RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 ECT1P33412 323 aa1.88□□□□□ -2.11
snR54snR54 PFF1P38244 976 aa1.88□□□□□ -2.11
snR54snR54 GPI16P38875 610 aa1.88□□□□□ -2.11
snR54snR54 MMF1P40185 145 aaKnown RBP1.88□□□□□ -2.11
snR54snR54 TOM22P49334 152 aa1.88□□□□□ -2.11
snR54snR54 TOS2P50078 622 aa1.88□□□□□ -2.11
snR54snR54 RPN9Q04062 393 aaKnown RBP1.88□□□□□ -2.11
snR54snR54 YHC1Q05900 231 aaKnown RBP1.88□□□□□ -2.11
snR54snR54 CDC31P06704 161 aaKnown RBP1.87□□□□□ -2.11
snR54snR54 URA7P28274 579 aaKnown RBP1.87□□□□□ -2.11
snR54snR54 FUN26P31381 517 aa1.87□□□□□ -2.11
snR54snR54 DEP1P31385 405 aa1.87□□□□□ -2.11
snR54snR54 RPN12P32496 274 aa1.87□□□□□ -2.11
snR54snR54 FMT1P32785 401 aa1.87□□□□□ -2.11
snR54snR54 BYE1P36106 594 aa1.87□□□□□ -2.11
snR54snR54 ECM8P38246 354 aa1.87□□□□□ -2.11
snR54snR54 VHS2P40463 436 aa1.87□□□□□ -2.11
snR54snR54 CAK1P43568 368 aaPredicted RBP1.87□□□□□ -2.11
snR54snR54 YGR117CP53270 476 aa1.87□□□□□ -2.11
snR54snR54 RPT4P53549 437 aaKnown RBP1.87□□□□□ -2.11
snR54snR54 SPR6Q01684 191 aa1.87□□□□□ -2.11
snR54snR54 YPL107WQ02873 248 aa1.87□□□□□ -2.11
snR54snR54 ENT5Q03769 411 aaKnown RBP1.87□□□□□ -2.11
snR54snR54 YDL114WQ07530 308 aa1.87□□□□□ -2.11
snR54snR54 VPS54Q12071 889 aa1.87□□□□□ -2.11
snR54snR54 RRG1Q12167 365 aaPredicted RBP1.87□□□□□ -2.11
snR54snR54 TIR4Q12218 487 aaPredicted RBP1.87□□□□□ -2.11
snR54snR54 SFI1Q12369 946 aa1.87□□□□□ -2.11
snR54snR54 YDL199CQ12407 687 aa1.87□□□□□ -2.11
snR54snR54 INH1P01097 85 aa1.86□□□□□ -2.11
snR54snR54 PAB1P04147 577 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
snR54snR54 CDC21P06785 304 aa1.86□□□□□ -2.11
snR54snR54 GPX2P38143 162 aa1.86□□□□□ -2.11
snR54snR54 CHL4P38907 458 aa1.86□□□□□ -2.11
snR54snR54 STN1P38960 494 aa1.86□□□□□ -2.11
snR54snR54 HEM14P40012 539 aa1.86□□□□□ -2.11
snR54snR54 RPL21AQ02753 160 aaKnown RBP1.86□□□□□ -2.11
snR54snR54 PRP42Q03776 544 aaKnown RBP1.86□□□□□ -2.11
snR54snR54 ERB1Q04660 807 aaKnown RBP1.86□□□□□ -2.11
snR54snR54 SLF1Q12034 447 aaKnown RBP1.86□□□□□ -2.11
snR54snR54 MED2Q12124 431 aa1.86□□□□□ -2.11
snR54snR54 MCT1Q12283 360 aa1.86□□□□□ -2.11
snR54snR54 YDR061WQ12298 539 aa1.86□□□□□ -2.11
snR54snR54 SCM3Q12334 223 aa1.86□□□□□ -2.11
snR54snR54 RPL21BQ12672 160 aaKnown RBP1.86□□□□□ -2.11
snR54snR54 HTZ1Q12692 134 aaKnown RBP1.86□□□□□ -2.11
snR54snR54 MAS2P11914 482 aa1.85□□□□□ -2.11
snR54snR54 FUR1P18562 216 aaKnown RBP1.85□□□□□ -2.11
snR54snR54 ADK2P26364 225 aa1.85□□□□□ -2.11
snR54snR54 RAD5P32849 1169 aaPredicted RBP1.85□□□□□ -2.11
snR54snR54 ZTA1P38230 334 aaKnown RBP1.85□□□□□ -2.11
snR54snR54 INM1P38710 295 aa1.85□□□□□ -2.11
snR54snR54 WSC4P38739 605 aa1.85□□□□□ -2.11
snR54snR54 WSS1P38838 269 aa1.85□□□□□ -2.11
snR54snR54 MDM1Q01846 1127 aa1.85□□□□□ -2.11
snR54snR54 YOR376WQ08900 122 aa1.85□□□□□ -2.11
snR54snR54 OPI3P05375 206 aa1.84□□□□□ -2.11
snR54snR54 TPS2P31688 896 aaKnown RBP1.84□□□□□ -2.11
snR54snR54 PDC2P32896 925 aa1.84□□□□□ -2.11
snR54snR54 PRY2P36110 329 aa1.84□□□□□ -2.11
snR54snR54 FHL1P39521 936 aa1.84□□□□□ -2.11
snR54snR54 NOC2P39744 710 aaKnown RBP1.84□□□□□ -2.11
snR54snR54 YLR345WQ06137 509 aa1.84□□□□□ -2.11
snR54snR54 TPI1P00942 248 aaKnown RBP1.83□□□□□ -2.12
snR54snR54 CLB1P24868 471 aa1.83□□□□□ -2.12
snR54snR54 RIM1P32445 135 aaKnown RBP1.83□□□□□ -2.12
snR54snR54 SPO23P33757 523 aa1.83□□□□□ -2.12
snR54snR54 SKT5P34226 696 aa1.83□□□□□ -2.12
snR54snR54 MCR1P36060 302 aaKnown RBP1.83□□□□□ -2.12
snR54snR54 OLA1P38219 394 aaKnown RBP1.83□□□□□ -2.12
snR54snR54 FAD1P38913 306 aa1.83□□□□□ -2.12
snR54snR54 KEG1P43614 200 aa1.83□□□□□ -2.12
snR54snR54 STE24P47154 453 aa1.83□□□□□ -2.12
snR54snR54 TCB2P48231 1178 aa1.83□□□□□ -2.12
snR54snR54 SEH1P53011 349 aaKnown RBP1.83□□□□□ -2.12
snR54snR54 PIB2P53191 635 aa1.83□□□□□ -2.12
snR54snR54 VHT1P53241 593 aa1.83□□□□□ -2.12
snR54snR54 RRN9P53437 365 aa1.83□□□□□ -2.12
snR54snR54 TRM112P53738 135 aaPredicted RBP1.83□□□□□ -2.12
snR54snR54 YDR131CQ03899 556 aa1.83□□□□□ -2.12
snR54snR54 RNH203Q12338 110 aa1.83□□□□□ -2.12
snR54snR54 STE7P06784 515 aa1.82□□□□□ -2.12
snR54snR54 RPS19AP07280 144 aaKnown RBP1.82□□□□□ -2.12
snR54snR54 RPS19BP07281 144 aaPredicted RBP1.82□□□□□ -2.12
snR54snR54 GIT1P25346 518 aa1.82□□□□□ -2.12
snR54snR54 CHA1P25379 360 aaKnown RBP1.82□□□□□ -2.12
snR54snR54 SOL2P37262 315 aa1.82□□□□□ -2.12
snR54snR54 ABM1P47146 123 aa1.82□□□□□ -2.12
snR54snR54 PMT5P52867 743 aa1.82□□□□□ -2.12
snR54snR54 REX2P54964 269 aaKnown RBP1.82□□□□□ -2.12
snR54snR54 YDR115WQ04598 105 aa1.82□□□□□ -2.12
snR54snR54 YPR195CQ06594 109 aa1.82□□□□□ -2.12
snR54snR54 RUP1Q12242 671 aa1.82□□□□□ -2.12
snR54snR54 YOP1Q12402 180 aa1.82□□□□□ -2.12
snR54snR54 PCL9Q12477 304 aa1.82□□□□□ -2.12
snR54snR54 TPK3P05986 398 aa1.81□□□□□ -2.12
snR54snR54 HSP104P31539 908 aaKnown RBP1.81□□□□□ -2.12
snR54snR54 TIR2P33890 251 aa1.81□□□□□ -2.12
snR54snR54 GEP4P38812 185 aa1.81□□□□□ -2.12
snR54snR54 PEX22P39718 180 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 158.1 ms