□□□□ -1.78
CDC9YDL164C POP5P28005 173 aa3.92□□□□□ -1.78
CDC9YDL164C VMA5P31412 392 aaKnown RBP3.92□□□□□ -1.78
CDC9YDL164C FLO10P36170 1169 aa3.92□□□□□ -1.78
CDC9YDL164C YBR096WP38256 230 aa3.92□□□□□ -1.78
CDC9YDL164C FAA2P39518 744 aa3.92□□□□□ -1.78
CDC9YDL164C FHL1P39521 936 aa3.92□□□□□ -1.78
CDC9YDL164C PHO90P39535 881 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms