RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C CIK1Q01649 594 aa2.93□□□□□ -1.94
SDO1YLR022C NUP100Q02629 959 aa2.93□□□□□ -1.94
SDO1YLR022C YDR415CQ04033 374 aaPredicted RBP2.93□□□□□ -1.94
SDO1YLR022C NUS1Q12063 375 aa2.93□□□□□ -1.94
SDO1YLR022C ATG9Q12142 997 aa2.93□□□□□ -1.94
SDO1YLR022C NCE102Q12207 173 aaRIP-Chip data2.93□□□□□ -1.94not detected
SDO1YLR022C EFG1Q3E705 233 aaKnown RBP2.93□□□□□ -1.94
SDO1YLR022C YBR298C-AQ8TGK4 73 aa2.93□□□□□ -1.94
SDO1YLR022C YBR126W-AQ8TGU7 68 aa2.93□□□□□ -1.94
SDO1YLR022C SEY1Q99287 776 aa2.93□□□□□ -1.94
SDO1YLR022C Q0297Q9ZZV8 51 aa2.93□□□□□ -1.94
SDO1YLR022C CCW14O13547 238 aa2.92□□□□□ -1.94
SDO1YLR022C HXK2P04807 486 aaKnown RBP2.92□□□□□ -1.94
SDO1YLR022C PWP1P21304 576 aaKnown RBP2.92□□□□□ -1.94
SDO1YLR022C TRS65P32893 560 aa2.92□□□□□ -1.94
SDO1YLR022C SPC34P36131 295 aa2.92□□□□□ -1.94
SDO1YLR022C MNL1P38888 796 aa2.92□□□□□ -1.94
SDO1YLR022C FAD1P38913 306 aa2.92□□□□□ -1.94
SDO1YLR022C YIL060WP40519 144 aa2.92□□□□□ -1.94
SDO1YLR022C YIL054WP40524 105 aa2.92□□□□□ -1.94
SDO1YLR022C PKP2P53170 491 aa2.92□□□□□ -1.94
SDO1YLR022C OGG1P53397 376 aaPredicted RBP2.92□□□□□ -1.94
SDO1YLR022C ENT5Q03769 411 aaKnown RBP2.92□□□□□ -1.94
SDO1YLR022C YMR155WQ03795 547 aa2.92□□□□□ -1.94
SDO1YLR022C GPM3Q12326 303 aa2.92□□□□□ -1.94
SDO1YLR022C YRM1Q12340 786 aa2.92□□□□□ -1.94
SDO1YLR022C NOP58Q12499 511 aaKnown RBP2.92□□□□□ -1.94
SDO1YLR022C TEF1P02994 458 aaKnown RBP2.91□□□□□ -1.94
SDO1YLR022C ARG3P05150 338 aa2.91□□□□□ -1.94
SDO1YLR022C RPL19AP0CX82 189 aaKnown RBP2.91□□□□□ -1.94
SDO1YLR022C RPL19BP0CX83 189 aaPredicted RBP2.91□□□□□ -1.94
SDO1YLR022C AMD1P15274 810 aaKnown RBP2.91□□□□□ -1.94
SDO1YLR022C ERG8P24521 451 aa2.91□□□□□ -1.94
SDO1YLR022C PRP18P33411 251 aaPredicted RBP2.91□□□□□ -1.94
SDO1YLR022C YBR139WP38109 508 aa2.91□□□□□ -1.94
SDO1YLR022C PSD1P39006 500 aa2.91□□□□□ -1.94
SDO1YLR022C FLC2P39719 783 aa2.91□□□□□ -1.94
SDO1YLR022C YJL068CP40363 299 aa2.91□□□□□ -1.94
SDO1YLR022C ATM1P40416 690 aa2.91□□□□□ -1.94
SDO1YLR022C AZF1P41696 914 aa2.91□□□□□ -1.94
SDO1YLR022C DPB11P47027 764 aaPredicted RBP2.91□□□□□ -1.94
SDO1YLR022C STR3P53101 465 aaKnown RBP2.91□□□□□ -1.94
SDO1YLR022C DUO1P53168 247 aaKnown RBP2.91□□□□□ -1.94
SDO1YLR022C ALF1P53904 254 aa2.91□□□□□ -1.94
SDO1YLR022C TRM12Q04235 462 aa2.91□□□□□ -1.94
SDO1YLR022C ADE13Q05911 482 aaKnown RBP2.91□□□□□ -1.94
SDO1YLR022C ATG26Q06321 1198 aa2.91□□□□□ -1.94
SDO1YLR022C YOL075CQ08234 1294 aa2.91□□□□□ -1.94
SDO1YLR022C YOL159CQ08300 171 aa2.91□□□□□ -1.94
SDO1YLR022C NMD4Q12129 218 aa2.91□□□□□ -1.94
SDO1YLR022C YPL150WQ12152 901 aa2.91□□□□□ -1.94
SDO1YLR022C YOR019WQ99248 730 aa2.91□□□□□ -1.94
SDO1YLR022C CYR1P08678 2026 aaKnown RBP2.91□□□□□ -1.94
SDO1YLR022C MET17P06106 444 aa2.9□□□□□ -1.95
SDO1YLR022C RNR2P09938 399 aaKnown RBP2.9□□□□□ -1.95
SDO1YLR022C ROX1P25042 368 aa2.9□□□□□ -1.95
SDO1YLR022C MXR2P25566 168 aa2.9□□□□□ -1.95
SDO1YLR022C ERG3P32353 365 aa2.9□□□□□ -1.95
SDO1YLR022C MDL1P33310 695 aa2.9□□□□□ -1.95
SDO1YLR022C RPS27AP35997 82 aaKnown RBP2.9□□□□□ -1.95
SDO1YLR022C SNU114P36048 1008 aaKnown RBP2.9□□□□□ -1.95
SDO1YLR022C MAL33P38157 468 aa2.9□□□□□ -1.95
SDO1YLR022C RPS27BP38711 82 aa2.9□□□□□ -1.95
SDO1YLR022C FET3P38993 636 aa2.9□□□□□ -1.95
SDO1YLR022C UIP3P39547 235 aa2.9□□□□□ -1.95
SDO1YLR022C GDI1P39958 451 aaKnown RBP2.9□□□□□ -1.95
SDO1YLR022C DIM1P41819 318 aaKnown RBP2.9□□□□□ -1.95
SDO1YLR022C RRT5P43607 289 aa2.9□□□□□ -1.95
SDO1YLR022C ERG26P53199 349 aaKnown RBP2.9□□□□□ -1.95
SDO1YLR022C YGR127WP53275 312 aa2.9□□□□□ -1.95
SDO1YLR022C VPS75P53853 264 aa2.9□□□□□ -1.95
SDO1YLR022C IBD2P53892 351 aa2.9□□□□□ -1.95
SDO1YLR022C CDC14Q00684 551 aa2.9□□□□□ -1.95
SDO1YLR022C RNH1Q04740 348 aa2.9□□□□□ -1.95
SDO1YLR022C NOP6Q07623 225 aaKnown RBP2.9□□□□□ -1.95
SDO1YLR022C YOR114WQ12219 294 aa2.9□□□□□ -1.95
SDO1YLR022C INP53Q12271 1107 aa2.9□□□□□ -1.95
SDO1YLR022C RTN2Q12443 393 aa2.9□□□□□ -1.95
SDO1YLR022C CDC39P25655 2108 aaKnown RBP2.89□□□□□ -1.95
SDO1YLR022C STF1P01098 86 aa2.89□□□□□ -1.95
SDO1YLR022C RPB2P08518 1224 aaKnown RBP2.89□□□□□ -1.95
SDO1YLR022C MRS3P10566 314 aa2.89□□□□□ -1.95
SDO1YLR022C GLK1P17709 500 aaKnown RBP2.89□□□□□ -1.95
SDO1YLR022C CLB3P24870 427 aa2.89□□□□□ -1.95
SDO1YLR022C MRP20P32387 263 aa2.89□□□□□ -1.95
SDO1YLR022C ERG1P32476 496 aaKnown RBP2.89□□□□□ -1.95
SDO1YLR022C YOX1P34161 385 aa2.89□□□□□ -1.95
SDO1YLR022C SKT5P34226 696 aa2.89□□□□□ -1.95
SDO1YLR022C SWC5P38326 303 aa2.89□□□□□ -1.95
SDO1YLR022C YHR045WP38775 560 aa2.89□□□□□ -1.95
SDO1YLR022C IME4P41833 600 aa2.89□□□□□ -1.95
SDO1YLR022C GPI8P49018 411 aa2.89□□□□□ -1.95
SDO1YLR022C SEH1P53011 349 aaKnown RBP2.89□□□□□ -1.95
SDO1YLR022C DUG3P53871 357 aa2.89□□□□□ -1.95
SDO1YLR022C PRP3Q03338 469 aaPredicted RBP2.89□□□□□ -1.95
SDO1YLR022C VTA1Q06263 330 aa2.89□□□□□ -1.95
SDO1YLR022C APL4Q12028 832 aa2.89□□□□□ -1.95
SDO1YLR022C YDR018CQ12185 396 aa2.89□□□□□ -1.95
SDO1YLR022C GEP5Q12393 293 aa2.89□□□□□ -1.95
SDO1YLR022C BI3Q9ZZW7 517 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms