RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W LYS12P40495 371 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W QRI1P43123 477 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W PCP1P53259 346 aa3.6□□□□□ -1.83
VPS27YNR006W SPP2Q02521 185 aa3.6□□□□□ -1.83
VPS27YNR006W LGE1Q02796 332 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W ASA1Q06822 443 aa3.6□□□□□ -1.83
VPS27YNR006W SMC5Q08204 1093 aa3.6□□□□□ -1.83
VPS27YNR006W LDS2Q08218 356 aa3.6□□□□□ -1.83
VPS27YNR006W RDL1Q12305 139 aaKnown RBP3.6□□□□□ -1.83
VPS27YNR006W UBA3Q99344 299 aa3.6□□□□□ -1.83
VPS27YNR006W EDE1P34216 1381 aa3.59□□□□□ -1.83
VPS27YNR006W RPN13O13563 156 aa3.59□□□□□ -1.83
VPS27YNR006W HIS4P00815 799 aaKnown RBP3.59□□□□□ -1.83
VPS27YNR006W MAS2P11914 482 aa3.59□□□□□ -1.83
VPS27YNR006W DAL81P21657 970 aa3.59□□□□□ -1.83
VPS27YNR006W MRPS5P33759 307 aa3.59□□□□□ -1.83
VPS27YNR006W COS9P36034 407 aa3.59□□□□□ -1.83
VPS27YNR006W FLO10P36170 1169 aa3.59□□□□□ -1.83
VPS27YNR006W STV1P37296 890 aa3.59□□□□□ -1.83
VPS27YNR006W BTT1P40314 149 aaPredicted RBP3.59□□□□□ -1.83
VPS27YNR006W YGR117CP53270 476 aa3.59□□□□□ -1.83
VPS27YNR006W GPI1P53306 609 aa3.59□□□□□ -1.83
VPS27YNR006W NUP100Q02629 959 aa3.59□□□□□ -1.83
VPS27YNR006W SLD5Q03406 294 aa3.59□□□□□ -1.83
VPS27YNR006W ORT1Q12375 292 aa3.59□□□□□ -1.83
VPS27YNR006W BI2P03873 423 aa3.58□□□□□ -1.84
VPS27YNR006W YCR016WP25617 290 aaKnown RBP3.58□□□□□ -1.84
VPS27YNR006W CSM1P25651 190 aa3.58□□□□□ -1.84
VPS27YNR006W RPL5P26321 297 aaKnown RBP3.58□□□□□ -1.84
VPS27YNR006W ICL1P28240 557 aaPredicted RBP3.58□□□□□ -1.84
VPS27YNR006W ITR1P30605 584 aa3.58□□□□□ -1.84
VPS27YNR006W SNC1P31109 117 aa3.58□□□□□ -1.84
VPS27YNR006W VAM7P32912 316 aa3.58□□□□□ -1.84
VPS27YNR006W PAC2P39937 518 aa3.58□□□□□ -1.84
VPS27YNR006W HMS2P47175 358 aa3.58□□□□□ -1.84
VPS27YNR006W PHB2P50085 310 aa3.58□□□□□ -1.84
VPS27YNR006W HOP2P53187 214 aa3.58□□□□□ -1.84
VPS27YNR006W ARP10Q04549 284 aa3.58□□□□□ -1.84
VPS27YNR006W SWF1Q04629 336 aa3.58□□□□□ -1.84
VPS27YNR006W GTO3Q04806 366 aa3.58□□□□□ -1.84
VPS27YNR006W BUR2Q05949 395 aa3.58□□□□□ -1.84
VPS27YNR006W PFA4Q12006 378 aa3.58□□□□□ -1.84
VPS27YNR006W BTS1Q12051 335 aa3.58□□□□□ -1.84
VPS27YNR006W YLR111WQ12528 110 aa3.58□□□□□ -1.84
VPS27YNR006W ADH2P00331 348 aaKnown RBP3.58□□□□□ -1.84
VPS27YNR006W CLN3P13365 580 aa3.58□□□□□ -1.84
VPS27YNR006W RPB8P20436 146 aa3.58□□□□□ -1.84
VPS27YNR006W UTR1P21373 530 aa3.58□□□□□ -1.84
VPS27YNR006W YCR007CP25354 239 aa3.58□□□□□ -1.84
VPS27YNR006W MMF1P40185 145 aaKnown RBP3.58□□□□□ -1.84
VPS27YNR006W SIM1P40472 476 aa3.58□□□□□ -1.84
VPS27YNR006W SCD6P45978 349 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84 RIP-Chip
VPS27YNR006W NAS6P50086 228 aa3.58□□□□□ -1.84
VPS27YNR006W YGR168CP53293 376 aa3.58□□□□□ -1.84
VPS27YNR006W RRN9P53437 365 aa3.58□□□□□ -1.84
VPS27YNR006W BIO4P53630 237 aa3.58□□□□□ -1.84
VPS27YNR006W NAT4Q04751 285 aa3.58□□□□□ -1.84
VPS27YNR006W IVY1Q04934 453 aa3.58□□□□□ -1.84
VPS27YNR006W SSK1Q07084 712 aa3.58□□□□□ -1.84
VPS27YNR006W SKI7Q08491 747 aaPredicted RBP3.58□□□□□ -1.84
VPS27YNR006W YOR029WQ12243 111 aa3.58□□□□□ -1.84
VPS27YNR006W YPR1Q12458 312 aa3.58□□□□□ -1.84
VPS27YNR006W TDH2P00358 332 aaKnown RBP3.57□□□□□ -1.84
VPS27YNR006W HEM2P05373 342 aa3.57□□□□□ -1.84
VPS27YNR006W RAD1P06777 1100 aa3.57□□□□□ -1.84
VPS27YNR006W MATALPHA1P0CY06 175 aa3.57□□□□□ -1.84
VPS27YNR006W HMLALPHA1P0CY07 175 aa3.57□□□□□ -1.84
VPS27YNR006W ARF1P11076 181 aaKnown RBP3.57□□□□□ -1.84
VPS27YNR006W PRP16P15938 1071 aaPredicted RBP3.57□□□□□ -1.84
VPS27YNR006W SPO12P17123 173 aa3.57□□□□□ -1.84
VPS27YNR006W SRB4P32569 687 aa3.57□□□□□ -1.84
VPS27YNR006W CYM1P32898 989 aa3.57□□□□□ -1.84
VPS27YNR006W YMR262WP38430 313 aa3.57□□□□□ -1.84
VPS27YNR006W SLM1P40485 686 aa3.57□□□□□ -1.84
VPS27YNR006W KAP114P53067 1004 aa3.57□□□□□ -1.84
VPS27YNR006W IZH1Q03419 316 aa3.57□□□□□ -1.84
VPS27YNR006W UBX2Q04228 584 aa3.57□□□□□ -1.84
VPS27YNR006W RTN1Q04947 295 aaKnown RBP3.57□□□□□ -1.84
VPS27YNR006W YOL075CQ08234 1294 aa3.57□□□□□ -1.84
VPS27YNR006W RAX1Q08760 435 aa3.57□□□□□ -1.84
VPS27YNR006W SRL2Q12020 392 aa3.57□□□□□ -1.84
VPS27YNR006W RGS2Q99188 309 aa3.57□□□□□ -1.84
VPS27YNR006W SSN2P38931 1420 aa3.57□□□□□ -1.84
VPS27YNR006W RAD3P06839 778 aa3.56□□□□□ -1.84
VPS27YNR006W FUS3P16892 353 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W MET16P18408 261 aaPredicted RBP3.56□□□□□ -1.84
VPS27YNR006W FAR1P21268 830 aa3.56□□□□□ -1.84
VPS27YNR006W YCP4P25349 247 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W RPS5P26783 225 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W PRO3P32263 286 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W GCG1P32656 232 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W MYO3P36006 1272 aa3.56□□□□□ -1.84
VPS27YNR006W YPK3P38070 525 aa3.56□□□□□ -1.84
VPS27YNR006W ATG7P38862 630 aa3.56□□□□□ -1.84
VPS27YNR006W YIR014WP40570 242 aa3.56□□□□□ -1.84
VPS27YNR006W YIP1P53039 248 aa3.56□□□□□ -1.84
VPS27YNR006W HXT11P54862 567 aa3.56□□□□□ -1.84
VPS27YNR006W MYO5Q04439 1219 aaKnown RBP3.56□□□□□ -1.84
VPS27YNR006W YLR283WQ05867 314 aa3.56□□□□□ -1.84
VPS27YNR006W BSP1Q06604 576 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 104.2 ms