RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C LDS2Q08218 356 aa3.3□□□□□ -1.88
PML39YML107C AAD15Q08361 143 aa3.3□□□□□ -1.88
PML39YML107C YDR061WQ12298 539 aa3.3□□□□□ -1.88
PML39YML107C CHD1P32657 1468 aa3.29□□□□□ -1.88
PML39YML107C RPL6BP05739 176 aaKnown RBP3.29□□□□□ -1.88
PML39YML107C UTH1P36135 365 aa3.29□□□□□ -1.88
PML39YML107C GEP4P38812 185 aa3.29□□□□□ -1.88
PML39YML107C EPL1P43572 832 aa3.29□□□□□ -1.88
PML39YML107C RPL6AQ02326 176 aaKnown RBP3.29□□□□□ -1.88
PML39YML107C YMR010WQ03687 405 aa3.29□□□□□ -1.88
PML39YML107C YPR091CQ06833 770 aa3.29□□□□□ -1.88
PML39YML107C SRN2Q99176 213 aa3.29□□□□□ -1.88
PML39YML107C VPS15P22219 1454 aa3.28□□□□□ -1.88
PML39YML107C YPK9Q12697 1472 aa3.28□□□□□ -1.88
PML39YML107C DNF3Q12674 1656 aa3.28□□□□□ -1.88
PML39YML107C HXT1P32465 570 aa3.28□□□□□ -1.88
PML39YML107C SPP381P38282 291 aaPredicted RBP3.28□□□□□ -1.88
PML39YML107C PMT5P52867 743 aa3.28□□□□□ -1.88
PML39YML107C RCF1Q03713 159 aa3.28□□□□□ -1.88
PML39YML107C FCY22Q12119 530 aa3.28□□□□□ -1.88
PML39YML107C PCL9Q12477 304 aa3.28□□□□□ -1.88
PML39YML107C NAG1Q8TGN9 163 aa3.28□□□□□ -1.88
PML39YML107C TOR1P35169 2470 aa3.27□□□□□ -1.89
PML39YML107C IES6P32617 166 aa3.27□□□□□ -1.89
PML39YML107C PRS1P32895 427 aaKnown RBP3.27□□□□□ -1.89
PML39YML107C GPX2P38143 162 aa3.27□□□□□ -1.89
PML39YML107C DED81P38707 554 aaKnown RBP3.27□□□□□ -1.89
PML39YML107C MLH1P38920 769 aa3.27□□□□□ -1.89
PML39YML107C ATG18P43601 500 aa3.27□□□□□ -1.89
PML39YML107C BNS1P50084 137 aa3.27□□□□□ -1.89
PML39YML107C MLC1P53141 149 aa3.27□□□□□ -1.89
PML39YML107C COS1P53822 381 aa3.27□□□□□ -1.89
PML39YML107C YET2Q04210 160 aa3.27□□□□□ -1.89
PML39YML107C IPK1Q06667 281 aa3.27□□□□□ -1.89
PML39YML107C RRP7P25368 297 aaPredicted RBP3.26□□□□□ -1.89
PML39YML107C RXT2P38255 430 aa3.26□□□□□ -1.89
PML39YML107C TOS2P50078 622 aa3.26□□□□□ -1.89
PML39YML107C YDL114WQ07530 308 aa3.26□□□□□ -1.89
PML39YML107C MEX67Q99257 599 aaKnown RBP3.26□□□□□ -1.89
PML39YML107C CDC50P25656 391 aa3.25□□□□□ -1.89
PML39YML107C TIR2P33890 251 aa3.25□□□□□ -1.89
PML39YML107C YBL028CP38202 106 aa3.25□□□□□ -1.89
PML39YML107C GDT1P38301 280 aaPredicted RBP3.25□□□□□ -1.89
PML39YML107C AIP1P46680 615 aaKnown RBP3.25□□□□□ -1.89
PML39YML107C RRN9P53437 365 aa3.25□□□□□ -1.89
PML39YML107C PDR10P51533 1564 aa3.25□□□□□ -1.89
PML39YML107C NAT1P12945 854 aaKnown RBP3.24□□□□□ -1.89
PML39YML107C HSP26P15992 214 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
PML39YML107C PUP2P32379 260 aa3.24□□□□□ -1.89
PML39YML107C BAT1P38891 393 aaKnown RBP3.24□□□□□ -1.89
PML39YML107C PTI1P39927 425 aaPredicted RBP3.24□□□□□ -1.89
PML39YML107C MFG1Q07684 458 aa3.24□□□□□ -1.89
PML39YML107C HMS1Q12398 434 aa3.24□□□□□ -1.89
PML39YML107C HSP82P02829 709 aaKnown RBP3.23□□□□□ -1.89
PML39YML107C RNA1P11745 407 aaKnown RBP3.23□□□□□ -1.89
PML39YML107C SEC27P41811 889 aaKnown RBP3.23□□□□□ -1.89
PML39YML107C EOS1P53938 366 aa3.23□□□□□ -1.89
PML39YML107C YFH1Q07540 174 aa3.23□□□□□ -1.89
PML39YML107C TFB5Q3E7C1 72 aaPredicted RBP3.23□□□□□ -1.89
PML39YML107C MRPL8P22353 238 aa3.22□□□□□ -1.89
PML39YML107C FUN26P31381 517 aa3.22□□□□□ -1.89
PML39YML107C SPO23P33757 523 aa3.22□□□□□ -1.89
PML39YML107C ANR2P36090 516 aaPredicted RBP3.22□□□□□ -1.89
PML39YML107C OM14P38325 134 aa3.22□□□□□ -1.89
PML39YML107C YHR177WP38867 453 aa3.22□□□□□ -1.89
PML39YML107C YER186CP40101 306 aa3.22□□□□□ -1.89
PML39YML107C TRF5P48561 642 aaKnown RBP3.22□□□□□ -1.89
PML39YML107C MKC7P53379 596 aa3.22□□□□□ -1.89
PML39YML107C REX2P54964 269 aaKnown RBP3.22□□□□□ -1.89
PML39YML107C SKI8Q02793 397 aaPredicted RBP3.22□□□□□ -1.89
PML39YML107C TSA2Q04120 196 aa3.22□□□□□ -1.89
PML39YML107C PEX27Q08580 376 aa3.22□□□□□ -1.89
PML39YML107C YDL199CQ12407 687 aa3.22□□□□□ -1.89
PML39YML107C SOD1P00445 154 aaKnown RBP3.21□□□□□ -1.9
PML39YML107C PFS1P38872 237 aa3.21□□□□□ -1.9
PML39YML107C SNL1P40548 159 aa3.21□□□□□ -1.9
PML39YML107C BSC6Q08280 497 aa3.21□□□□□ -1.9
PML39YML107C PSK1P31374 1356 aa3.21□□□□□ -1.9
PML39YML107C PAN1P32521 1480 aa3.21□□□□□ -1.9
PML39YML107C UFD4P33202 1483 aa3.21□□□□□ -1.9
PML39YML107C COX4P04037 155 aa3.2□□□□□ -1.9
PML39YML107C RPS18AP0CX55 146 aaKnown RBP3.2□□□□□ -1.9
PML39YML107C RPS18BP0CX56 146 aaPredicted RBP3.2□□□□□ -1.9
PML39YML107C ZRC1P20107 442 aa3.2□□□□□ -1.9
PML39YML107C MSP1P28737 362 aa3.2□□□□□ -1.9
PML39YML107C TOA2P32774 122 aa3.2□□□□□ -1.9
PML39YML107C DAD2P36162 133 aa3.2□□□□□ -1.9
PML39YML107C MRP21P38175 177 aa3.2□□□□□ -1.9
PML39YML107C GPI18P38211 433 aa3.2□□□□□ -1.9
PML39YML107C TIM17P39515 158 aa3.2□□□□□ -1.9
PML39YML107C CWC22P53333 577 aaKnown RBP3.2□□□□□ -1.9
PML39YML107C NOP6Q07623 225 aaKnown RBP3.2□□□□□ -1.9
PML39YML107C FRE6Q12473 712 aa3.2□□□□□ -1.9
PML39YML107C NUP170P38181 1502 aa3.19□□□□□ -1.9
PML39YML107C ESP1Q03018 1630 aa3.19□□□□□ -1.9
PML39YML107C PRB1P09232 635 aa3.19□□□□□ -1.9
PML39YML107C RPL16AP26784 199 aaKnown RBP3.19□□□□□ -1.9
PML39YML107C DEP1P31385 405 aa3.19□□□□□ -1.9
PML39YML107C TOA1P32773 286 aa3.19□□□□□ -1.9
PML39YML107C MID2P36027 376 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms