RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA3	YBL075C	VBA3	P25594	458 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	VBA5	P36172	582 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	BAP3	P41815	604 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	CHA4	P43634	648 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	YMR130W	Q04223	302 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	FMP25	Q08023	583 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	13.62	□□□□□ -0.23	not detected
SSA3	YBL075C	MRPL44	P19956	98 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	FUN26	P31381	517 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	DOA4	P32571	926 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	COX13	P32799	129 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	YHR033W	P38690	423 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	MUP3	P38734	546 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	YFL052W	P43551	465 aa		13.62	□□□□□ -0.23
SSA3	YBL075C	JHD2	P47156	728 aa	Predicted RBP	13.62	□□□□□ -0.23
SSA3	YBL075C	YPL108W	Q02872	168 aa	Predicted RBP	13.62	□□□□□ -0.23
SSA3	YBL075C	PEP4	P07267	405 aa	Known RBP	13.61	□□□□□ -0.23
SSA3	YBL075C	SAM35	P14693	329 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	GSH1	P32477	678 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	DMA1	P38823	416 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	NVJ1	P38881	321 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	GDI1	P39958	451 aa	Known RBP	13.61	□□□□□ -0.23
SSA3	YBL075C	PTC2	P39966	464 aa	Known RBP	13.61	□□□□□ -0.23
SSA3	YBL075C	MAF1	P41910	395 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	YGR201C	P42936	225 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	CAK1	P43568	368 aa	Predicted RBP	13.61	□□□□□ -0.23
SSA3	YBL075C	MRX5	P47007	382 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	KAP120	Q02932	1032 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	CIA1	Q05583	330 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	AFI1	Q99222	893 aa		13.61	□□□□□ -0.23
SSA3	YBL075C	RPS4A	P0CX35	261 aa	Known RBP	13.6	□□□□□ -0.23
SSA3	YBL075C	RPS4B	P0CX36	261 aa	Known RBP	13.6	□□□□□ -0.23
SSA3	YBL075C	CAT2	P32796	670 aa	Known RBP	13.6	□□□□□ -0.23
SSA3	YBL075C	WBP1	P33767	430 aa	Known RBP	13.6	□□□□□ -0.23
SSA3	YBL075C	FLO10	P36170	1169 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	AVT5	P38176	459 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	PRE6	P40303	254 aa	Known RBP	13.6	□□□□□ -0.23
SSA3	YBL075C	COS12	P53053	380 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	SIW14	P53965	281 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	PAL1	Q05518	499 aa	Known RBP	13.6	□□□□□ -0.23
SSA3	YBL075C	TPO3	Q06451	622 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	MFG1	Q07684	458 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	SIA1	Q12212	622 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	VMA9	Q3E7B6	73 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	GLK1	P17709	500 aa	Known RBP	13.6	□□□□□ -0.23
SSA3	YBL075C	GAC1	P28006	793 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	ORC2	P32833	620 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	SOH1	P38633	127 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	OCA5	P38738	679 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	AIM18	P38884	321 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	TOK1	P40310	691 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	GCV1	P48015	400 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	GPI8	P49018	411 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	ROG1	P53118	685 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	TPP1	Q03796	238 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	MCA1	Q08601	432 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	UBX3	Q12229	455 aa		13.6	□□□□□ -0.23
SSA3	YBL075C	ARG80	P07249	177 aa		13.59	□□□□□ -0.23
SSA3	YBL075C	TRX2	P22803	104 aa	Known RBP	13.59	□□□□□ -0.23
SSA3	YBL075C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	13.59	□□□□□ -0.23	not detected
SSA3	YBL075C	NOP16	P40007	231 aa	Known RBP	13.59	□□□□□ -0.23
SSA3	YBL075C	JHD1	P40034	492 aa		13.59	□□□□□ -0.23
SSA3	YBL075C	YGR127W	P53275	312 aa		13.59	□□□□□ -0.23
SSA3	YBL075C	IDP3	P53982	420 aa	Known RBP	13.59	□□□□□ -0.23
SSA3	YBL075C	MZM1	Q03429	123 aa	Predicted RBP	13.59	□□□□□ -0.23
SSA3	YBL075C	SPC3	Q12133	184 aa		13.59	□□□□□ -0.23
SSA3	YBL075C	NBP2	Q12163	236 aa		13.59	□□□□□ -0.23
SSA3	YBL075C	YPK1	P12688	680 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	YIM1	P28625	365 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	HOM6	P31116	359 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	SSS1	P35179	80 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	YKL162C	P36052	402 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	POP7	P38291	140 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	YIR016W	P40572	265 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	RPL10	P41805	221 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	SRP1	Q02821	542 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	SWF1	Q04629	336 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	SFM1	Q12314	213 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	AHC1	Q12433	566 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	HRP1	Q99383	534 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	YPR117W	Q06116	2489 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	LRE1	P25579	583 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	SCO2	P38072	301 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	LSM5	P40089	93 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	BUR6	P40096	142 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	RRT5	P43607	289 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	COX16	P47081	118 aa		13.58	□□□□□ -0.24
SSA3	YBL075C	LYS20	P48570	428 aa	Known RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	BUD20	Q08004	166 aa	Predicted RBP	13.58	□□□□□ -0.24
SSA3	YBL075C	SLH1	P53327	1967 aa	Known RBP	13.57	□□□□□ -0.24
SSA3	YBL075C	PRP2	P20095	876 aa	Predicted RBP	13.57	□□□□□ -0.24
SSA3	YBL075C	ECT1	P33412	323 aa		13.57	□□□□□ -0.24
SSA3	YBL075C	POA1	P38218	177 aa		13.57	□□□□□ -0.24
SSA3	YBL075C	FMP10	P40098	244 aa		13.57	□□□□□ -0.24
SSA3	YBL075C	MPM1	P40364	252 aa		13.57	□□□□□ -0.24
SSA3	YBL075C	Q0142	Q9ZZW4	58 aa		13.57	□□□□□ -0.24
SSA3	YBL075C	REV1	P12689	985 aa		13.56	□□□□□ -0.24
SSA3	YBL075C	RNA14	P25298	677 aa	Known RBP	13.56	□□□□□ -0.24
SSA3	YBL075C	DCC1	P25559	380 aa		13.56	□□□□□ -0.24
SSA3	YBL075C	PEX32	P38292	413 aa		13.56	□□□□□ -0.24

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms