RNA–Protein interactions for RNA: YDL087C

LUC7, Transcript of Essential protein associated with the U1 snRNP complex, yeast

Gene LUC7, Length 786 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LUC7	YDL087C	MLH1	P38920	769 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	EDC3	P39998	551 aa	Known RBP	4.84	□□□□□ -1.63
LUC7	YDL087C	SLM1	P40485	686 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	PTR3	P43606	678 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	YJR141W	P47172	347 aa	Predicted RBP	4.84	□□□□□ -1.63
LUC7	YDL087C	RRP46	P53256	223 aa	Predicted RBP	4.84	□□□□□ -1.63
LUC7	YDL087C	SOL4	P53315	255 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	CPR8	P53728	308 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	AQR1	P53943	586 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	DID2	P69771	204 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	TOF2	Q02208	771 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	GPI17	Q04080	534 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	YML053C	Q04978	212 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	YFH1	Q07540	174 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	SGT1	Q08446	395 aa		4.84	□□□□□ -1.63
LUC7	YDL087C	SPS4	P09937	338 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	RPL31B	P0C2H9	113 aa	Known RBP	4.83	□□□□□ -1.64
LUC7	YDL087C	ATR1	P13090	542 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	SRV2	P17555	526 aa	Known RBP	4.83	□□□□□ -1.64
LUC7	YDL087C	URE2	P23202	354 aa	Known RBP	4.83	□□□□□ -1.64
LUC7	YDL087C	PTP1	P25044	335 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	BOS1	P25385	244 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	YIM1	P28625	365 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	FAA1	P30624	700 aa	Known RBP	4.83	□□□□□ -1.64
LUC7	YDL087C	ICS2	P38284	255 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	IMD2	P38697	523 aa	Known RBP	4.83	□□□□□ -1.64
LUC7	YDL087C	YJL107C	P42947	387 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	AIP1	P46680	615 aa	Known RBP	4.83	□□□□□ -1.64
LUC7	YDL087C	EMC2	P47133	292 aa	Known RBP	4.83	□□□□□ -1.64
LUC7	YDL087C	BIR1	P47134	954 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	ECM27	P47144	725 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	RPN14	P53196	417 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	HER2	Q03557	464 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	TRS23	Q03784	219 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	YMR160W	Q03823	816 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	TAF9	Q05027	157 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	PDR8	Q06149	701 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	YLL007C	Q07799	665 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	FEX2	Q08991	375 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	ATG31	Q12421	196 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	YCL001W-B	Q96VH2	84 aa		4.83	□□□□□ -1.64
LUC7	YDL087C	CBP2	P03874	630 aa	Predicted RBP	4.82	□□□□□ -1.64
LUC7	YDL087C	ARG81	P05085	880 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	YAK1	P14680	807 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	ARO3	P14843	370 aa	Known RBP	4.82	□□□□□ -1.64
LUC7	YDL087C	NAM9	P27929	486 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	SEC1	P30619	724 aa	Known RBP	4.82	□□□□□ -1.64
LUC7	YDL087C	NDI1	P32340	513 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	ASF2	P32448	525 aa	Predicted RBP	4.82	□□□□□ -1.64
LUC7	YDL087C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
LUC7	YDL087C	THO1	P40040	218 aa	Known RBP	4.82	□□□□□ -1.64
LUC7	YDL087C	HPM1	P40481	377 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	SHQ1	P40486	507 aa	Predicted RBP	4.82	□□□□□ -1.64
LUC7	YDL087C	YFR020W	P43600	232 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	EFM3	P47163	339 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	YNL143C	P53908	130 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	YMR010W	Q03687	405 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	PLM2	Q04383	521 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	TEN1	Q07921	160 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	RAX1	Q08760	435 aa		4.82	□□□□□ -1.64
LUC7	YDL087C	CBP6	P07253	162 aa	Predicted RBP	4.81	□□□□□ -1.64
LUC7	YDL087C	MATALPHA2	P0CY08	210 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	HMLALPHA2	P0CY09	210 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	HXT2	P23585	541 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	ELO2	P25358	347 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	RAD14	P28519	371 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	MCM4	P30665	933 aa	Known RBP	4.81	□□□□□ -1.64
LUC7	YDL087C	GCG1	P32656	232 aa	Known RBP	4.81	□□□□□ -1.64
LUC7	YDL087C	TAF14	P35189	244 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	ARA1	P38115	344 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	ECM31	P38122	312 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	TSC10	P38342	320 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	VAB2	P40003	282 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	YMR134W	P40207	237 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	VHS2	P40463	436 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	XBP1	P40489	647 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	BPL1	P48445	690 aa	Predicted RBP	4.81	□□□□□ -1.64
LUC7	YDL087C	PRP24	P49960	444 aa	Known RBP	4.81	□□□□□ -1.64
LUC7	YDL087C	NAS6	P50086	228 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	OKP1	P53298	406 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	SNX41	Q04053	625 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	MSC3	Q05812	728 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	MUM3	Q08750	479 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	DCN1	Q12395	269 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	PFK27	Q12471	397 aa	Predicted RBP	4.81	□□□□□ -1.64
LUC7	YDL087C	MTR10	Q99189	972 aa		4.81	□□□□□ -1.64
LUC7	YDL087C	RPL25	P04456	142 aa	Known RBP	4.8	□□□□□ -1.64
LUC7	YDL087C	RPS19A	P07280	144 aa	Known RBP	4.8	□□□□□ -1.64
LUC7	YDL087C	RPS19B	P07281	144 aa	Predicted RBP	4.8	□□□□□ -1.64
LUC7	YDL087C	WHI2	P12611	486 aa		4.8	□□□□□ -1.64
LUC7	YDL087C	PUT4	P15380	627 aa		4.8	□□□□□ -1.64
LUC7	YDL087C	RNR3	P21672	869 aa	Known RBP	4.8	□□□□□ -1.64
LUC7	YDL087C	SGV1	P23293	657 aa	Known RBP	4.8	□□□□□ -1.64
LUC7	YDL087C	CPR3	P25719	182 aa		4.8	□□□□□ -1.64
LUC7	YDL087C	VMA6	P32366	345 aa	Known RBP	4.8	□□□□□ -1.64
LUC7	YDL087C	CLG1	P35190	452 aa		4.8	□□□□□ -1.64
LUC7	YDL087C	RPC25	P35718	212 aa		4.8	□□□□□ -1.64
LUC7	YDL087C	HOT13	P36078	116 aa		4.8	□□□□□ -1.64
LUC7	YDL087C	UTP30	P36144	274 aa	Known RBP	4.8	□□□□□ -1.64
LUC7	YDL087C	ZTA1	P38230	334 aa	Known RBP	4.8	□□□□□ -1.64

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