RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	RPS1B	P23248	255 aa	Known RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	YSR3	P23501	404 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	SLM5	P25345	492 aa	Known RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	RRP7	P25368	297 aa	Predicted RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	YJU2	P28320	278 aa	Predicted RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	CTS1	P29029	562 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	PRP19	P32523	503 aa	Known RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	RPN2	P32565	945 aa	Known RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	LOT5	P34234	306 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	RRN10	P38204	145 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	STP2	P38704	541 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	NEM1	P38757	446 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	PEX18	P38855	283 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	GGC1	P38988	300 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	GDI1	P39958	451 aa	Known RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	IMD3	P50095	523 aa	Known RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	IGO1	P53897	168 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	RIM13	Q03792	727 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	RRP17	Q04031	235 aa	Predicted RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	ERB1	Q04660	807 aa	Known RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	DCI1	Q08558	271 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	YTM1	Q12024	460 aa	Predicted RBP	4.94	□□□□□ -1.62
RPA49	YNL248C	YLR125W	Q12138	136 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	TOM1	Q03280	3268 aa		4.94	□□□□□ -1.62
RPA49	YNL248C	UBR1	P19812	1950 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	STE7	P06784	515 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	ZWF1	P11412	505 aa	Known RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	KGD1	P20967	1014 aa	Known RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	YCL049C	P25577	312 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	BUD23	P25627	275 aa	Predicted RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	KKQ8	P36004	724 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	SRL3	P36167	246 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	FMP23	P38231	175 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	YHR177W	P38867	453 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	CTF8	P38877	133 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	YHR219W	P38900	624 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	MET30	P39014	640 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	CCT6	P39079	546 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	GDH3	P39708	457 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	AIM2	P39721	246 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	FAU1	P40099	211 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	RRG9	P40156	214 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	MET28	P40573	187 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	PAC11	P40960	533 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	SSY5	P47002	699 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	RAI1	P53063	387 aa	Known RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	NPY1	P53164	384 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	ERG26	P53199	349 aa	Known RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	TPS1	Q00764	495 aa	Known RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	MSC1	Q03104	513 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	SNZ1	Q03148	297 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	FIN1	Q03898	291 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	PDR8	Q06149	701 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	TSR2	Q06672	205 aa	Known RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	OPI10	Q08202	246 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	NOP12	Q08208	459 aa	Known RBP	4.93	□□□□□ -1.62
RPA49	YNL248C	REX4	Q08237	289 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	VPS68	Q12016	184 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	DIN7	Q12086	430 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	YOR114W	Q12219	294 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	SUL2	Q12325	893 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	PNS1	Q12412	539 aa		4.93	□□□□□ -1.62
RPA49	YNL248C	RPS17A	P02407	136 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	RPC40	P07703	335 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	RPS17B	P14127	136 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	CMP2	P14747	604 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	FPR1	P20081	114 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	GIT1	P25346	518 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	RNQ1	P25367	405 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	ARE1	P25628	610 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
RPA49	YNL248C	ARO7	P32178	256 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	ASF2	P32448	525 aa	Predicted RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	LYP1	P32487	611 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	MKK1	P32490	508 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	PET309	P32522	965 aa	Predicted RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	TEF4	P36008	412 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	MNN2	P38069	597 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	SCO2	P38072	301 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	TRM7	P38238	310 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	DED81	P38707	554 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	RRP3	P38712	501 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	MDM31	P38880	579 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	ALR2	P43553	858 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	YFR020W	P43600	232 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	JHD2	P47156	728 aa	Predicted RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	CWC23	P52868	283 aa	Predicted RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	PEX10	Q05568	337 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	PLB3	Q08108	686 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	NGL1	Q08213	363 aa	Known RBP	4.92	□□□□□ -1.62
RPA49	YNL248C	NFI1	Q12216	726 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	YPR064W	Q12492	139 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	SKS1	Q12505	502 aa		4.92	□□□□□ -1.62
RPA49	YNL248C	CET1	O13297	549 aa	Predicted RBP	4.91	□□□□□ -1.62
RPA49	YNL248C	MDM35	O60200	86 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	SIR3	P06701	978 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	NFT1	P0CE68	1218 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	RED1	P14291	827 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	TFS1	P14306	219 aa		4.91	□□□□□ -1.62
RPA49	YNL248C	OAC1	P32332	324 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 46 ms