RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W AIM20P40451 204 aa3.24□□□□□ -1.89
VPS17YOR132W INA22P40576 216 aa3.24□□□□□ -1.89
VPS17YOR132W RPC17P47076 161 aa3.24□□□□□ -1.89
VPS17YOR132W EAF6P47128 113 aa3.24□□□□□ -1.89
VPS17YOR132W MPP6P53725 186 aaPredicted RBP3.24□□□□□ -1.89
VPS17YOR132W TAF9Q05027 157 aa3.24□□□□□ -1.89
VPS17YOR132W NDL1Q06568 189 aa3.24□□□□□ -1.89
VPS17YOR132W VAM3Q12241 283 aa3.24□□□□□ -1.89
VPS17YOR132W RBD2Q12270 262 aa3.24□□□□□ -1.89
VPS17YOR132W YMR230W-AQ3E7B5 62 aa3.24□□□□□ -1.89
VPS17YOR132W MTR10Q99189 972 aa3.24□□□□□ -1.89
VPS17YOR132W PDE2P06776 526 aa3.24□□□□□ -1.89
VPS17YOR132W PRB1P09232 635 aa3.24□□□□□ -1.89
VPS17YOR132W PMR1P13586 950 aa3.24□□□□□ -1.89
VPS17YOR132W SRV2P17555 526 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W RPB4P20433 221 aaPredicted RBP3.24□□□□□ -1.89
VPS17YOR132W PET18P25362 215 aa3.24□□□□□ -1.89
VPS17YOR132W ARC19P33204 171 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W YNK1P36010 153 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W ASC1P38011 319 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W OLA1P38219 394 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W YBR062CP38239 180 aa3.24□□□□□ -1.89
VPS17YOR132W FKS1P38631 1876 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W GCN20P43535 752 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W YGL185CP53100 379 aa3.24□□□□□ -1.89
VPS17YOR132W YGL039WP53183 348 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W SMM1P53720 384 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W KTR5P53966 522 aaPredicted RBP3.24□□□□□ -1.89
VPS17YOR132W SAM50P53969 484 aa3.24□□□□□ -1.89
VPS17YOR132W YVH1Q02256 364 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W TSR1Q07381 788 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W DIS3Q08162 1001 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W MED2Q12124 431 aa3.24□□□□□ -1.89
VPS17YOR132W RIO1Q12196 484 aaKnown RBP3.24□□□□□ -1.89
VPS17YOR132W YRM1Q12340 786 aa3.24□□□□□ -1.89
VPS17YOR132W YOR012WQ12351 137 aa3.24□□□□□ -1.89
VPS17YOR132W YLR462WO13556 202 aa3.23□□□□□ -1.89
VPS17YOR132W LEU4P06208 619 aaKnown RBP3.23□□□□□ -1.89
VPS17YOR132W ARG80P07249 177 aa3.23□□□□□ -1.89
VPS17YOR132W SAM1P10659 382 aaKnown RBP3.23□□□□□ -1.89
VPS17YOR132W PEP5P12868 1029 aa3.23□□□□□ -1.89
VPS17YOR132W CLN3P13365 580 aa3.23□□□□□ -1.89
VPS17YOR132W CDC10P25342 322 aaKnown RBP3.23□□□□□ -1.89
VPS17YOR132W GEX1P25596 615 aa3.23□□□□□ -1.89
VPS17YOR132W UBC6P33296 250 aaPredicted RBP3.23□□□□□ -1.89
VPS17YOR132W ARA1P38115 344 aa3.23□□□□□ -1.89
VPS17YOR132W MMS21P38632 267 aa3.23□□□□□ -1.89
VPS17YOR132W YHL049CP38722 271 aa3.23□□□□□ -1.89
VPS17YOR132W END3P39013 349 aa3.23□□□□□ -1.89
VPS17YOR132W YEL075CP39972 122 aa3.23□□□□□ -1.89
VPS17YOR132W SCC4P40090 624 aa3.23□□□□□ -1.89
VPS17YOR132W YER189WP40104 122 aa3.23□□□□□ -1.89
VPS17YOR132W YFL064CP43540 174 aa3.23□□□□□ -1.89
VPS17YOR132W AIM22P47051 409 aa3.23□□□□□ -1.89
VPS17YOR132W ZPR1P53303 486 aaKnown RBP3.23□□□□□ -1.89
VPS17YOR132W MNT4P53745 580 aa3.23□□□□□ -1.89
VPS17YOR132W DUG3P53871 357 aa3.23□□□□□ -1.89
VPS17YOR132W MSC1Q03104 513 aa3.23□□□□□ -1.89
VPS17YOR132W RTT103Q05543 409 aa3.23□□□□□ -1.89
VPS17YOR132W DIC1Q06143 298 aa3.23□□□□□ -1.89
VPS17YOR132W BOP2Q06150 570 aa3.23□□□□□ -1.89
VPS17YOR132W YLR177WQ06251 628 aa3.23□□□□□ -1.89
VPS17YOR132W MDM36Q06820 579 aa3.23□□□□□ -1.89
VPS17YOR132W YBL111CQ3E7Y5 667 aa3.23□□□□□ -1.89
VPS17YOR132W SPS4P09937 338 aa3.22□□□□□ -1.89
VPS17YOR132W RNA1P11745 407 aaKnown RBP3.22□□□□□ -1.89
VPS17YOR132W GAL3P13045 520 aa3.22□□□□□ -1.89
VPS17YOR132W CBF1P17106 351 aa3.22□□□□□ -1.89
VPS17YOR132W UGA1P17649 471 aa3.22□□□□□ -1.89
VPS17YOR132W SEC62P21825 274 aa3.22□□□□□ -1.89
VPS17YOR132W VPS3P23643 1011 aa3.22□□□□□ -1.89
VPS17YOR132W RAD14P28519 371 aa3.22□□□□□ -1.89
VPS17YOR132W RIM1P32445 135 aaKnown RBP3.22□□□□□ -1.89
VPS17YOR132W RPL32P38061 130 aaKnown RBP3.22□□□□□ -1.89
VPS17YOR132W PHO88P38264 188 aaPredicted RBP3.22□□□□□ -1.89
VPS17YOR132W PCA1P38360 1216 aa3.22□□□□□ -1.89
VPS17YOR132W HIS2P38635 335 aa3.22□□□□□ -1.89
VPS17YOR132W GTO1P48239 356 aa3.22□□□□□ -1.89
VPS17YOR132W MND1P53102 219 aa3.22□□□□□ -1.89
VPS17YOR132W TIM8P57744 87 aa3.22□□□□□ -1.89
VPS17YOR132W RHO4Q00246 291 aa3.22□□□□□ -1.89
VPS17YOR132W YPL014WQ02606 381 aa3.22□□□□□ -1.89
VPS17YOR132W SPO19Q03029 223 aa3.22□□□□□ -1.89
VPS17YOR132W ATC1Q04005 294 aa3.22□□□□□ -1.89
VPS17YOR132W GLO2Q05584 274 aa3.22□□□□□ -1.89
VPS17YOR132W YLL007CQ07799 665 aa3.22□□□□□ -1.89
VPS17YOR132W THI20Q08224 551 aa3.22□□□□□ -1.89
VPS17YOR132W NCA2Q12374 616 aa3.22□□□□□ -1.89
VPS17YOR132W COX3P00420 269 aa3.21□□□□□ -1.9
VPS17YOR132W SSA3P09435 649 aaKnown RBP3.21□□□□□ -1.9
VPS17YOR132W RPS2P25443 254 aaKnown RBP3.21□□□□□ -1.9
VPS17YOR132W YCL068CP25593 260 aa3.21□□□□□ -1.9
VPS17YOR132W ASF2P32448 525 aaPredicted RBP3.21□□□□□ -1.9
VPS17YOR132W KRE6P32486 720 aa3.21□□□□□ -1.9
VPS17YOR132W YSC83P32792 385 aa3.21□□□□□ -1.9
VPS17YOR132W LOS1P33418 1100 aaPredicted RBP3.21□□□□□ -1.9
VPS17YOR132W KKQ8P36004 724 aa3.21□□□□□ -1.9
VPS17YOR132W SWC5P38326 303 aa3.21□□□□□ -1.9
VPS17YOR132W MNL1P38888 796 aa3.21□□□□□ -1.9
VPS17YOR132W YHR210CP38893 341 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms