RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C MET16P18408 261 aaPredicted RBP2.84□□□□□ -1.95
ATG3YNR007C TRX1P22217 103 aaKnown RBP2.84□□□□□ -1.95
ATG3YNR007C MSP1P28737 362 aa2.84□□□□□ -1.95
ATG3YNR007C YME1P32795 747 aa2.84□□□□□ -1.95
ATG3YNR007C GYP6P32806 458 aa2.84□□□□□ -1.95
ATG3YNR007C RAD5P32849 1169 aaPredicted RBP2.84□□□□□ -1.95
ATG3YNR007C CMC1P36064 111 aa2.84□□□□□ -1.95
ATG3YNR007C MRPL10P36520 322 aa2.84□□□□□ -1.95
ATG3YNR007C URA8P38627 578 aaPredicted RBP2.84□□□□□ -1.95
ATG3YNR007C SRP72P38688 640 aaKnown RBP2.84□□□□□ -1.95
ATG3YNR007C MDM31P38880 579 aa2.84□□□□□ -1.95
ATG3YNR007C AIM18P38884 321 aa2.84□□□□□ -1.95
ATG3YNR007C RPH1P39956 796 aa2.84□□□□□ -1.95
ATG3YNR007C YEL075CP39972 122 aa2.84□□□□□ -1.95
ATG3YNR007C YJL068CP40363 299 aa2.84□□□□□ -1.95
ATG3YNR007C SNG1P46950 547 aa2.84□□□□□ -1.95
ATG3YNR007C PET130P47065 347 aa2.84□□□□□ -1.95
ATG3YNR007C YJR154WP47181 346 aa2.84□□□□□ -1.95
ATG3YNR007C YGL108CP53139 140 aa2.84□□□□□ -1.95
ATG3YNR007C PKP2P53170 491 aa2.84□□□□□ -1.95
ATG3YNR007C RHO4Q00246 291 aa2.84□□□□□ -1.95
ATG3YNR007C CDC14Q00684 551 aa2.84□□□□□ -1.95
ATG3YNR007C NUP100Q02629 959 aa2.84□□□□□ -1.95
ATG3YNR007C SHR3Q02774 210 aa2.84□□□□□ -1.95
ATG3YNR007C RRN11Q04712 507 aa2.84□□□□□ -1.95
ATG3YNR007C RQC1Q05468 723 aaKnown RBP2.84□□□□□ -1.95
ATG3YNR007C YOL075CQ08234 1294 aa2.84□□□□□ -1.95
ATG3YNR007C SAM4Q08985 325 aaKnown RBP2.84□□□□□ -1.95
ATG3YNR007C DAS2Q12084 232 aa2.84□□□□□ -1.95
ATG3YNR007C YLR046CQ12253 270 aa2.84□□□□□ -1.95
ATG3YNR007C PEX11Q12462 236 aa2.84□□□□□ -1.95
ATG3YNR007C HSH49Q99181 213 aaPredicted RBP2.84□□□□□ -1.95
ATG3YNR007C CLC1P17891 233 aa2.83□□□□□ -1.96
ATG3YNR007C FUR1P18562 216 aaKnown RBP2.83□□□□□ -1.96
ATG3YNR007C PHO13P19881 312 aa2.83□□□□□ -1.96
ATG3YNR007C TYR1P20049 452 aa2.83□□□□□ -1.96
ATG3YNR007C PRP2P20095 876 aaPredicted RBP2.83□□□□□ -1.96
ATG3YNR007C MRPL8P22353 238 aa2.83□□□□□ -1.96
ATG3YNR007C PHO84P25297 587 aaKnown RBP2.83□□□□□ -1.96
ATG3YNR007C GEX1P25596 615 aa2.83□□□□□ -1.96
ATG3YNR007C ERG3P32353 365 aa2.83□□□□□ -1.96
ATG3YNR007C KAR9P32526 644 aa2.83□□□□□ -1.96
ATG3YNR007C SRB4P32569 687 aa2.83□□□□□ -1.96
ATG3YNR007C RPC25P35718 212 aa2.83□□□□□ -1.96
ATG3YNR007C PHD1P36093 366 aa2.83□□□□□ -1.96
ATG3YNR007C SPC34P36131 295 aa2.83□□□□□ -1.96
ATG3YNR007C AVT5P38176 459 aa2.83□□□□□ -1.96
ATG3YNR007C PCA1P38360 1216 aa2.83□□□□□ -1.96
ATG3YNR007C HIS2P38635 335 aa2.83□□□□□ -1.96
ATG3YNR007C SMF1P38925 575 aa2.83□□□□□ -1.96
ATG3YNR007C YEL028WP39989 153 aa2.83□□□□□ -1.96
ATG3YNR007C SGN1P40561 250 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
ATG3YNR007C GLG2P47011 380 aa2.83□□□□□ -1.96
ATG3YNR007C COG7P53195 279 aa2.83□□□□□ -1.96
ATG3YNR007C SMM1P53720 384 aaKnown RBP2.83□□□□□ -1.96
ATG3YNR007C DUG3P53871 357 aa2.83□□□□□ -1.96
ATG3YNR007C SWS2P53937 143 aa2.83□□□□□ -1.96
ATG3YNR007C EGD1Q02642 157 aaKnown RBP2.83□□□□□ -1.96
ATG3YNR007C TRM82Q03774 444 aa2.83□□□□□ -1.96
ATG3YNR007C YDR239CQ03780 787 aa2.83□□□□□ -1.96
ATG3YNR007C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
ATG3YNR007C YOR365CQ08844 703 aa2.83□□□□□ -1.96
ATG3YNR007C YOR387CQ08910 206 aa2.83□□□□□ -1.96
ATG3YNR007C SRO7Q12038 1033 aa2.83□□□□□ -1.96
ATG3YNR007C NCE102Q12207 173 aaRIP-Chip data2.83□□□□□ -1.96not detected
ATG3YNR007C GTT2Q12390 233 aa2.83□□□□□ -1.96
ATG3YNR007C RTN2Q12443 393 aa2.83□□□□□ -1.96
ATG3YNR007C YDL007C-AQ2V2Q0 85 aa2.83□□□□□ -1.96
ATG3YNR007C YBR056W-AI2HB52 66 aa2.82□□□□□ -1.96
ATG3YNR007C MET17P06106 444 aa2.82□□□□□ -1.96
ATG3YNR007C CPA1P07258 411 aaKnown RBP2.82□□□□□ -1.96
ATG3YNR007C PEP4P07267 405 aaKnown RBP2.82□□□□□ -1.96
ATG3YNR007C SLY1P22213 666 aa2.82□□□□□ -1.96
ATG3YNR007C NDI1P32340 513 aa2.82□□□□□ -1.96
ATG3YNR007C YNK1P36010 153 aaKnown RBP2.82□□□□□ -1.96
ATG3YNR007C STB6P36085 766 aa2.82□□□□□ -1.96
ATG3YNR007C TIF34P40217 347 aaKnown RBP2.82□□□□□ -1.96
ATG3YNR007C HXT14P42833 540 aa2.82□□□□□ -1.96
ATG3YNR007C BUD13P46947 266 aaPredicted RBP2.82□□□□□ -1.96
ATG3YNR007C BIR1P47134 954 aa2.82□□□□□ -1.96
ATG3YNR007C YML6P51998 286 aa2.82□□□□□ -1.96
ATG3YNR007C YGR250CP53316 781 aaKnown RBP2.82□□□□□ -1.96
ATG3YNR007C TRM112P53738 135 aaPredicted RBP2.82□□□□□ -1.96
ATG3YNR007C ALF1P53904 254 aa2.82□□□□□ -1.96
ATG3YNR007C YNL040WP53960 456 aaPredicted RBP2.82□□□□□ -1.96
ATG3YNR007C RSM10Q03201 203 aa2.82□□□□□ -1.96
ATG3YNR007C MSS11Q03825 758 aa2.82□□□□□ -1.96
ATG3YNR007C PER33Q12144 273 aa2.82□□□□□ -1.96
ATG3YNR007C YLL056CQ12177 298 aa2.82□□□□□ -1.96
ATG3YNR007C AFI1Q99222 893 aa2.82□□□□□ -1.96
ATG3YNR007C IZH4Q99393 312 aa2.82□□□□□ -1.96
ATG3YNR007C BI3Q9ZZW7 517 aa2.82□□□□□ -1.96
ATG3YNR007C BEM2P39960 2167 aaKnown RBP2.82□□□□□ -1.96
ATG3YNR007C QCR6P00127 147 aa2.81□□□□□ -1.96
ATG3YNR007C RPL31BP0C2H9 113 aaKnown RBP2.81□□□□□ -1.96
ATG3YNR007C MRS3P10566 314 aa2.81□□□□□ -1.96
ATG3YNR007C RSR1P13856 272 aa2.81□□□□□ -1.96
ATG3YNR007C UBA1P22515 1024 aaKnown RBP2.81□□□□□ -1.96
ATG3YNR007C AAT2P23542 418 aaKnown RBP2.81□□□□□ -1.96
ATG3YNR007C CLB3P24870 427 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms