RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C ATP1P07251 545 aaKnown RBP4.27□□□□□ -1.73
PEX12YMR026C RPB5P20434 215 aa4.27□□□□□ -1.73
PEX12YMR026C DPH5P32469 300 aaPredicted RBP4.27□□□□□ -1.73
PEX12YMR026C NUP2P32499 720 aa4.27□□□□□ -1.73
PEX12YMR026C LAS1P36146 502 aaPredicted RBP4.27□□□□□ -1.73
PEX12YMR026C UTP18P40362 594 aaPredicted RBP4.27□□□□□ -1.73
PEX12YMR026C FYV8P46949 817 aaKnown RBP4.27□□□□□ -1.73
PEX12YMR026C COS1P53822 381 aa4.27□□□□□ -1.73
PEX12YMR026C EOS1P53938 366 aa4.27□□□□□ -1.73
PEX12YMR026C RIF2Q06208 395 aa4.27□□□□□ -1.73
PEX12YMR026C REX3Q12090 404 aa4.27□□□□□ -1.73
PEX12YMR026C PRS1P32895 427 aaKnown RBP4.26□□□□□ -1.73
PEX12YMR026C YFR057WP43625 151 aa4.26□□□□□ -1.73
PEX12YMR026C YMR102CQ03177 834 aa4.26□□□□□ -1.73
PEX12YMR026C SMC5Q08204 1093 aa4.26□□□□□ -1.73
PEX12YMR026C PDE2P06776 526 aa4.25□□□□□ -1.73
PEX12YMR026C POT1P27796 417 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
PEX12YMR026C MSP1P28737 362 aa4.25□□□□□ -1.73
PEX12YMR026C YEF1P32622 495 aa4.25□□□□□ -1.73
PEX12YMR026C YHK8P38776 514 aa4.25□□□□□ -1.73
PEX12YMR026C MIG3P39943 394 aa4.25□□□□□ -1.73
PEX12YMR026C MAM33P40513 266 aa4.25□□□□□ -1.73
PEX12YMR026C LCB3P47013 409 aa4.25□□□□□ -1.73
PEX12YMR026C AIM24P47127 394 aa4.25□□□□□ -1.73
PEX12YMR026C MST27P53176 234 aa4.25□□□□□ -1.73
PEX12YMR026C YGR117CP53270 476 aa4.25□□□□□ -1.73
PEX12YMR026C RTN1Q04947 295 aaKnown RBP4.25□□□□□ -1.73
PEX12YMR026C LOT6Q07923 191 aa4.25□□□□□ -1.73
PEX12YMR026C BSC6Q08280 497 aa4.25□□□□□ -1.73
PEX12YMR026C RPN5Q12250 445 aaKnown RBP4.25□□□□□ -1.73
PEX12YMR026C RNH203Q12338 110 aa4.25□□□□□ -1.73
PEX12YMR026C POM152P39685 1337 aa4.24□□□□□ -1.73
PEX12YMR026C SOD1P00445 154 aaKnown RBP4.24□□□□□ -1.73
PEX12YMR026C PCL1P24867 279 aa4.24□□□□□ -1.73
PEX12YMR026C PHO91P27514 894 aa4.24□□□□□ -1.73
PEX12YMR026C NRP1P32770 719 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
PEX12YMR026C COX13P32799 129 aa4.24□□□□□ -1.73
PEX12YMR026C QDR3P38227 689 aa4.24□□□□□ -1.73
PEX12YMR026C HAC1P41546 238 aa4.24□□□□□ -1.73
PEX12YMR026C BIR1P47134 954 aa4.24□□□□□ -1.73
PEX12YMR026C STE24P47154 453 aa4.24□□□□□ -1.73
PEX12YMR026C SPR6Q01684 191 aa4.24□□□□□ -1.73
PEX12YMR026C HAL1Q01766 294 aa4.24□□□□□ -1.73
PEX12YMR026C TDA1Q03533 586 aa4.24□□□□□ -1.73
PEX12YMR026C TSA2Q04120 196 aa4.24□□□□□ -1.73
PEX12YMR026C EAF3Q12432 401 aa4.24□□□□□ -1.73
PEX12YMR026C PIS1P06197 220 aaKnown RBP4.23□□□□□ -1.73
PEX12YMR026C SSC1P0CS90 654 aaKnown RBP4.23□□□□□ -1.73
PEX12YMR026C RPL1AP0CX43 217 aaKnown RBP4.23□□□□□ -1.73
PEX12YMR026C RPL1BP0CX44 217 aaKnown RBP4.23□□□□□ -1.73
PEX12YMR026C UTH1P36135 365 aa4.23□□□□□ -1.73
PEX12YMR026C SIF2P38262 535 aa4.23□□□□□ -1.73
PEX12YMR026C RTC2P38279 296 aa4.23□□□□□ -1.73
PEX12YMR026C ROG1P53118 685 aa4.23□□□□□ -1.73
PEX12YMR026C NDL1Q06568 189 aa4.23□□□□□ -1.73
PEX12YMR026C PAB1P04147 577 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73 RIP-Chip
PEX12YMR026C PHO84P25297 587 aaKnown RBP4.22□□□□□ -1.73
PEX12YMR026C PRR1P28708 518 aa4.22□□□□□ -1.73
PEX12YMR026C SKT5P34226 696 aa4.22□□□□□ -1.73
PEX12YMR026C RRF1P38771 230 aa4.22□□□□□ -1.73
PEX12YMR026C BNS1P50084 137 aa4.22□□□□□ -1.73
PEX12YMR026C RRP46P53256 223 aaPredicted RBP4.22□□□□□ -1.73
PEX12YMR026C ALF1P53904 254 aa4.22□□□□□ -1.73
PEX12YMR026C PRM6Q04705 352 aa4.22□□□□□ -1.73
PEX12YMR026C ECM7Q06200 448 aa4.22□□□□□ -1.73
PEX12YMR026C CMS1Q07897 291 aaKnown RBP4.22□□□□□ -1.73
PEX12YMR026C INO80P53115 1489 aa4.22□□□□□ -1.73
PEX12YMR026C OPI3P05375 206 aa4.21□□□□□ -1.74
PEX12YMR026C RPC40P07703 335 aaKnown RBP4.21□□□□□ -1.74
PEX12YMR026C SLM5P25345 492 aaKnown RBP4.21□□□□□ -1.74
PEX12YMR026C YSC83P32792 385 aa4.21□□□□□ -1.74
PEX12YMR026C UIP5P36137 443 aa4.21□□□□□ -1.74
PEX12YMR026C ATM1P40416 690 aa4.21□□□□□ -1.74
PEX12YMR026C EGT2P42835 1041 aa4.21□□□□□ -1.74
PEX12YMR026C TOS2P50078 622 aa4.21□□□□□ -1.74
PEX12YMR026C CRH1P53301 507 aa4.21□□□□□ -1.74
PEX12YMR026C SPH1Q06160 661 aa4.21□□□□□ -1.74
PEX12YMR026C RPL12AP0CX53 165 aaKnown RBP4.2□□□□□ -1.74
PEX12YMR026C RPL12BP0CX54 165 aa4.2□□□□□ -1.74
PEX12YMR026C HSP26P15992 214 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
PEX12YMR026C AAT2P23542 418 aaKnown RBP4.2□□□□□ -1.74
PEX12YMR026C ADH5P38113 351 aaKnown RBP4.2□□□□□ -1.74
PEX12YMR026C WSS1P38838 269 aa4.2□□□□□ -1.74
PEX12YMR026C OXA1P39952 402 aa4.2□□□□□ -1.74
PEX12YMR026C PCL7P40186 285 aa4.2□□□□□ -1.74
PEX12YMR026C PAC11P40960 533 aa4.2□□□□□ -1.74
PEX12YMR026C PMT5P52867 743 aa4.2□□□□□ -1.74
PEX12YMR026C YNR068CP53754 272 aa4.2□□□□□ -1.74
PEX12YMR026C YDR541CQ03049 344 aa4.2□□□□□ -1.74
PEX12YMR026C URC2Q04411 772 aa4.2□□□□□ -1.74
PEX12YMR026C YOP1Q12402 180 aa4.2□□□□□ -1.74
PEX12YMR026C SKS1Q12505 502 aa4.2□□□□□ -1.74
PEX12YMR026C SPT10P35208 640 aa4.19□□□□□ -1.74
PEX12YMR026C DAD2P36162 133 aa4.19□□□□□ -1.74
PEX12YMR026C DED81P38707 554 aaKnown RBP4.19□□□□□ -1.74
PEX12YMR026C BAT1P38891 393 aaKnown RBP4.19□□□□□ -1.74
PEX12YMR026C PTI1P39927 425 aaPredicted RBP4.19□□□□□ -1.74
PEX12YMR026C DFG10P40526 253 aa4.19□□□□□ -1.74
PEX12YMR026C ATG18P43601 500 aa4.19□□□□□ -1.74
PEX12YMR026C PML1Q07930 204 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms