RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YBR137WP38276 179 aa1.72□□□□□ -2.13
RTP1YMR185W ARP1P38696 384 aa1.72□□□□□ -2.13
RTP1YMR185W STP2P38704 541 aa1.72□□□□□ -2.13
RTP1YMR185W YHR020WP38708 688 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W RIM4P38741 713 aa1.72□□□□□ -2.13
RTP1YMR185W BIG1P38813 335 aa1.72□□□□□ -2.13
RTP1YMR185W NVJ1P38881 321 aa1.72□□□□□ -2.13
RTP1YMR185W MLH1P38920 769 aa1.72□□□□□ -2.13
RTP1YMR185W RCY1P39531 840 aa1.72□□□□□ -2.13
RTP1YMR185W PTI1P39927 425 aaPredicted RBP1.72□□□□□ -2.13
RTP1YMR185W COG3P40094 801 aa1.72□□□□□ -2.13
RTP1YMR185W RGI2P40188 164 aa1.72□□□□□ -2.13
RTP1YMR185W SOK1P40317 901 aa1.72□□□□□ -2.13
RTP1YMR185W CDC1P40986 491 aa1.72□□□□□ -2.13
RTP1YMR185W IME4P41833 600 aa1.72□□□□□ -2.13
RTP1YMR185W HAM1P47119 197 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W JHD2P47156 728 aaPredicted RBP1.72□□□□□ -2.13
RTP1YMR185W BPL1P48445 690 aaPredicted RBP1.72□□□□□ -2.13
RTP1YMR185W DIE2P50076 525 aa1.72□□□□□ -2.13
RTP1YMR185W MPC1P53157 130 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W CWC25P53854 179 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W LSM7P53905 115 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W YAT1P80235 687 aa1.72□□□□□ -2.13
RTP1YMR185W YPL068CQ02749 293 aa1.72□□□□□ -2.13
RTP1YMR185W TDA1Q03533 586 aa1.72□□□□□ -2.13
RTP1YMR185W YDR249CQ03787 373 aa1.72□□□□□ -2.13
RTP1YMR185W VTA1Q06263 330 aa1.72□□□□□ -2.13
RTP1YMR185W FEX1Q08913 375 aa1.72□□□□□ -2.13
RTP1YMR185W YPL199CQ08954 240 aa1.72□□□□□ -2.13
RTP1YMR185W ENV7Q12003 364 aa1.72□□□□□ -2.13
RTP1YMR185W RRP42Q12277 265 aaPredicted RBP1.72□□□□□ -2.13
RTP1YMR185W ARP7Q12406 477 aa1.72□□□□□ -2.13
RTP1YMR185W PSF1Q12488 208 aa1.72□□□□□ -2.13
RTP1YMR185W YCL012CQ8J0M4 134 aa1.72□□□□□ -2.13
RTP1YMR185W LAG2Q92325 660 aa1.72□□□□□ -2.13
RTP1YMR185W AFI1Q99222 893 aa1.72□□□□□ -2.13
RTP1YMR185W STT4P37297 1900 aa1.72□□□□□ -2.13
RTP1YMR185W TDH1P00360 332 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W HAP2P06774 265 aa1.72□□□□□ -2.13
RTP1YMR185W UNG1P12887 359 aa1.72□□□□□ -2.13
RTP1YMR185W AMD1P15274 810 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W CLN2P20438 545 aa1.72□□□□□ -2.13
RTP1YMR185W PRI2P20457 528 aa1.72□□□□□ -2.13
RTP1YMR185W YCK1P23291 538 aa1.72□□□□□ -2.13
RTP1YMR185W PHO84P25297 587 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W YCR099CP25657 155 aa1.72□□□□□ -2.13
RTP1YMR185W SUR1P33300 382 aa1.72□□□□□ -2.13
RTP1YMR185W TIP20P33891 701 aa1.72□□□□□ -2.13
RTP1YMR185W MTC2P34246 357 aa1.72□□□□□ -2.13
RTP1YMR185W YPT52P36018 234 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W YKR051WP36142 418 aa1.72□□□□□ -2.13
RTP1YMR185W MRPL3P36516 390 aa1.72□□□□□ -2.13
RTP1YMR185W HMT1P38074 348 aa1.72□□□□□ -2.13
RTP1YMR185W BMT2P38278 337 aa1.72□□□□□ -2.13
RTP1YMR185W RRP4P38792 359 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W AFG3P39925 761 aa1.72□□□□□ -2.13
RTP1YMR185W SWM2P40342 146 aa1.72□□□□□ -2.13
RTP1YMR185W VMA13P41807 478 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W YFL052WP43551 465 aa1.72□□□□□ -2.13
RTP1YMR185W CHA4P43634 648 aa1.72□□□□□ -2.13
RTP1YMR185W AIM22P47051 409 aa1.72□□□□□ -2.13
RTP1YMR185W AAD10P47182 288 aa1.72□□□□□ -2.13
RTP1YMR185W BIO3P50277 480 aa1.72□□□□□ -2.13
RTP1YMR185W POP6P53218 158 aa1.72□□□□□ -2.13
RTP1YMR185W VPS62P53285 467 aa1.72□□□□□ -2.13
RTP1YMR185W CWC24P53769 259 aa1.72□□□□□ -2.13
RTP1YMR185W YNL018CP53976 612 aa1.72□□□□□ -2.13
RTP1YMR185W YSA1Q01976 231 aa1.72□□□□□ -2.13
RTP1YMR185W TAF12Q03761 539 aa1.72□□□□□ -2.13
RTP1YMR185W YMR130WQ04223 302 aa1.72□□□□□ -2.13
RTP1YMR185W YMR034CQ05131 434 aaPredicted RBP1.72□□□□□ -2.13
RTP1YMR185W RQC1Q05468 723 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W ECM22Q05958 814 aaPredicted RBP1.72□□□□□ -2.13
RTP1YMR185W RIF2Q06208 395 aa1.72□□□□□ -2.13
RTP1YMR185W YLR012CQ07927 99 aa1.72□□□□□ -2.13
RTP1YMR185W DDC1Q08949 612 aa1.72□□□□□ -2.13
RTP1YMR185W YDL109CQ12103 647 aa1.72□□□□□ -2.13
RTP1YMR185W SIA1Q12212 622 aa1.72□□□□□ -2.13
RTP1YMR185W MRX4Q12467 430 aa1.72□□□□□ -2.13
RTP1YMR185W SKM1Q12469 655 aa1.72□□□□□ -2.13
RTP1YMR185W LSO2Q3E772 92 aaKnown RBP1.72□□□□□ -2.13
RTP1YMR185W SLH1P53327 1967 aaKnown RBP1.71□□□□□ -2.14
RTP1YMR185W RAS2P01120 322 aaKnown RBP1.71□□□□□ -2.14
RTP1YMR185W ARG81P05085 880 aa1.71□□□□□ -2.14
RTP1YMR185W STE3P06783 470 aa1.71□□□□□ -2.14
RTP1YMR185W MRP2P10663 115 aaPredicted RBP1.71□□□□□ -2.14
RTP1YMR185W MAS2P11914 482 aa1.71□□□□□ -2.14
RTP1YMR185W GUK1P15454 187 aaKnown RBP1.71□□□□□ -2.14
RTP1YMR185W PHO80P20052 293 aa1.71□□□□□ -2.14
RTP1YMR185W SIR1P21691 654 aa1.71□□□□□ -2.14
RTP1YMR185W HXT2P23585 541 aa1.71□□□□□ -2.14
RTP1YMR185W PRE7P23724 241 aaKnown RBP1.71□□□□□ -2.14
RTP1YMR185W CNB1P25296 175 aa1.71□□□□□ -2.14
RTP1YMR185W ARE1P25628 610 aa1.71□□□□□ -2.14
RTP1YMR185W IDH1P28834 360 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
RTP1YMR185W KRE6P32486 720 aa1.71□□□□□ -2.14
RTP1YMR185W DHR2P36009 735 aaPredicted RBP1.71□□□□□ -2.14
RTP1YMR185W FLO10P36170 1169 aa1.71□□□□□ -2.14
RTP1YMR185W APL3P38065 1025 aa1.71□□□□□ -2.14
RTP1YMR185W YBR063CP38083 404 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms