RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C SNA4Q07549 140 aa1.18□□□□□ -2.22
NUP188YML103C AHC1Q12433 566 aa1.18□□□□□ -2.22
NUP188YML103C IFM1P25038 676 aa1.18□□□□□ -2.22
NUP188YML103C YCR043CP25361 127 aa1.18□□□□□ -2.22
NUP188YML103C PPZ1P26570 692 aa1.18□□□□□ -2.22
NUP188YML103C RTC2P38279 296 aa1.18□□□□□ -2.22
NUP188YML103C YHR035WP38769 630 aa1.18□□□□□ -2.22
NUP188YML103C GEP4P38812 185 aa1.18□□□□□ -2.22
NUP188YML103C YFR018CP43599 363 aa1.18□□□□□ -2.22
NUP188YML103C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
NUP188YML103C PIR3Q03180 325 aa1.18□□□□□ -2.22
NUP188YML103C ERV41Q04651 352 aa1.18□□□□□ -2.22
NUP188YML103C YMR034CQ05131 434 aaPredicted RBP1.18□□□□□ -2.22
NUP188YML103C HNT3Q08702 217 aa1.18□□□□□ -2.22
NUP188YML103C SNX3Q08826 162 aaKnown RBP1.18□□□□□ -2.22
NUP188YML103C YPR022CQ12139 1133 aa1.18□□□□□ -2.22
NUP188YML103C SIA1Q12212 622 aa1.18□□□□□ -2.22
NUP188YML103C ICT1Q12385 394 aa1.18□□□□□ -2.22
NUP188YML103C IZH4Q99393 312 aa1.18□□□□□ -2.22
NUP188YML103C GAL3P13045 520 aa1.18□□□□□ -2.22
NUP188YML103C DAL2P25335 343 aa1.18□□□□□ -2.22
NUP188YML103C RIB7P33312 244 aa1.18□□□□□ -2.22
NUP188YML103C DHH1P39517 506 aaKnown RBP1.18□□□□□ -2.22
NUP188YML103C JLP2P40206 208 aa1.18□□□□□ -2.22
NUP188YML103C NAS2P40555 220 aa1.18□□□□□ -2.22
NUP188YML103C YGR210CP42942 411 aa1.18□□□□□ -2.22
NUP188YML103C RRT5P43607 289 aa1.18□□□□□ -2.22
NUP188YML103C BER1Q06688 274 aaKnown RBP1.18□□□□□ -2.22
NUP188YML103C DEP1P31385 405 aa1.18□□□□□ -2.22
NUP188YML103C ALP1P38971 573 aa1.18□□□□□ -2.22
NUP188YML103C YND1P40009 630 aa1.18□□□□□ -2.22
NUP188YML103C REE1P40893 198 aa1.18□□□□□ -2.22
NUP188YML103C YFR057WP43625 151 aa1.18□□□□□ -2.22
NUP188YML103C GTO1P48239 356 aa1.18□□□□□ -2.22
NUP188YML103C TRF5P48561 642 aaKnown RBP1.18□□□□□ -2.22
NUP188YML103C SWC4P53201 476 aa1.18□□□□□ -2.22
NUP188YML103C RRN5Q02983 363 aa1.18□□□□□ -2.22
NUP188YML103C YLR413WQ06689 675 aa1.18□□□□□ -2.22
NUP188YML103C YGK3Q12222 375 aaPredicted RBP1.18□□□□□ -2.22
NUP188YML103C YBR298C-AQ8TGK4 73 aa1.18□□□□□ -2.22
NUP188YML103C CPR1P14832 162 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C SAM2P19358 384 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C RNA14P25298 677 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C ZIP1P31111 875 aa1.17□□□□□ -2.22
NUP188YML103C SMF2P38778 549 aa1.17□□□□□ -2.22
NUP188YML103C MEP1P40260 492 aa1.17□□□□□ -2.22
NUP188YML103C HCH1P53834 153 aa1.17□□□□□ -2.22
NUP188YML103C VTI1Q04338 217 aa1.17□□□□□ -2.22
NUP188YML103C GPN3Q06543 272 aa1.17□□□□□ -2.22
NUP188YML103C DNL4Q08387 944 aaPredicted RBP1.17□□□□□ -2.22
NUP188YML103C AYT1Q12226 474 aa1.17□□□□□ -2.22
NUP188YML103C STE3P06783 470 aa1.17□□□□□ -2.22
NUP188YML103C RPL42AP0CX27 106 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C RPL42BP0CX28 106 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C CAP2P13517 287 aa1.17□□□□□ -2.22
NUP188YML103C UGA1P17649 471 aa1.17□□□□□ -2.22
NUP188YML103C SAG1P20840 650 aa1.17□□□□□ -2.22
NUP188YML103C HXT2P23585 541 aa1.17□□□□□ -2.22
NUP188YML103C CPR3P25719 182 aa1.17□□□□□ -2.22
NUP188YML103C RPL16AP26784 199 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C KAR9P32526 644 aa1.17□□□□□ -2.22
NUP188YML103C CBF5P33322 483 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
NUP188YML103C MRPS5P33759 307 aa1.17□□□□□ -2.22
NUP188YML103C YBL059WP34224 193 aa1.17□□□□□ -2.22
NUP188YML103C SWC5P38326 303 aa1.17□□□□□ -2.22
NUP188YML103C MTC4P38335 694 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C ARK1P53974 638 aa1.17□□□□□ -2.22
NUP188YML103C CCE1Q03702 353 aa1.17□□□□□ -2.22
NUP188YML103C YMR087WQ04299 284 aa1.17□□□□□ -2.22
NUP188YML103C CUR1Q06469 252 aa1.17□□□□□ -2.22
NUP188YML103C ARR1Q06596 294 aa1.17□□□□□ -2.22
NUP188YML103C SAM4Q08985 325 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C RKM5Q12367 367 aa1.17□□□□□ -2.22
NUP188YML103C DBP3P20447 523 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C SKG6P32900 734 aaPredicted RBP1.17□□□□□ -2.22
NUP188YML103C COS9P36034 407 aa1.17□□□□□ -2.22
NUP188YML103C GCN20P43535 752 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C MST27P53176 234 aa1.17□□□□□ -2.22
NUP188YML103C RPN14P53196 417 aa1.17□□□□□ -2.22
NUP188YML103C CWC25P53854 179 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C YMR317WQ04893 1140 aa1.17□□□□□ -2.22
NUP188YML103C GMC2Q06201 188 aa1.17□□□□□ -2.22
NUP188YML103C ASA1Q06822 443 aa1.17□□□□□ -2.22
NUP188YML103C YPR1Q12458 312 aa1.17□□□□□ -2.22
NUP188YML103C VPS63O13549 108 aa1.17□□□□□ -2.22
NUP188YML103C NAM2P11325 894 aa1.17□□□□□ -2.22
NUP188YML103C MSI1P13712 422 aa1.17□□□□□ -2.22
NUP188YML103C EXG1P23776 448 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C MEI5P32489 222 aa1.17□□□□□ -2.22
NUP188YML103C CAB3P36076 571 aa1.17□□□□□ -2.22
NUP188YML103C BMT2P38278 337 aa1.17□□□□□ -2.22
NUP188YML103C YHR218WP38899 603 aa1.17□□□□□ -2.22
NUP188YML103C FMC1P40491 155 aa1.17□□□□□ -2.22
NUP188YML103C WWM1P43582 211 aaKnown RBP1.17□□□□□ -2.22
NUP188YML103C AIM24P47127 394 aa1.17□□□□□ -2.22
NUP188YML103C KAP114P53067 1004 aa1.17□□□□□ -2.22
NUP188YML103C MRM2P53123 320 aa1.17□□□□□ -2.22
NUP188YML103C RRN9P53437 365 aa1.17□□□□□ -2.22
NUP188YML103C CAB5Q03941 241 aa1.17□□□□□ -2.22
NUP188YML103C PBA1Q05778 276 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms