RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP60	YAR002W	RBL2	P48606	106 aa	Known RBP	3.22	□□□□□ -1.89
NUP60	YAR002W	BIO3	P50277	480 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	YGR054W	P53235	642 aa	Known RBP	3.22	□□□□□ -1.89
NUP60	YAR002W	AQR1	P53943	586 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	COG5	P53951	403 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	YPL071C	Q02864	156 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	APC4	Q04601	652 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	SWF1	Q04629	336 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	RRP45	Q05636	305 aa	Known RBP	3.22	□□□□□ -1.89
NUP60	YAR002W	ATG38	Q05789	226 aa	Known RBP	3.22	□□□□□ -1.89
NUP60	YAR002W	RRT8	Q08219	342 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	VPS68	Q12016	184 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	SUL2	Q12325	893 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	IES3	Q12345	250 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	YPL119C-A	Q3E751	87 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	MPD2	Q99316	277 aa		3.22	□□□□□ -1.89
NUP60	YAR002W	INH1	P01097	85 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	REP1	P03871	373 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	MET17	P06106	444 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	RPS14A	P06367	137 aa	Known RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	ALG7	P07286	448 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	ITR2	P30606	609 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	KKQ8	P36004	724 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	YHR112C	P38716	378 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	YLF2	P38746	405 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	IPT1	P38954	527 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	PCF11	P39081	626 aa	Predicted RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	RPS14B	P39516	138 aa	Known RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	SOP4	P39543	234 aa	Predicted RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	SPO73	P40031	143 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	COG3	P40094	801 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	AZF1	P41696	914 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	DUG1	P43616	481 aa	Known RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	SDT1	P53078	280 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	SGF73	P53165	657 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	PRM8	P53174	237 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	RTS3	P53289	263 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	PXR1	P53335	271 aa	Predicted RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	TEX1	P53851	422 aa	Known RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	TDA7	P53882	636 aa	Predicted RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	OAZ1	Q02803	292 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	CTK1	Q03957	528 aa	Known RBP	3.21	□□□□□ -1.9
NUP60	YAR002W	SPO77	Q06134	477 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	FMP45	Q07651	309 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	YLR036C	Q07986	203 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	PLB3	Q08108	686 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	YLR126C	Q12288	251 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	GLE1	Q12315	538 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	TRM10	Q12400	293 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	TMA17	Q12513	150 aa		3.21	□□□□□ -1.9
NUP60	YAR002W	RPS17A	P02407	136 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	RPS17B	P14127	136 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	POL30	P15873	258 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	MER1	P16523	270 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	RPS1B	P23248	255 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	RER1	P25560	188 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	YCL049C	P25577	312 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	MSB2	P32334	1306 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	PET127	P32606	800 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	SSO1	P32867	290 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	GDH2	P33327	1092 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	YKL097C	P34245	136 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	TPO5	P36029	618 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	YPK3	P38070	525 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	RRN10	P38204	145 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	MUM2	P38236	366 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	FES1	P38260	290 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	YHR177W	P38867	453 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	BAP3	P41815	604 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	SSU1	P41930	458 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	PSA1	P41940	361 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	CAK1	P43568	368 aa	Predicted RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	SNF12	P53628	566 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	YNL181W	P53878	407 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	YPL107W	Q02873	248 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	ARP10	Q04549	284 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	YDL114W	Q07530	308 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	TEN1	Q07921	160 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	RPN8	Q08723	338 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	YOR389W	Q08912	624 aa		3.2	□□□□□ -1.9
NUP60	YAR002W	HRP1	Q99383	534 aa	Known RBP	3.2	□□□□□ -1.9
NUP60	YAR002W	MF(ALPHA)1	P01149	165 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	PUT2	P07275	575 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	SPT15	P13393	240 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	BET2	P20133	325 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	RAD51	P25454	400 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YIM1	P28625	365 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	GSH1	P32477	678 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MEI5	P32489	222 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	LHP1	P33399	275 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	SEC66	P33754	206 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	LOT5	P34234	306 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	MNN2	P38069	597 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	SCO2	P38072	301 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	YBR139W	P38109	508 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	TRM7	P38238	310 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	YHR033W	P38690	423 aa		3.19	□□□□□ -1.9
NUP60	YAR002W	DED81	P38707	554 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	ISC1	P40015	477 aa	Known RBP	3.19	□□□□□ -1.9
NUP60	YAR002W	TPA1	P40032	644 aa	Known RBP	3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms