RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C CWC21Q03375 135 aaKnown RBP3.88□□□□□ -1.79
NPL4YBR170C YLR173WQ06247 608 aa3.88□□□□□ -1.79
NPL4YBR170C YOL107WQ12239 342 aa3.88□□□□□ -1.79
NPL4YBR170C YCR043CP25361 127 aa3.87□□□□□ -1.79
NPL4YBR170C CSM1P25651 190 aa3.87□□□□□ -1.79
NPL4YBR170C SEC1P30619 724 aaKnown RBP3.87□□□□□ -1.79
NPL4YBR170C NAT2P37293 288 aa3.87□□□□□ -1.79
NPL4YBR170C SBE22P38814 852 aa3.87□□□□□ -1.79
NPL4YBR170C CTM1P38818 585 aa3.87□□□□□ -1.79
NPL4YBR170C YHR182WP38870 785 aa3.87□□□□□ -1.79
NPL4YBR170C MET30P39014 640 aa3.87□□□□□ -1.79
NPL4YBR170C YIL169CP40442 995 aa3.87□□□□□ -1.79
NPL4YBR170C SCW4P53334 386 aaKnown RBP3.87□□□□□ -1.79
NPL4YBR170C PXR1P53335 271 aaPredicted RBP3.87□□□□□ -1.79
NPL4YBR170C GOR1P53839 350 aa3.87□□□□□ -1.79
NPL4YBR170C IBD2P53892 351 aa3.87□□□□□ -1.79
NPL4YBR170C CSM3Q04659 317 aa3.87□□□□□ -1.79
NPL4YBR170C RRN11Q04712 507 aa3.87□□□□□ -1.79
NPL4YBR170C MDM36Q06820 579 aa3.87□□□□□ -1.79
NPL4YBR170C PRP46Q12417 451 aaPredicted RBP3.87□□□□□ -1.79
NPL4YBR170C CDC23P16522 626 aa3.87□□□□□ -1.79
NPL4YBR170C PTP1P25044 335 aa3.87□□□□□ -1.79
NPL4YBR170C DAL2P25335 343 aa3.87□□□□□ -1.79
NPL4YBR170C DCC1P25559 380 aa3.87□□□□□ -1.79
NPL4YBR170C ERG9P29704 444 aa3.87□□□□□ -1.79
NPL4YBR170C MUD1P32605 298 aaKnown RBP3.87□□□□□ -1.79
NPL4YBR170C MRP4P32902 394 aa3.87□□□□□ -1.79
NPL4YBR170C MTC6P38849 526 aa3.87□□□□□ -1.79
NPL4YBR170C TES1P41903 349 aaKnown RBP3.87□□□□□ -1.79
NPL4YBR170C TRF5P48561 642 aaKnown RBP3.87□□□□□ -1.79
NPL4YBR170C BIO3P50277 480 aa3.87□□□□□ -1.79
NPL4YBR170C BIO4P53630 237 aa3.87□□□□□ -1.79
NPL4YBR170C BOP2Q06150 570 aa3.87□□□□□ -1.79
NPL4YBR170C SAM4Q08985 325 aaKnown RBP3.87□□□□□ -1.79
NPL4YBR170C THP3Q12049 470 aaKnown RBP3.87□□□□□ -1.79
NPL4YBR170C SIA1Q12212 622 aa3.87□□□□□ -1.79
NPL4YBR170C YLR108CQ12259 485 aa3.87□□□□□ -1.79
NPL4YBR170C SET6Q12529 373 aa3.87□□□□□ -1.79
NPL4YBR170C RAD7P06779 565 aa3.86□□□□□ -1.79
NPL4YBR170C FRS2P15625 503 aaKnown RBP3.86□□□□□ -1.79
NPL4YBR170C ACB1P31787 87 aa3.86□□□□□ -1.79
NPL4YBR170C YKR015CP36111 568 aa3.86□□□□□ -1.79
NPL4YBR170C YBP1P38315 674 aa3.86□□□□□ -1.79
NPL4YBR170C MMS21P38632 267 aa3.86□□□□□ -1.79
NPL4YBR170C RPH1P39956 796 aa3.86□□□□□ -1.79
NPL4YBR170C OKP1P53298 406 aa3.86□□□□□ -1.79
NPL4YBR170C MKC7P53379 596 aa3.86□□□□□ -1.79
NPL4YBR170C YNL134CP53912 376 aaKnown RBP3.86□□□□□ -1.79
NPL4YBR170C YMR102CQ03177 834 aa3.86□□□□□ -1.79
NPL4YBR170C SNA4Q07549 140 aa3.86□□□□□ -1.79
NPL4YBR170C ALE1Q08548 619 aa3.86□□□□□ -1.79
NPL4YBR170C SLF1Q12034 447 aaKnown RBP3.86□□□□□ -1.79
NPL4YBR170C RBD2Q12270 262 aa3.86□□□□□ -1.79
NPL4YBR170C HIS2P38635 335 aa3.85□□□□□ -1.79
NPL4YBR170C YPT35P38815 214 aaKnown RBP3.85□□□□□ -1.79
NPL4YBR170C COX14P39103 70 aa3.85□□□□□ -1.79
NPL4YBR170C COX16P47081 118 aa3.85□□□□□ -1.79
NPL4YBR170C NDE2Q07500 545 aa3.85□□□□□ -1.79
NPL4YBR170C MED4Q12343 284 aa3.85□□□□□ -1.79
NPL4YBR170C YCR024C-BQ3E7Z8 88 aa3.85□□□□□ -1.79
NPL4YBR170C MEX67Q99257 599 aaKnown RBP3.85□□□□□ -1.79
NPL4YBR170C UBA3Q99344 299 aa3.85□□□□□ -1.79
NPL4YBR170C NTG1P31378 399 aa3.84□□□□□ -1.79
NPL4YBR170C DPH5P32469 300 aaPredicted RBP3.84□□□□□ -1.79
NPL4YBR170C TAE1P38340 232 aa3.84□□□□□ -1.79
NPL4YBR170C CTK3P46963 296 aaPredicted RBP3.84□□□□□ -1.79
NPL4YBR170C YJR030CP47101 745 aa3.84□□□□□ -1.79
NPL4YBR170C AIM24P47127 394 aa3.84□□□□□ -1.79
NPL4YBR170C COS10P52924 374 aa3.84□□□□□ -1.79
NPL4YBR170C SPP2Q02521 185 aa3.84□□□□□ -1.79
NPL4YBR170C TLG1Q03322 224 aa3.84□□□□□ -1.79
NPL4YBR170C DAP1Q12091 152 aa3.84□□□□□ -1.79
NPL4YBR170C MSF1P08425 469 aa3.84□□□□□ -1.8
NPL4YBR170C RBK1P25332 333 aa3.84□□□□□ -1.8
NPL4YBR170C IMP3P32899 183 aaPredicted RBP3.84□□□□□ -1.8
NPL4YBR170C MRM2P53123 320 aa3.84□□□□□ -1.8
NPL4YBR170C GPN3Q06543 272 aa3.84□□□□□ -1.8
NPL4YBR170C PBP4Q07362 185 aaKnown RBP3.84□□□□□ -1.8
NPL4YBR170C TDH3P00359 332 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
NPL4YBR170C CPR1P14832 162 aaKnown RBP3.83□□□□□ -1.8
NPL4YBR170C POL30P15873 258 aaKnown RBP3.83□□□□□ -1.8
NPL4YBR170C COS9P36034 407 aa3.83□□□□□ -1.8
NPL4YBR170C DTR1P38125 572 aa3.83□□□□□ -1.8
NPL4YBR170C YHR045WP38775 560 aa3.83□□□□□ -1.8
NPL4YBR170C FHL1P39521 936 aa3.83□□□□□ -1.8
NPL4YBR170C SLM1P40485 686 aa3.83□□□□□ -1.8
NPL4YBR170C YFL040WP43562 540 aa3.83□□□□□ -1.8
NPL4YBR170C SEH1P53011 349 aaKnown RBP3.83□□□□□ -1.8
NPL4YBR170C SCS3P53012 380 aa3.83□□□□□ -1.8
NPL4YBR170C YPL080CQ02826 108 aa3.83□□□□□ -1.8
NPL4YBR170C COX20Q04935 205 aa3.83□□□□□ -1.8
NPL4YBR170C SRL1Q08673 210 aa3.83□□□□□ -1.8
NPL4YBR170C YPQ1Q12010 308 aa3.83□□□□□ -1.8
NPL4YBR170C YRM1Q12340 786 aa3.83□□□□□ -1.8
NPL4YBR170C CYC3P06182 269 aa3.82□□□□□ -1.8
NPL4YBR170C HEM15P16622 393 aa3.82□□□□□ -1.8
NPL4YBR170C POP5P28005 173 aa3.82□□□□□ -1.8
NPL4YBR170C RAD5P32849 1169 aaPredicted RBP3.82□□□□□ -1.8
NPL4YBR170C DED81P38707 554 aaKnown RBP3.82□□□□□ -1.8
NPL4YBR170C SMF2P38778 549 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms