RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C FSH3Q99369 266 aa1.35□□□□□ -2.19
VPS55YJR044C SSK22P25390 1331 aaPredicted RBP1.35□□□□□ -2.19
VPS55YJR044C COX3P00420 269 aa1.34□□□□□ -2.19
VPS55YJR044C SUP35P05453 685 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C SSA3P09435 649 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C IMA3P0CW40 589 aa1.34□□□□□ -2.19
VPS55YJR044C IMA4P0CW41 589 aa1.34□□□□□ -2.19
VPS55YJR044C RPL12AP0CX53 165 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C RPL12BP0CX54 165 aa1.34□□□□□ -2.19
VPS55YJR044C UNG1P12887 359 aa1.34□□□□□ -2.19
VPS55YJR044C AMD1P15274 810 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C SAM2P19358 384 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C PRR1P28708 518 aa1.34□□□□□ -2.19
VPS55YJR044C ITR2P30606 609 aa1.34□□□□□ -2.19
VPS55YJR044C YPS1P32329 569 aa1.34□□□□□ -2.19
VPS55YJR044C EFB1P32471 206 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C RAD23P32628 398 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C SKG6P32900 734 aaPredicted RBP1.34□□□□□ -2.19
VPS55YJR044C SKT5P34226 696 aa1.34□□□□□ -2.19
VPS55YJR044C MYO3P36006 1272 aa1.34□□□□□ -2.19
VPS55YJR044C PMU1P36069 295 aa1.34□□□□□ -2.19
VPS55YJR044C RFC3P38629 340 aa1.34□□□□□ -2.19
VPS55YJR044C BFR1P38934 470 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
VPS55YJR044C YAL037WP39728 267 aa1.34□□□□□ -2.19
VPS55YJR044C UTP25P40498 721 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C SEC27P41811 889 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C YFL067WP43537 175 aa1.34□□□□□ -2.19
VPS55YJR044C TOS3P43637 560 aa1.34□□□□□ -2.19
VPS55YJR044C MRX5P47007 382 aa1.34□□□□□ -2.19
VPS55YJR044C LOH1P47055 219 aa1.34□□□□□ -2.19
VPS55YJR044C CGR1P53188 120 aa1.34□□□□□ -2.19
VPS55YJR044C POP6P53218 158 aa1.34□□□□□ -2.19
VPS55YJR044C KTR5P53966 522 aaPredicted RBP1.34□□□□□ -2.19
VPS55YJR044C SPO19Q03029 223 aa1.34□□□□□ -2.19
VPS55YJR044C TLG1Q03322 224 aa1.34□□□□□ -2.19
VPS55YJR044C RVB1Q03940 463 aaKnown RBP1.34□□□□□ -2.19
VPS55YJR044C URC2Q04411 772 aa1.34□□□□□ -2.19
VPS55YJR044C AIM33Q04516 312 aa1.34□□□□□ -2.19
VPS55YJR044C APC4Q04601 652 aa1.34□□□□□ -2.19
VPS55YJR044C ECM18Q04623 453 aa1.34□□□□□ -2.19
VPS55YJR044C MSC3Q05812 728 aa1.34□□□□□ -2.19
VPS55YJR044C RRG8Q06109 277 aa1.34□□□□□ -2.19
VPS55YJR044C BCP1Q06338 283 aa1.34□□□□□ -2.19
VPS55YJR044C MHR1Q06630 226 aa1.34□□□□□ -2.19
VPS55YJR044C VAC14Q06708 880 aa1.34□□□□□ -2.19
VPS55YJR044C RRT8Q08219 342 aa1.34□□□□□ -2.19
VPS55YJR044C IMA2Q08295 589 aa1.34□□□□□ -2.19
VPS55YJR044C DNL4Q08387 944 aaPredicted RBP1.34□□□□□ -2.19
VPS55YJR044C TIM18Q08749 192 aa1.34□□□□□ -2.19
VPS55YJR044C YOR387CQ08910 206 aa1.34□□□□□ -2.19
VPS55YJR044C YPQ1Q12010 308 aa1.34□□□□□ -2.19
VPS55YJR044C YPR022CQ12139 1133 aa1.34□□□□□ -2.19
VPS55YJR044C YDL009CQ12210 107 aa1.34□□□□□ -2.19
VPS55YJR044C RKM5Q12367 367 aa1.34□□□□□ -2.19
VPS55YJR044C NCA2Q12374 616 aa1.34□□□□□ -2.19
VPS55YJR044C YOP1Q12402 180 aa1.34□□□□□ -2.19
VPS55YJR044C SUC2P00724 532 aa1.33□□□□□ -2.2
VPS55YJR044C RPL18AP0CX49 186 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C RPL18BP0CX50 186 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C MRP1P10662 321 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C RSR1P13856 272 aa1.33□□□□□ -2.2
VPS55YJR044C SEC63P14906 663 aa1.33□□□□□ -2.2
VPS55YJR044C ARF2P19146 181 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C SLY1P22213 666 aa1.33□□□□□ -2.2
VPS55YJR044C RBK1P25332 333 aa1.33□□□□□ -2.2
VPS55YJR044C NAM9P27929 486 aa1.33□□□□□ -2.2
VPS55YJR044C DEG1P31115 442 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C SRB4P32569 687 aa1.33□□□□□ -2.2
VPS55YJR044C BUD2P33314 1104 aa1.33□□□□□ -2.2
VPS55YJR044C ECT1P33412 323 aa1.33□□□□□ -2.2
VPS55YJR044C YKL071WP36086 256 aa1.33□□□□□ -2.2
VPS55YJR044C YKL070WP36087 169 aa1.33□□□□□ -2.2
VPS55YJR044C ECM8P38246 354 aa1.33□□□□□ -2.2
VPS55YJR044C YBP1P38315 674 aa1.33□□□□□ -2.2
VPS55YJR044C GEP4P38812 185 aa1.33□□□□□ -2.2
VPS55YJR044C YHR177WP38867 453 aa1.33□□□□□ -2.2
VPS55YJR044C RBG1P39729 369 aa1.33□□□□□ -2.2
VPS55YJR044C SHO1P40073 367 aa1.33□□□□□ -2.2
VPS55YJR044C DSE1P40077 573 aa1.33□□□□□ -2.2
VPS55YJR044C DFG10P40526 253 aa1.33□□□□□ -2.2
VPS55YJR044C YPS6P40583 537 aa1.33□□□□□ -2.2
VPS55YJR044C BNA6P43619 295 aa1.33□□□□□ -2.2
VPS55YJR044C GWT1P47026 490 aa1.33□□□□□ -2.2
VPS55YJR044C YJR030CP47101 745 aa1.33□□□□□ -2.2
VPS55YJR044C STE24P47154 453 aa1.33□□□□□ -2.2
VPS55YJR044C RIB4P50861 169 aaPredicted RBP1.33□□□□□ -2.2
VPS55YJR044C DRN1P53255 507 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C YGR117CP53270 476 aa1.33□□□□□ -2.2
VPS55YJR044C CWC22P53333 577 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C DBP6P53734 629 aaKnown RBP1.33□□□□□ -2.2
VPS55YJR044C YNL260CP53846 198 aa1.33□□□□□ -2.2
VPS55YJR044C TIM11P81449 96 aaPredicted RBP1.33□□□□□ -2.2
VPS55YJR044C ODC1Q03028 310 aa1.33□□□□□ -2.2
VPS55YJR044C HER2Q03557 464 aa1.33□□□□□ -2.2
VPS55YJR044C CCE1Q03702 353 aa1.33□□□□□ -2.2
VPS55YJR044C INP2Q03824 705 aa1.33□□□□□ -2.2
VPS55YJR044C URH1Q04179 340 aa1.33□□□□□ -2.2
VPS55YJR044C ERV41Q04651 352 aa1.33□□□□□ -2.2
VPS55YJR044C GPN3Q06543 272 aa1.33□□□□□ -2.2
VPS55YJR044C SKI7Q08491 747 aaPredicted RBP1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms