RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C TY3A-GQ12173 290 aa3.67□□□□□ -1.82
USB1YLR132C RPN5Q12250 445 aaKnown RBP3.67□□□□□ -1.82
USB1YLR132C ATG34Q12292 412 aa3.67□□□□□ -1.82
USB1YLR132C AHC1Q12433 566 aa3.67□□□□□ -1.82
USB1YLR132C YCL021W-AQ96VH3 125 aa3.67□□□□□ -1.82
USB1YLR132C TY3A-IQ99219 290 aa3.67□□□□□ -1.82
USB1YLR132C SWI1P09547 1314 aa3.67□□□□□ -1.82
USB1YLR132C HHF1P02309 103 aaKnown RBP3.66□□□□□ -1.82
USB1YLR132C SLY1P22213 666 aa3.66□□□□□ -1.82
USB1YLR132C PAD1P33751 242 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
USB1YLR132C UIP5P36137 443 aa3.66□□□□□ -1.82
USB1YLR132C YHR218WP38899 603 aa3.66□□□□□ -1.82
USB1YLR132C FAA2P39518 744 aa3.66□□□□□ -1.82
USB1YLR132C YER079WP40052 210 aaKnown RBP3.66□□□□□ -1.82
USB1YLR132C GAT2P40209 560 aa3.66□□□□□ -1.82
USB1YLR132C PHB2P50085 310 aa3.66□□□□□ -1.82
USB1YLR132C IMP4P53941 290 aaKnown RBP3.66□□□□□ -1.82
USB1YLR132C MMT1Q03218 510 aa3.66□□□□□ -1.82
USB1YLR132C PPM1Q04081 328 aa3.66□□□□□ -1.82
USB1YLR132C YLR456WQ06199 204 aa3.66□□□□□ -1.82
USB1YLR132C SNX3Q08826 162 aaKnown RBP3.66□□□□□ -1.82
USB1YLR132C CDC21P06785 304 aa3.65□□□□□ -1.83
USB1YLR132C RNA14P25298 677 aaKnown RBP3.65□□□□□ -1.83
USB1YLR132C DEG1P31115 442 aaKnown RBP3.65□□□□□ -1.83
USB1YLR132C MUD1P32605 298 aaKnown RBP3.65□□□□□ -1.83
USB1YLR132C YBL059WP34224 193 aa3.65□□□□□ -1.83
USB1YLR132C TIF5P38431 405 aaKnown RBP3.65□□□□□ -1.83
USB1YLR132C YHR131CP38835 850 aa3.65□□□□□ -1.83
USB1YLR132C KRE9P39005 276 aa3.65□□□□□ -1.83
USB1YLR132C SEC28P40509 296 aaKnown RBP3.65□□□□□ -1.83
USB1YLR132C NCA3P46955 337 aa3.65□□□□□ -1.83
USB1YLR132C URH1Q04179 340 aa3.65□□□□□ -1.83
USB1YLR132C TAO3P40468 2376 aa3.65□□□□□ -1.83
USB1YLR132C DST1P07273 309 aa3.64□□□□□ -1.83
USB1YLR132C CHS1P08004 1131 aa3.64□□□□□ -1.83
USB1YLR132C ARO3P14843 370 aaKnown RBP3.64□□□□□ -1.83
USB1YLR132C CBS2P14905 389 aa3.64□□□□□ -1.83
USB1YLR132C CPR4P25334 318 aa3.64□□□□□ -1.83
USB1YLR132C HEL1P36113 551 aa3.64□□□□□ -1.83
USB1YLR132C YBR139WP38109 508 aa3.64□□□□□ -1.83
USB1YLR132C GDT1P38301 280 aaPredicted RBP3.64□□□□□ -1.83
USB1YLR132C NDT80P38830 627 aa3.64□□□□□ -1.83
USB1YLR132C AZR1P50080 613 aa3.64□□□□□ -1.83
USB1YLR132C PBA1Q05778 276 aa3.64□□□□□ -1.83
USB1YLR132C RRP9Q06506 573 aaKnown RBP3.64□□□□□ -1.83
USB1YLR132C RMD5Q12508 421 aa3.64□□□□□ -1.83
USB1YLR132C TUS1Q06412 1307 aa3.64□□□□□ -1.83
USB1YLR132C SUP35P05453 685 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C RPL6BP05739 176 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C ILV5P06168 395 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C RPL1AP0CX43 217 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C RPL1BP0CX44 217 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C SPT15P13393 240 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C NIP1P32497 812 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C SWI3P32591 825 aa3.63□□□□□ -1.83
USB1YLR132C EFM4P40516 257 aa3.63□□□□□ -1.83
USB1YLR132C YFH7P43591 353 aa3.63□□□□□ -1.83
USB1YLR132C YGL242CP53066 181 aa3.63□□□□□ -1.83
USB1YLR132C ALF1P53904 254 aa3.63□□□□□ -1.83
USB1YLR132C RPL6AQ02326 176 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C STD1Q02794 444 aa3.63□□□□□ -1.83
USB1YLR132C PEX25Q02969 394 aa3.63□□□□□ -1.83
USB1YLR132C NSE1Q07913 336 aa3.63□□□□□ -1.83
USB1YLR132C TPT1Q12272 230 aaKnown RBP3.63□□□□□ -1.83
USB1YLR132C CEX1Q12453 761 aa3.63□□□□□ -1.83
USB1YLR132C ALG1P16661 449 aa3.62□□□□□ -1.83
USB1YLR132C PHO91P27514 894 aa3.62□□□□□ -1.83
USB1YLR132C ITR1P30605 584 aa3.62□□□□□ -1.83
USB1YLR132C RXT2P38255 430 aa3.62□□□□□ -1.83
USB1YLR132C INM1P38710 295 aa3.62□□□□□ -1.83
USB1YLR132C PTH1P38876 190 aaKnown RBP3.62□□□□□ -1.83
USB1YLR132C STN1P38960 494 aa3.62□□□□□ -1.83
USB1YLR132C VAB2P40003 282 aa3.62□□□□□ -1.83
USB1YLR132C YIL067CP40514 678 aa3.62□□□□□ -1.83
USB1YLR132C YPS6P40583 537 aa3.62□□□□□ -1.83
USB1YLR132C SFH5P47008 294 aa3.62□□□□□ -1.83
USB1YLR132C TOF1P53840 1238 aa3.62□□□□□ -1.83
USB1YLR132C HER2Q03557 464 aa3.62□□□□□ -1.83
USB1YLR132C YDR341CQ05506 607 aaKnown RBP3.62□□□□□ -1.83
USB1YLR132C TSR1Q07381 788 aaKnown RBP3.62□□□□□ -1.83
USB1YLR132C SRL2Q12020 392 aa3.62□□□□□ -1.83
USB1YLR132C YDR061WQ12298 539 aa3.62□□□□□ -1.83
USB1YLR132C SNU66Q12420 587 aaPredicted RBP3.62□□□□□ -1.83
USB1YLR132C COX3P00420 269 aa3.61□□□□□ -1.83
USB1YLR132C COX13P32799 129 aa3.61□□□□□ -1.83
USB1YLR132C KAP104P38217 918 aaKnown RBP3.61□□□□□ -1.83
USB1YLR132C WSS1P38838 269 aa3.61□□□□□ -1.83
USB1YLR132C RTR1P40084 226 aaPredicted RBP3.61□□□□□ -1.83
USB1YLR132C MMF1P40185 145 aaKnown RBP3.61□□□□□ -1.83
USB1YLR132C PRM5P40476 318 aa3.61□□□□□ -1.83
USB1YLR132C BOR1P53838 576 aa3.61□□□□□ -1.83
USB1YLR132C RHO5P53879 331 aaKnown RBP3.61□□□□□ -1.83
USB1YLR132C EOS1P53938 366 aa3.61□□□□□ -1.83
USB1YLR132C HXT11P54862 567 aa3.61□□□□□ -1.83
USB1YLR132C YDR541CQ03049 344 aa3.61□□□□□ -1.83
USB1YLR132C BCH1Q05029 724 aa3.61□□□□□ -1.83
USB1YLR132C YER078W-AQ3E7A2 54 aa3.61□□□□□ -1.83
USB1YLR132C IMA3P0CW40 589 aa3.6□□□□□ -1.83
USB1YLR132C IMA4P0CW41 589 aa3.6□□□□□ -1.83
USB1YLR132C SLM5P25345 492 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms