RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C UBA1P22515 1024 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C CTR86P25355 563 aa1.38□□□□□ -2.19
RPL40BYKR094C FAA1P30624 700 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C YEL043WP32618 956 aa1.38□□□□□ -2.19
RPL40BYKR094C YSC83P32792 385 aa1.38□□□□□ -2.19
RPL40BYKR094C SKN1P33336 771 aa1.38□□□□□ -2.19
RPL40BYKR094C QDR3P38227 689 aa1.38□□□□□ -2.19
RPL40BYKR094C SIF2P38262 535 aa1.38□□□□□ -2.19
RPL40BYKR094C STP2P38704 541 aa1.38□□□□□ -2.19
RPL40BYKR094C MLH1P38920 769 aa1.38□□□□□ -2.19
RPL40BYKR094C YAL037WP39728 267 aa1.38□□□□□ -2.19
RPL40BYKR094C YIL029CP40538 142 aa1.38□□□□□ -2.19
RPL40BYKR094C RRP46P53256 223 aaPredicted RBP1.38□□□□□ -2.19
RPL40BYKR094C RTT102P53330 157 aa1.38□□□□□ -2.19
RPL40BYKR094C TRM112P53738 135 aaPredicted RBP1.38□□□□□ -2.19
RPL40BYKR094C YMR010WQ03687 405 aa1.38□□□□□ -2.19
RPL40BYKR094C RRB1Q04225 511 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C YMR310CQ04867 317 aaPredicted RBP1.38□□□□□ -2.19
RPL40BYKR094C BCH1Q05029 724 aa1.38□□□□□ -2.19
RPL40BYKR094C DBP9Q06218 594 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C RRP9Q06506 573 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C NDL1Q06568 189 aa1.38□□□□□ -2.19
RPL40BYKR094C IPK1Q06667 281 aa1.38□□□□□ -2.19
RPL40BYKR094C PEX27Q08580 376 aa1.38□□□□□ -2.19
RPL40BYKR094C APC2Q12440 853 aa1.38□□□□□ -2.19
RPL40BYKR094C RMD5Q12508 421 aa1.38□□□□□ -2.19
RPL40BYKR094C HTZ1Q12692 134 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C TPK3P05986 398 aa1.37□□□□□ -2.19
RPL40BYKR094C ILV5P06168 395 aaKnown RBP1.37□□□□□ -2.19
RPL40BYKR094C IMA3P0CW40 589 aa1.37□□□□□ -2.19
RPL40BYKR094C IMA4P0CW41 589 aa1.37□□□□□ -2.19
RPL40BYKR094C MAS1P10507 462 aa1.37□□□□□ -2.19
RPL40BYKR094C SCH9P11792 824 aaKnown RBP1.37□□□□□ -2.19
RPL40BYKR094C GEX1P25596 615 aa1.37□□□□□ -2.19
RPL40BYKR094C POT1P27796 417 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
RPL40BYKR094C ZUO1P32527 433 aaKnown RBP1.37□□□□□ -2.19
RPL40BYKR094C SKT5P34226 696 aa1.37□□□□□ -2.19
RPL40BYKR094C PTK1P36002 662 aaPredicted RBP1.37□□□□□ -2.19
RPL40BYKR094C ADH5P38113 351 aaKnown RBP1.37□□□□□ -2.19
RPL40BYKR094C SPP381P38282 291 aaPredicted RBP1.37□□□□□ -2.19
RPL40BYKR094C SBE22P38814 852 aa1.37□□□□□ -2.19
RPL40BYKR094C GPI16P38875 610 aa1.37□□□□□ -2.19
RPL40BYKR094C YPS6P40583 537 aa1.37□□□□□ -2.19
RPL40BYKR094C ATG18P43601 500 aa1.37□□□□□ -2.19
RPL40BYKR094C YHC3P47040 408 aa1.37□□□□□ -2.19
RPL40BYKR094C PDR16P53860 351 aaKnown RBP1.37□□□□□ -2.19
RPL40BYKR094C YNL146WP53906 100 aa1.37□□□□□ -2.19
RPL40BYKR094C YNL143CP53908 130 aa1.37□□□□□ -2.19
RPL40BYKR094C KTR6P54070 446 aa1.37□□□□□ -2.19
RPL40BYKR094C SPR6Q01684 191 aa1.37□□□□□ -2.19
RPL40BYKR094C URH1Q04179 340 aa1.37□□□□□ -2.19
RPL40BYKR094C ARR1Q06596 294 aa1.37□□□□□ -2.19
RPL40BYKR094C LDS2Q08218 356 aa1.37□□□□□ -2.19
RPL40BYKR094C IMA2Q08295 589 aa1.37□□□□□ -2.19
RPL40BYKR094C RTC5Q12108 567 aaKnown RBP1.37□□□□□ -2.19
RPL40BYKR094C TPT1Q12272 230 aaKnown RBP1.37□□□□□ -2.19
RPL40BYKR094C NCA2Q12374 616 aa1.37□□□□□ -2.19
RPL40BYKR094C COX3P00420 269 aa1.36□□□□□ -2.19
RPL40BYKR094C OPI3P05375 206 aa1.36□□□□□ -2.19
RPL40BYKR094C STE3P06783 470 aa1.36□□□□□ -2.19
RPL40BYKR094C YLL053CP0CD98 152 aa1.36□□□□□ -2.19
RPL40BYKR094C THR4P16120 514 aaKnown RBP1.36□□□□□ -2.19
RPL40BYKR094C DAP2P18962 818 aa1.36□□□□□ -2.19
RPL40BYKR094C RPB5P20434 215 aa1.36□□□□□ -2.19
RPL40BYKR094C MRPL8P22353 238 aa1.36□□□□□ -2.19
RPL40BYKR094C YCL068CP25593 260 aa1.36□□□□□ -2.19
RPL40BYKR094C RDS1P25611 832 aa1.36□□□□□ -2.19
RPL40BYKR094C HMX1P32339 317 aa1.36□□□□□ -2.19
RPL40BYKR094C COX14P39103 70 aa1.36□□□□□ -2.19
RPL40BYKR094C MAM33P40513 266 aa1.36□□□□□ -2.19
RPL40BYKR094C TOS3P43637 560 aa1.36□□□□□ -2.19
RPL40BYKR094C SFH5P47008 294 aa1.36□□□□□ -2.19
RPL40BYKR094C YNR068CP53754 272 aa1.36□□□□□ -2.19
RPL40BYKR094C PRP3Q03338 469 aaPredicted RBP1.36□□□□□ -2.19
RPL40BYKR094C CCE1Q03702 353 aa1.36□□□□□ -2.19
RPL40BYKR094C URC2Q04411 772 aa1.36□□□□□ -2.19
RPL40BYKR094C MGR3Q04472 501 aa1.36□□□□□ -2.19
RPL40BYKR094C ECM7Q06200 448 aa1.36□□□□□ -2.19
RPL40BYKR094C ASA1Q06822 443 aa1.36□□□□□ -2.19
RPL40BYKR094C PML1Q07930 204 aaPredicted RBP1.36□□□□□ -2.19
RPL40BYKR094C SRL2Q12020 392 aa1.36□□□□□ -2.19
RPL40BYKR094C REX3Q12090 404 aa1.36□□□□□ -2.19
RPL40BYKR094C MDY2Q12285 212 aa1.36□□□□□ -2.19
RPL40BYKR094C PSY3Q12318 242 aa1.36□□□□□ -2.19
RPL40BYKR094C FOL3Q12676 427 aaPredicted RBP1.36□□□□□ -2.19
RPL40BYKR094C POM152P39685 1337 aa1.36□□□□□ -2.19
RPL40BYKR094C RPL12AP0CX53 165 aaKnown RBP1.35□□□□□ -2.19
RPL40BYKR094C RPL12BP0CX54 165 aa1.35□□□□□ -2.19
RPL40BYKR094C GRR1P24814 1151 aa1.35□□□□□ -2.19
RPL40BYKR094C PSO2P30620 661 aa1.35□□□□□ -2.19
RPL40BYKR094C MSK1P32048 576 aa1.35□□□□□ -2.19
RPL40BYKR094C NIP1P32497 812 aaKnown RBP1.35□□□□□ -2.19
RPL40BYKR094C SRB2P34162 210 aa1.35□□□□□ -2.19
RPL40BYKR094C PES4P39684 611 aa1.35□□□□□ -2.19
RPL40BYKR094C PTI1P39927 425 aaPredicted RBP1.35□□□□□ -2.19
RPL40BYKR094C OSW5P40219 148 aa1.35□□□□□ -2.19
RPL40BYKR094C YGL114WP53134 725 aa1.35□□□□□ -2.19
RPL40BYKR094C YGR117CP53270 476 aa1.35□□□□□ -2.19
RPL40BYKR094C ARP5P53946 755 aa1.35□□□□□ -2.19
RPL40BYKR094C YLR297WQ05899 129 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms