RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	ATG12	P38316	186 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	VHC1	P38329	1120 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	ATF1	P40353	525 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	POP1	P41812	875 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	YNL181W	P53878	407 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	YMR130W	Q04223	302 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	RTN1	Q04947	295 aa	Known RBP	4.88	□□□□□ -1.63
UBA3	YPR066W	RSF1	Q05043	376 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	MDM30	Q05930	598 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
UBA3	YPR066W	DCI1	Q08558	271 aa		4.88	□□□□□ -1.63
UBA3	YPR066W	SRV2	P17555	526 aa	Known RBP	4.87	□□□□□ -1.63
UBA3	YPR066W	SPO7	P18410	259 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	RAD57	P25301	460 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	RFC3	P38629	340 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	GND1	P38720	489 aa	Known RBP	4.87	□□□□□ -1.63
UBA3	YPR066W	YMR124W	P39523	943 aa	Known RBP	4.87	□□□□□ -1.63
UBA3	YPR066W	YIL054W	P40524	105 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	IAH1	P41734	238 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	UFE1	P41834	346 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	RPS0B	P46654	252 aa	Known RBP	4.87	□□□□□ -1.63
UBA3	YPR066W	YJL132W	P47014	750 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	TDA7	P53882	636 aa	Predicted RBP	4.87	□□□□□ -1.63
UBA3	YPR066W	BET4	Q00618	327 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	YDR286C	Q05530	114 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	PHO92	Q06390	306 aa		4.87	□□□□□ -1.63
UBA3	YPR066W	RKM1	Q08961	583 aa	Predicted RBP	4.87	□□□□□ -1.63
UBA3	YPR066W	ACC1	Q00955	2233 aa	Known RBP	4.87	□□□□□ -1.63
UBA3	YPR066W	MSF1	P08425	469 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	ARO3	P14843	370 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	GLK1	P17709	500 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	MET16	P18408	261 aa	Predicted RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	ARF2	P19146	181 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	TRX1	P22217	103 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	YCP4	P25349	247 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	BEM1	P29366	551 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	SEC1	P30619	724 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	SIN4	P32259	974 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	HXT1	P32465	570 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	PRP21	P32524	280 aa	Predicted RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	URA8	P38627	578 aa	Predicted RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	CCT2	P39076	527 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	EDC3	P39998	551 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	PCL6	P40038	420 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	RRT5	P43607	289 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	BNA3	P47039	444 aa	Known RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	TOM22	P49334	152 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	HOP2	P53187	214 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	SAM50	P53969	484 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	SMA1	Q02651	245 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	GLO2	Q05584	274 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	DCS1	Q06151	350 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	THI20	Q08224	551 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	SMF3	Q12078	473 aa	Predicted RBP	4.86	□□□□□ -1.63
UBA3	YPR066W	PER33	Q12144	273 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	RKM5	Q12367	367 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	FRE6	Q12473	712 aa		4.86	□□□□□ -1.63
UBA3	YPR066W	YCR007C	P25354	239 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	MGR1	P25573	417 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	SWC5	P38326	303 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	BRO1	P48582	844 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	PIR1	Q03178	341 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	YMR087W	Q04299	284 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	PGC1	Q08959	321 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	NFI1	Q12216	726 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	HSP42	Q12329	375 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	OCA6	Q12454	224 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	TAD3	Q9URQ3	322 aa		4.85	□□□□□ -1.63
UBA3	YPR066W	ACH1	P32316	526 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	VHS2	P40463	436 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	MKT1	P40850	830 aa	Known RBP	4.84	□□□□□ -1.63
UBA3	YPR066W	SAS2	P40963	338 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	RTT101	P47050	842 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	GPI1	P53306	609 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	OCA2	P53949	197 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	YPL107W	Q02873	248 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	MSS11	Q03825	758 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	IVY1	Q04934	453 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	YLR456W	Q06199	204 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	AEP3	Q12089	606 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	YLR046C	Q12253	270 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	SKS1	Q12505	502 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	IZH4	Q99393	312 aa		4.84	□□□□□ -1.63
UBA3	YPR066W	YFL068W	P0CX99	160 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	YLL066W-A	P0CY00	160 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	YLL067W-A	P0CY01	160 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	RHB1	P25378	209 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	KAR9	P32526	644 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	ECM15	P35195	104 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	UTH1	P36135	365 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	ZTA1	P38230	334 aa	Known RBP	4.83	□□□□□ -1.64
UBA3	YPR066W	OSW5	P40219	148 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	SEC9	P40357	651 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	ATM1	P40416	690 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	MDV1	P47025	714 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	ASN2	P49090	572 aa	Known RBP	4.83	□□□□□ -1.64
UBA3	YPR066W	EMC4	P53073	190 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	FLC3	P53121	802 aa		4.83	□□□□□ -1.64
UBA3	YPR066W	RHO5	P53879	331 aa	Known RBP	4.83	□□□□□ -1.64
UBA3	YPR066W	IMP4	P53941	290 aa	Known RBP	4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms