RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C PBN1P25580 416 aa0.76□□□□□ -2.29
SEC1YDR164C YCR099CP25657 155 aa0.76□□□□□ -2.29
SEC1YDR164C POT1P27796 417 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
SEC1YDR164C GAC1P28006 793 aa0.76□□□□□ -2.29
SEC1YDR164C YIM1P28625 365 aa0.76□□□□□ -2.29
SEC1YDR164C URA10P30402 227 aa0.76□□□□□ -2.29
SEC1YDR164C TPS2P31688 896 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C GCG1P32656 232 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C YSC83P32792 385 aa0.76□□□□□ -2.29
SEC1YDR164C YME1P32795 747 aa0.76□□□□□ -2.29
SEC1YDR164C COT1P32798 439 aa0.76□□□□□ -2.29
SEC1YDR164C PTM1P32857 523 aa0.76□□□□□ -2.29
SEC1YDR164C TUL1P36096 758 aa0.76□□□□□ -2.29
SEC1YDR164C RPL32P38061 130 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C ADH5P38113 351 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C SIF2P38262 535 aa0.76□□□□□ -2.29
SEC1YDR164C RFC3P38629 340 aa0.76□□□□□ -2.29
SEC1YDR164C MED6P38782 295 aa0.76□□□□□ -2.29
SEC1YDR164C ANS1P38832 159 aa0.76□□□□□ -2.29
SEC1YDR164C RCY1P39531 840 aa0.76□□□□□ -2.29
SEC1YDR164C GDI1P39958 451 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C YEL028WP39989 153 aa0.76□□□□□ -2.29
SEC1YDR164C SER3P40054 469 aa0.76□□□□□ -2.29
SEC1YDR164C SCC4P40090 624 aa0.76□□□□□ -2.29
SEC1YDR164C PAN6P40459 309 aa0.76□□□□□ -2.29
SEC1YDR164C FIS1P40515 155 aa0.76□□□□□ -2.29
SEC1YDR164C YRB2P40517 327 aa0.76□□□□□ -2.29
SEC1YDR164C CHS6P40955 746 aa0.76□□□□□ -2.29
SEC1YDR164C RRT5P43607 289 aa0.76□□□□□ -2.29
SEC1YDR164C YJL055WP47044 245 aa0.76□□□□□ -2.29
SEC1YDR164C MDE1P47095 244 aa0.76□□□□□ -2.29
SEC1YDR164C KEL2P50090 882 aa0.76□□□□□ -2.29
SEC1YDR164C ATP22P50273 684 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C NUP84P52891 726 aa0.76□□□□□ -2.29
SEC1YDR164C TAF6P53040 516 aa0.76□□□□□ -2.29
SEC1YDR164C RMR1P53060 241 aa0.76□□□□□ -2.29
SEC1YDR164C EMC4P53073 190 aa0.76□□□□□ -2.29
SEC1YDR164C MNP1P53163 194 aaPredicted RBP0.76□□□□□ -2.29
SEC1YDR164C GPI1P53306 609 aa0.76□□□□□ -2.29
SEC1YDR164C SOL4P53315 255 aa0.76□□□□□ -2.29
SEC1YDR164C YNL134CP53912 376 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C KTR6P54070 446 aa0.76□□□□□ -2.29
SEC1YDR164C SLG1P54867 378 aa0.76□□□□□ -2.29
SEC1YDR164C GRX5Q02784 150 aa0.76□□□□□ -2.29
SEC1YDR164C YPL107WQ02873 248 aa0.76□□□□□ -2.29
SEC1YDR164C PNG1Q02890 363 aa0.76□□□□□ -2.29
SEC1YDR164C KAP120Q02932 1032 aa0.76□□□□□ -2.29
SEC1YDR164C ARO80Q04052 950 aa0.76□□□□□ -2.29
SEC1YDR164C MGR3Q04472 501 aa0.76□□□□□ -2.29
SEC1YDR164C SPC24Q04477 213 aa0.76□□□□□ -2.29
SEC1YDR164C FUS2Q05670 677 aa0.76□□□□□ -2.29
SEC1YDR164C SPH1Q06160 661 aa0.76□□□□□ -2.29
SEC1YDR164C LOT6Q07923 191 aa0.76□□□□□ -2.29
SEC1YDR164C VPS54Q12071 889 aa0.76□□□□□ -2.29
SEC1YDR164C NCE102Q12207 173 aaRIP-Chip data0.76□□□□□ -2.29not detected
SEC1YDR164C RPN5Q12250 445 aaKnown RBP0.76□□□□□ -2.29
SEC1YDR164C YLR126CQ12288 251 aa0.76□□□□□ -2.29
SEC1YDR164C HRT3Q12347 344 aa0.76□□□□□ -2.29
SEC1YDR164C FRE6Q12473 712 aa0.76□□□□□ -2.29
SEC1YDR164C SNF8Q12483 233 aa0.76□□□□□ -2.29
SEC1YDR164C CTF3Q12748 733 aa0.76□□□□□ -2.29
SEC1YDR164C YLR278CQ05854 1341 aa0.76□□□□□ -2.29
SEC1YDR164C STE2D6VTK4 431 aa0.75□□□□□ -2.29
SEC1YDR164C HIS1P00498 297 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C COR1P07256 457 aa0.75□□□□□ -2.29
SEC1YDR164C PEP4P07267 405 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C RPL31BP0C2H9 113 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C RAP1P11938 827 aa0.75□□□□□ -2.29
SEC1YDR164C YAK1P14680 807 aa0.75□□□□□ -2.29
SEC1YDR164C HSP26P15992 214 aaKnown RBP RIP-Chip data0.75□□□□□ -2.29not detected
SEC1YDR164C HEM15P16622 393 aa0.75□□□□□ -2.29
SEC1YDR164C PRP2P20095 876 aaPredicted RBP0.75□□□□□ -2.29
SEC1YDR164C SGV1P23293 657 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C BUD5P25300 642 aaPredicted RBP0.75□□□□□ -2.29
SEC1YDR164C RSA4P25382 515 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C BOS1P25385 244 aa0.75□□□□□ -2.29
SEC1YDR164C DCC1P25559 380 aa0.75□□□□□ -2.29
SEC1YDR164C SPB1P25582 841 aaPredicted RBP0.75□□□□□ -2.29
SEC1YDR164C GEX1P25596 615 aa0.75□□□□□ -2.29
SEC1YDR164C RPS5P26783 225 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C SIN4P32259 974 aa0.75□□□□□ -2.29
SEC1YDR164C ZUO1P32527 433 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C SPR1P32603 445 aa0.75□□□□□ -2.29
SEC1YDR164C SKG6P32900 734 aaPredicted RBP0.75□□□□□ -2.29
SEC1YDR164C RIB7P33312 244 aa0.75□□□□□ -2.29
SEC1YDR164C MTR2P34232 184 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C COY1P34237 679 aa0.75□□□□□ -2.29
SEC1YDR164C YKL100CP34248 587 aa0.75□□□□□ -2.29
SEC1YDR164C DBP7P36120 742 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C PIM1P36775 1133 aa0.75□□□□□ -2.29
SEC1YDR164C KAP104P38217 918 aaKnown RBP0.75□□□□□ -2.29
SEC1YDR164C MMS4P38257 691 aa0.75□□□□□ -2.29
SEC1YDR164C YSW1P38280 609 aa0.75□□□□□ -2.29
SEC1YDR164C ICS2P38284 255 aa0.75□□□□□ -2.29
SEC1YDR164C MSR1P38714 643 aa0.75□□□□□ -2.29
SEC1YDR164C YHR054CP38780 354 aa0.75□□□□□ -2.29
SEC1YDR164C TVP23P38962 199 aa0.75□□□□□ -2.29
SEC1YDR164C POP2P39008 433 aa0.75□□□□□ -2.29
SEC1YDR164C FRT2P39734 528 aa0.75□□□□□ -2.29
SEC1YDR164C MAM33P40513 266 aa0.75□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms