RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C ORM1P53224 222 aa2.46□□□□□ -2.02
DNL4YOR005C SMD2Q06217 110 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C ARR1Q06596 294 aa2.46□□□□□ -2.02
DNL4YOR005C SMC5Q08204 1093 aa2.46□□□□□ -2.02
DNL4YOR005C MRPL23Q12487 163 aaPredicted RBP2.46□□□□□ -2.02
DNL4YOR005C FLO11P08640 1367 aa2.46□□□□□ -2.02
DNL4YOR005C RPL24AP04449 155 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C RAD52P06778 471 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C SNF3P10870 884 aa2.46□□□□□ -2.02
DNL4YOR005C GAL3P13045 520 aa2.46□□□□□ -2.02
DNL4YOR005C HEM15P16622 393 aa2.46□□□□□ -2.02
DNL4YOR005C YCR006CP25350 157 aa2.46□□□□□ -2.02
DNL4YOR005C SOR1P35497 357 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C YKL023WP36103 277 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C OMA1P36163 345 aa2.46□□□□□ -2.02
DNL4YOR005C RRN10P38204 145 aa2.46□□□□□ -2.02
DNL4YOR005C POP4P38336 279 aa2.46□□□□□ -2.02
DNL4YOR005C FRT2P39734 528 aa2.46□□□□□ -2.02
DNL4YOR005C UBP5P39944 805 aa2.46□□□□□ -2.02
DNL4YOR005C SYG1P40528 902 aa2.46□□□□□ -2.02
DNL4YOR005C YPS6P40583 537 aa2.46□□□□□ -2.02
DNL4YOR005C GCD14P46959 383 aaPredicted RBP2.46□□□□□ -2.02
DNL4YOR005C LIA1P47120 325 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C IMD3P50095 523 aaKnown RBP2.46□□□□□ -2.02
DNL4YOR005C YMR027WQ04371 470 aa2.46□□□□□ -2.02
DNL4YOR005C FUS2Q05670 677 aa2.46□□□□□ -2.02
DNL4YOR005C SOR2Q07786 357 aa2.46□□□□□ -2.02
DNL4YOR005C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
DNL4YOR005C YOR012WQ12351 137 aa2.46□□□□□ -2.02
DNL4YOR005C SUC2P00724 532 aa2.45□□□□□ -2.02
DNL4YOR005C YAK1P14680 807 aa2.45□□□□□ -2.02
DNL4YOR005C UTP11P34247 250 aaPredicted RBP2.45□□□□□ -2.02
DNL4YOR005C PTK1P36002 662 aaPredicted RBP2.45□□□□□ -2.02
DNL4YOR005C QDR3P38227 689 aa2.45□□□□□ -2.02
DNL4YOR005C SPL2P38839 148 aa2.45□□□□□ -2.02
DNL4YOR005C LSG1P53145 640 aaKnown RBP2.45□□□□□ -2.02
DNL4YOR005C PNC1P53184 216 aaKnown RBP2.45□□□□□ -2.02
DNL4YOR005C LSB1P53281 241 aa2.45□□□□□ -2.02
DNL4YOR005C GIS1Q03833 894 aa2.45□□□□□ -2.02
DNL4YOR005C SNX3Q08826 162 aaKnown RBP2.45□□□□□ -2.02
DNL4YOR005C NOT5Q12514 560 aaPredicted RBP2.45□□□□□ -2.02
DNL4YOR005C YPR089WO13585 888 aa2.45□□□□□ -2.02
DNL4YOR005C NFT1P0CE68 1218 aa2.45□□□□□ -2.02
DNL4YOR005C SEC62P21825 274 aa2.45□□□□□ -2.02
DNL4YOR005C NRP1P32770 719 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
DNL4YOR005C YSC83P32792 385 aa2.45□□□□□ -2.02
DNL4YOR005C OCT1P35999 772 aa2.45□□□□□ -2.02
DNL4YOR005C BZZ1P38822 633 aa2.45□□□□□ -2.02
DNL4YOR005C YFH7P43591 353 aa2.45□□□□□ -2.02
DNL4YOR005C PHO86P46956 311 aa2.45□□□□□ -2.02
DNL4YOR005C YJR154WP47181 346 aa2.45□□□□□ -2.02
DNL4YOR005C USE1P53146 245 aa2.45□□□□□ -2.02
DNL4YOR005C BUD32P53323 261 aa2.45□□□□□ -2.02
DNL4YOR005C STD1Q02794 444 aa2.45□□□□□ -2.02
DNL4YOR005C MUK1Q02866 612 aa2.45□□□□□ -2.02
DNL4YOR005C BCP1Q06338 283 aa2.45□□□□□ -2.02
DNL4YOR005C LDB17Q12342 491 aa2.45□□□□□ -2.02
DNL4YOR005C MYO1P08964 1928 aa2.45□□□□□ -2.02
DNL4YOR005C TDH1P00360 332 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C AQY1P0CD91 305 aa2.44□□□□□ -2.02
DNL4YOR005C ATR1P13090 542 aa2.44□□□□□ -2.02
DNL4YOR005C BUD23P25627 275 aaPredicted RBP2.44□□□□□ -2.02
DNL4YOR005C FUN19P28003 413 aaPredicted RBP2.44□□□□□ -2.02
DNL4YOR005C RPC34P32910 317 aa2.44□□□□□ -2.02
DNL4YOR005C CUE2P36075 443 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C YKL070WP36087 169 aa2.44□□□□□ -2.02
DNL4YOR005C YBL028CP38202 106 aa2.44□□□□□ -2.02
DNL4YOR005C KAP104P38217 918 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C YMR134WP40207 237 aa2.44□□□□□ -2.02
DNL4YOR005C YIL060WP40519 144 aa2.44□□□□□ -2.02
DNL4YOR005C NBP1P52919 319 aaPredicted RBP2.44□□□□□ -2.02
DNL4YOR005C YNL247WP53852 767 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C DUG3P53871 357 aa2.44□□□□□ -2.02
DNL4YOR005C OSH6Q02201 448 aa2.44□□□□□ -2.02
DNL4YOR005C SEG1Q04279 960 aa2.44□□□□□ -2.02
DNL4YOR005C HSP31Q04432 237 aa2.44□□□□□ -2.02
DNL4YOR005C PDR8Q06149 701 aa2.44□□□□□ -2.02
DNL4YOR005C MCP2Q06567 569 aa2.44□□□□□ -2.02
DNL4YOR005C RDR1Q08904 546 aa2.44□□□□□ -2.02
DNL4YOR005C PKH2Q12236 1081 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C CBF1P17106 351 aa2.44□□□□□ -2.02
DNL4YOR005C UGA1P17649 471 aa2.44□□□□□ -2.02
DNL4YOR005C PRO3P32263 286 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C TFC1P32367 649 aa2.44□□□□□ -2.02
DNL4YOR005C ECM25P32525 599 aa2.44□□□□□ -2.02
DNL4YOR005C RRP4P38792 359 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C YHR122WP38829 231 aa2.44□□□□□ -2.02
DNL4YOR005C PEX18P38855 283 aa2.44□□□□□ -2.02
DNL4YOR005C GAA1P39012 614 aa2.44□□□□□ -2.02
DNL4YOR005C PCF11P39081 626 aaPredicted RBP2.44□□□□□ -2.02
DNL4YOR005C PAC11P40960 533 aa2.44□□□□□ -2.02
DNL4YOR005C ORC5P50874 479 aa2.44□□□□□ -2.02
DNL4YOR005C SMM1P53720 384 aaKnown RBP2.44□□□□□ -2.02
DNL4YOR005C APM1Q00776 475 aaPredicted RBP2.44□□□□□ -2.02
DNL4YOR005C FMP42Q04991 504 aa2.44□□□□□ -2.02
DNL4YOR005C SNT309Q06091 175 aaPredicted RBP2.44□□□□□ -2.02
DNL4YOR005C YDL114WQ07530 308 aa2.44□□□□□ -2.02
DNL4YOR005C MCH4Q08268 501 aa2.44□□□□□ -2.02
DNL4YOR005C HEM1P09950 548 aaPredicted RBP2.43□□□□□ -2.02
DNL4YOR005C HNM1P19807 563 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms