RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W XDJ1P39102 459 aa3.51□□□□□ -1.85
SWI1YPL016W MNP1P53163 194 aaPredicted RBP3.51□□□□□ -1.85
SWI1YPL016W MEP3P53390 489 aa3.51□□□□□ -1.85
SWI1YPL016W YNR014WP53719 212 aa3.51□□□□□ -1.85
SWI1YPL016W EGD1Q02642 157 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W YPL071CQ02864 156 aa3.51□□□□□ -1.85
SWI1YPL016W RLI1Q03195 608 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W ECM30Q06673 1274 aa3.51□□□□□ -1.85
SWI1YPL016W CET1O13297 549 aaPredicted RBP3.51□□□□□ -1.85
SWI1YPL016W YBR085C-AO43137 85 aa3.51□□□□□ -1.85
SWI1YPL016W CPR1P14832 162 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W SIP1P32578 815 aa3.51□□□□□ -1.85
SWI1YPL016W AIM26P32858 118 aa3.51□□□□□ -1.85
SWI1YPL016W GPT2P36148 743 aa3.51□□□□□ -1.85
SWI1YPL016W LOC1P43586 204 aaPredicted RBP3.51□□□□□ -1.85
SWI1YPL016W SPO74P45819 413 aa3.51□□□□□ -1.85
SWI1YPL016W MPC1P53157 130 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W ERV29P53337 310 aa3.51□□□□□ -1.85
SWI1YPL016W MKC7P53379 596 aa3.51□□□□□ -1.85
SWI1YPL016W YDC1Q02896 317 aa3.51□□□□□ -1.85
SWI1YPL016W APC4Q04601 652 aa3.51□□□□□ -1.85
SWI1YPL016W YPR147CQ06522 304 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W SSK1Q07084 712 aa3.51□□□□□ -1.85
SWI1YPL016W GAS5Q08193 484 aa3.51□□□□□ -1.85
SWI1YPL016W CRT10Q08226 957 aa3.51□□□□□ -1.85
SWI1YPL016W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
SWI1YPL016W LPX1Q12405 387 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W TRX1P22217 103 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W VBA5P36172 582 aa3.51□□□□□ -1.85
SWI1YPL016W YBR259WP38338 688 aa3.51□□□□□ -1.85
SWI1YPL016W YGR053CP53234 283 aa3.51□□□□□ -1.85
SWI1YPL016W ATF2P53296 535 aa3.51□□□□□ -1.85
SWI1YPL016W GPI1P53306 609 aa3.51□□□□□ -1.85
SWI1YPL016W MRPL22P53881 309 aa3.51□□□□□ -1.85
SWI1YPL016W SLM2P53955 656 aa3.51□□□□□ -1.85
SWI1YPL016W IDP3P53982 420 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W ACT1P60010 375 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W UPC2Q12151 913 aa3.51□□□□□ -1.85
SWI1YPL016W AIM7Q12156 149 aa3.51□□□□□ -1.85
SWI1YPL016W RBD2Q12270 262 aa3.51□□□□□ -1.85
SWI1YPL016W PET54P10834 293 aa3.51□□□□□ -1.85
SWI1YPL016W NDC1P32500 655 aa3.51□□□□□ -1.85
SWI1YPL016W ATG12P38316 186 aa3.51□□□□□ -1.85
SWI1YPL016W URA8P38627 578 aaPredicted RBP3.51□□□□□ -1.85
SWI1YPL016W FAD1P38913 306 aa3.51□□□□□ -1.85
SWI1YPL016W GIP2P40036 548 aa3.51□□□□□ -1.85
SWI1YPL016W BUD13P46947 266 aaPredicted RBP3.51□□□□□ -1.85
SWI1YPL016W CLA4P48562 842 aa3.51□□□□□ -1.85
SWI1YPL016W CUL3P53202 744 aa3.51□□□□□ -1.85
SWI1YPL016W YPR003CP53394 754 aa3.51□□□□□ -1.85
SWI1YPL016W DIA1P54005 336 aa3.51□□□□□ -1.85
SWI1YPL016W PRM15Q03262 622 aa3.51□□□□□ -1.85
SWI1YPL016W CGI121Q03705 181 aaKnown RBP3.51□□□□□ -1.85
SWI1YPL016W ATG20Q07528 640 aa3.51□□□□□ -1.85
SWI1YPL016W AIM39Q08223 395 aa3.51□□□□□ -1.85
SWI1YPL016W VAM3Q12241 283 aa3.51□□□□□ -1.85
SWI1YPL016W MDM12Q92328 271 aa3.51□□□□□ -1.85
SWI1YPL016W HTB1P02293 131 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W HTB2P02294 131 aa3.5□□□□□ -1.85
SWI1YPL016W CAP2P13517 287 aa3.5□□□□□ -1.85
SWI1YPL016W IMG2P25642 146 aaPredicted RBP3.5□□□□□ -1.85
SWI1YPL016W DEG1P31115 442 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W HMT1P38074 348 aa3.5□□□□□ -1.85
SWI1YPL016W ROT2P38138 954 aa3.5□□□□□ -1.85
SWI1YPL016W ELO3P40319 345 aa3.5□□□□□ -1.85
SWI1YPL016W LSB3P43603 459 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W MRX5P47007 382 aa3.5□□□□□ -1.85
SWI1YPL016W RSM7P47150 247 aa3.5□□□□□ -1.85
SWI1YPL016W VPS73P53142 486 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W SNU56Q03782 492 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W TY1A-MR1Q04215 440 aa3.5□□□□□ -1.85
SWI1YPL016W BOP2Q06150 570 aa3.5□□□□□ -1.85
SWI1YPL016W SDO1Q07953 250 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W YDL176WQ12027 708 aa3.5□□□□□ -1.85
SWI1YPL016W SMF3Q12078 473 aaPredicted RBP3.5□□□□□ -1.85
SWI1YPL016W YPL066WQ12194 479 aa3.5□□□□□ -1.85
SWI1YPL016W GAL4P04386 881 aa3.5□□□□□ -1.85
SWI1YPL016W ERG4P25340 473 aa3.5□□□□□ -1.85
SWI1YPL016W PPZ1P26570 692 aa3.5□□□□□ -1.85
SWI1YPL016W PIN4P34217 668 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SWI1YPL016W TMA108P40462 946 aa3.5□□□□□ -1.85
SWI1YPL016W YIP4P53093 235 aa3.5□□□□□ -1.85
SWI1YPL016W GUP1P53154 560 aa3.5□□□□□ -1.85
SWI1YPL016W SGF73P53165 657 aa3.5□□□□□ -1.85
SWI1YPL016W YGR079WP53249 370 aa3.5□□□□□ -1.85
SWI1YPL016W AAH1P53909 347 aa3.5□□□□□ -1.85
SWI1YPL016W SKO1Q02100 647 aa3.5□□□□□ -1.85
SWI1YPL016W MRPS16Q02608 121 aa3.5□□□□□ -1.85
SWI1YPL016W GRS2Q06817 618 aa3.5□□□□□ -1.85
SWI1YPL016W TY1A-BLQ12266 440 aa3.5□□□□□ -1.85
SWI1YPL016W MED11Q99278 115 aa3.5□□□□□ -1.85
SWI1YPL016W REP2P03872 296 aa3.5□□□□□ -1.85
SWI1YPL016W FUM1P08417 488 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W YOL163WP0CF20 169 aa3.5□□□□□ -1.85
SWI1YPL016W SCL1P21243 252 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W PRE7P23724 241 aaKnown RBP3.5□□□□□ -1.85
SWI1YPL016W IMG1P25626 169 aa3.5□□□□□ -1.85
SWI1YPL016W CDC50P25656 391 aa3.5□□□□□ -1.85
SWI1YPL016W PHO91P27514 894 aa3.5□□□□□ -1.85
SWI1YPL016W SFC1P33303 322 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms