RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W PRE3P38624 215 aa2.1□□□□□ -2.07
NUP170YBL079W RFC2P40348 353 aa2.1□□□□□ -2.07
NUP170YBL079W TED1P40533 473 aa2.1□□□□□ -2.07
NUP170YBL079W IRC5P43610 853 aa2.1□□□□□ -2.07
NUP170YBL079W OGG1P53397 376 aaPredicted RBP2.1□□□□□ -2.07
NUP170YBL079W MTQ1P53944 314 aa2.1□□□□□ -2.07
NUP170YBL079W YNL010WP53981 241 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W SEC13Q04491 297 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W DFG5Q05031 458 aa2.1□□□□□ -2.07
NUP170YBL079W NDL1Q06568 189 aa2.1□□□□□ -2.07
NUP170YBL079W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
NUP170YBL079W YPR096CO13587 100 aa2.1□□□□□ -2.07
NUP170YBL079W RHO2P06781 192 aa2.1□□□□□ -2.07
NUP170YBL079W HMG1P12683 1054 aa2.1□□□□□ -2.07
NUP170YBL079W PDA1P16387 420 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W KGD1P20967 1014 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W CAT2P32796 670 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W LTV1P34078 463 aa2.1□□□□□ -2.07
NUP170YBL079W PTC1P35182 281 aa2.1□□□□□ -2.07
NUP170YBL079W FRE2P36033 711 aa2.1□□□□□ -2.07
NUP170YBL079W JEN1P36035 616 aa2.1□□□□□ -2.07
NUP170YBL079W VBA2P38358 474 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W RTC3P38804 111 aaPredicted RBP2.1□□□□□ -2.07
NUP170YBL079W NSG1P38837 291 aa2.1□□□□□ -2.07
NUP170YBL079W BOL3P39724 118 aa2.1□□□□□ -2.07
NUP170YBL079W YER121WP40076 114 aa2.1□□□□□ -2.07
NUP170YBL079W STR2P47164 639 aa2.1□□□□□ -2.07
NUP170YBL079W YDL186WP48568 277 aa2.1□□□□□ -2.07
NUP170YBL079W TAD1P53065 400 aa2.1□□□□□ -2.07
NUP170YBL079W SOK2P53438 785 aaPredicted RBP2.1□□□□□ -2.07
NUP170YBL079W DSL1P53847 754 aa2.1□□□□□ -2.07
NUP170YBL079W RSM23Q01163 450 aa2.1□□□□□ -2.07
NUP170YBL079W YPL107WQ02873 248 aa2.1□□□□□ -2.07
NUP170YBL079W CTK1Q03957 528 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W MIX14Q04341 121 aa2.1□□□□□ -2.07
NUP170YBL079W YDR514CQ04408 483 aa2.1□□□□□ -2.07
NUP170YBL079W PRS5Q12265 496 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W YGR035W-AQ45U48 73 aa2.1□□□□□ -2.07
NUP170YBL079W CDC34P14682 295 aa2.1□□□□□ -2.07
NUP170YBL079W ELO2P25358 347 aa2.1□□□□□ -2.07
NUP170YBL079W MRPS5P33759 307 aa2.1□□□□□ -2.07
NUP170YBL079W VPS41P38959 992 aa2.1□□□□□ -2.07
NUP170YBL079W RPL10P41805 221 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W YJR115WP47152 169 aa2.1□□□□□ -2.07
NUP170YBL079W CUS2P53830 285 aaPredicted RBP2.1□□□□□ -2.07
NUP170YBL079W ASI1P54074 624 aa2.1□□□□□ -2.07
NUP170YBL079W RHO4Q00246 291 aa2.1□□□□□ -2.07
NUP170YBL079W SSL2Q00578 843 aa2.1□□□□□ -2.07
NUP170YBL079W ARR2Q06597 130 aa2.1□□□□□ -2.07
NUP170YBL079W YLR049CQ12110 428 aa2.1□□□□□ -2.07
NUP170YBL079W YER145C-AA0A023PYF4 145 aa2.1□□□□□ -2.07
NUP170YBL079W TDH2P00358 332 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W TDH3P00359 332 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07 RIP-Chip
NUP170YBL079W YGL041W-AP0C5N3 154 aa2.1□□□□□ -2.07
NUP170YBL079W CDC10P25342 322 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W OCA4P25366 362 aa2.1□□□□□ -2.07
NUP170YBL079W RPB9P27999 122 aa2.1□□□□□ -2.07
NUP170YBL079W ARN1P38731 627 aa2.1□□□□□ -2.07
NUP170YBL079W BIG1P38813 335 aa2.1□□□□□ -2.07
NUP170YBL079W QRI1P43123 477 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W PGU1P47180 361 aa2.1□□□□□ -2.07
NUP170YBL079W BIO3P50277 480 aa2.1□□□□□ -2.07
NUP170YBL079W RMI1Q02685 241 aa2.1□□□□□ -2.07
NUP170YBL079W NCE101Q02820 53 aa2.1□□□□□ -2.07
NUP170YBL079W GOT1Q03554 138 aa2.1□□□□□ -2.07
NUP170YBL079W RAD30Q04049 632 aa2.1□□□□□ -2.07
NUP170YBL079W SWF1Q04629 336 aa2.1□□□□□ -2.07
NUP170YBL079W ADE13Q05911 482 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W MFG1Q07684 458 aa2.1□□□□□ -2.07
NUP170YBL079W LYS21Q12122 440 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W DET1Q99288 334 aaKnown RBP2.1□□□□□ -2.07
NUP170YBL079W DAL3P32459 195 aa2.09□□□□□ -2.07
NUP170YBL079W UTR2P32623 467 aa2.09□□□□□ -2.07
NUP170YBL079W RPS27AP35997 82 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W ETR1P38071 380 aa2.09□□□□□ -2.07
NUP170YBL079W RPS27BP38711 82 aa2.09□□□□□ -2.07
NUP170YBL079W GRE3P38715 327 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
NUP170YBL079W RIX1P38883 763 aaPredicted RBP2.09□□□□□ -2.07
NUP170YBL079W TOK1P40310 691 aa2.09□□□□□ -2.07
NUP170YBL079W SNM1P40993 198 aa2.09□□□□□ -2.07
NUP170YBL079W YGR201CP42936 225 aa2.09□□□□□ -2.07
NUP170YBL079W YJL055WP47044 245 aa2.09□□□□□ -2.07
NUP170YBL079W COS10P52924 374 aa2.09□□□□□ -2.07
NUP170YBL079W MNT4P53745 580 aa2.09□□□□□ -2.07
NUP170YBL079W UBP2Q01476 1272 aa2.09□□□□□ -2.07
NUP170YBL079W URH1Q04179 340 aa2.09□□□□□ -2.07
NUP170YBL079W RAF1Q06891 181 aa2.09□□□□□ -2.07
NUP170YBL079W WTM1Q12363 437 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W THP2O13539 261 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W CAR1P00812 333 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W ERG20P08524 352 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W ERG11P10614 530 aa2.09□□□□□ -2.07
NUP170YBL079W SEC12P11655 471 aa2.09□□□□□ -2.07
NUP170YBL079W ART10P18634 518 aaKnown RBP2.09□□□□□ -2.07
NUP170YBL079W SLY41P22215 453 aa2.09□□□□□ -2.07
NUP170YBL079W ZIP1P31111 875 aa2.09□□□□□ -2.07
NUP170YBL079W SWH1P35845 1188 aa2.09□□□□□ -2.07
NUP170YBL079W ROT2P38138 954 aa2.09□□□□□ -2.07
NUP170YBL079W UFD1P53044 361 aa2.09□□□□□ -2.07
NUP170YBL079W SMM1P53720 384 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms