RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W YAR1P46683 200 aa2.44□□□□□ -2.02
TRM2YKR056W YJL118WP47022 219 aa2.44□□□□□ -2.02
TRM2YKR056W LIA1P47120 325 aaKnown RBP2.44□□□□□ -2.02
TRM2YKR056W NAS6P50086 228 aa2.44□□□□□ -2.02
TRM2YKR056W SAM50P53969 484 aa2.44□□□□□ -2.02
TRM2YKR056W RLI1Q03195 608 aaKnown RBP2.44□□□□□ -2.02
TRM2YKR056W CTL1Q03220 320 aaKnown RBP2.44□□□□□ -2.02
TRM2YKR056W INP2Q03824 705 aa2.44□□□□□ -2.02
TRM2YKR056W COQ11Q05892 277 aa2.44□□□□□ -2.02
TRM2YKR056W IRC10Q08118 586 aa2.44□□□□□ -2.02
TRM2YKR056W COX2P00410 251 aa2.43□□□□□ -2.02
TRM2YKR056W ARF1P11076 181 aaKnown RBP2.43□□□□□ -2.02
TRM2YKR056W PRP16P15938 1071 aaPredicted RBP2.43□□□□□ -2.02
TRM2YKR056W RPB4P20433 221 aaPredicted RBP2.43□□□□□ -2.02
TRM2YKR056W GPI12P23797 304 aa2.43□□□□□ -2.02
TRM2YKR056W LSB5P25369 354 aa2.43□□□□□ -2.02
TRM2YKR056W COQ3P27680 312 aa2.43□□□□□ -2.02
TRM2YKR056W CWP1P28319 239 aa2.43□□□□□ -2.02
TRM2YKR056W PDR3P33200 976 aa2.43□□□□□ -2.02
TRM2YKR056W LOS1P33418 1100 aaPredicted RBP2.43□□□□□ -2.02
TRM2YKR056W SPT10P35208 640 aa2.43□□□□□ -2.02
TRM2YKR056W COS9P36034 407 aa2.43□□□□□ -2.02
TRM2YKR056W YCR041WP37265 110 aa2.43□□□□□ -2.02
TRM2YKR056W CBP4P37267 147 aa2.43□□□□□ -2.02
TRM2YKR056W PRM9P39551 298 aa2.43□□□□□ -2.02
TRM2YKR056W YER085CP40058 173 aa2.43□□□□□ -2.02
TRM2YKR056W DSE1P40077 573 aa2.43□□□□□ -2.02
TRM2YKR056W BTT1P40314 149 aaPredicted RBP2.43□□□□□ -2.02
TRM2YKR056W UTP25P40498 721 aaKnown RBP2.43□□□□□ -2.02
TRM2YKR056W RTS2P40962 232 aa2.43□□□□□ -2.02
TRM2YKR056W GUF1P46943 645 aa2.43□□□□□ -2.02
TRM2YKR056W YNL260CP53846 198 aa2.43□□□□□ -2.02
TRM2YKR056W GLO2Q05584 274 aa2.43□□□□□ -2.02
TRM2YKR056W YAP7Q08182 245 aa2.43□□□□□ -2.02
TRM2YKR056W YOL075CQ08234 1294 aa2.43□□□□□ -2.02
TRM2YKR056W GLE1Q12315 538 aa2.43□□□□□ -2.02
TRM2YKR056W GIS3Q12418 502 aa2.43□□□□□ -2.02
TRM2YKR056W ATG31Q12421 196 aa2.43□□□□□ -2.02
TRM2YKR056W SAL1D6W196 494 aa2.42□□□□□ -2.02
TRM2YKR056W SSC1P0CS90 654 aaKnown RBP2.42□□□□□ -2.02
TRM2YKR056W CDC43P18898 376 aa2.42□□□□□ -2.02
TRM2YKR056W SLM5P25345 492 aaKnown RBP2.42□□□□□ -2.02
TRM2YKR056W YCR100CP25606 316 aa2.42□□□□□ -2.02
TRM2YKR056W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
TRM2YKR056W CCT4P39078 528 aaKnown RBP2.42□□□□□ -2.02
TRM2YKR056W AIM10P39965 576 aaKnown RBP2.42□□□□□ -2.02
TRM2YKR056W SHQ1P40486 507 aaPredicted RBP2.42□□□□□ -2.02
TRM2YKR056W MSS2P40990 351 aa2.42□□□□□ -2.02
TRM2YKR056W YCH1P42937 148 aa2.42□□□□□ -2.02
TRM2YKR056W YFL040WP43562 540 aa2.42□□□□□ -2.02
TRM2YKR056W RRT5P43607 289 aa2.42□□□□□ -2.02
TRM2YKR056W LOH1P47055 219 aa2.42□□□□□ -2.02
TRM2YKR056W BIO4P53630 237 aa2.42□□□□□ -2.02
TRM2YKR056W YNR048WP53740 393 aa2.42□□□□□ -2.02
TRM2YKR056W ESBP6P53918 673 aa2.42□□□□□ -2.02
TRM2YKR056W TIM44Q01852 431 aa2.42□□□□□ -2.02
TRM2YKR056W PNG1Q02890 363 aa2.42□□□□□ -2.02
TRM2YKR056W MRP51Q02950 344 aa2.42□□□□□ -2.02
TRM2YKR056W RSN1Q03516 953 aa2.42□□□□□ -2.02
TRM2YKR056W COX20Q04935 205 aa2.42□□□□□ -2.02
TRM2YKR056W CTS2Q06350 511 aa2.42□□□□□ -2.02
TRM2YKR056W GAT3Q07928 141 aa2.42□□□□□ -2.02
TRM2YKR056W PRP46Q12417 451 aaPredicted RBP2.42□□□□□ -2.02
TRM2YKR056W ARP6Q12509 438 aa2.42□□□□□ -2.02
TRM2YKR056W DET1Q99288 334 aaKnown RBP2.42□□□□□ -2.02
TRM2YKR056W SAC3P46674 1301 aa2.42□□□□□ -2.02
TRM2YKR056W CLN3P13365 580 aa2.42□□□□□ -2.02
TRM2YKR056W MBR1P23493 339 aa2.42□□□□□ -2.02
TRM2YKR056W ECM15P35195 104 aa2.42□□□□□ -2.02
TRM2YKR056W MYO3P36006 1272 aa2.42□□□□□ -2.02
TRM2YKR056W GPX2P38143 162 aa2.42□□□□□ -2.02
TRM2YKR056W IST2P38250 946 aa2.42□□□□□ -2.02
TRM2YKR056W SHO1P40073 367 aa2.42□□□□□ -2.02
TRM2YKR056W RTR1P40084 226 aaPredicted RBP2.42□□□□□ -2.02
TRM2YKR056W MMF1P40185 145 aaKnown RBP2.42□□□□□ -2.02
TRM2YKR056W ATP23P53722 227 aa2.42□□□□□ -2.02
TRM2YKR056W PET117Q02771 107 aa2.42□□□□□ -2.02
TRM2YKR056W RSC9Q03124 581 aa2.42□□□□□ -2.02
TRM2YKR056W ATG38Q05789 226 aaKnown RBP2.42□□□□□ -2.02
TRM2YKR056W BUR2Q05949 395 aa2.42□□□□□ -2.02
TRM2YKR056W BCP1Q06338 283 aa2.42□□□□□ -2.02
TRM2YKR056W BSC6Q08280 497 aa2.42□□□□□ -2.02
TRM2YKR056W OSW1Q08692 278 aa2.42□□□□□ -2.02
TRM2YKR056W UBA3Q99344 299 aa2.42□□□□□ -2.02
TRM2YKR056W CFT1Q06632 1357 aaKnown RBP2.41□□□□□ -2.02
TRM2YKR056W RPL42AP0CX27 106 aaKnown RBP2.41□□□□□ -2.02
TRM2YKR056W RPL42BP0CX28 106 aaKnown RBP2.41□□□□□ -2.02
TRM2YKR056W YER190C-BP0CX94 160 aa2.41□□□□□ -2.02
TRM2YKR056W YEL077W-AP0CX95 160 aa2.41□□□□□ -2.02
TRM2YKR056W YGR296C-BP0CX96 160 aa2.41□□□□□ -2.02
TRM2YKR056W YPL283W-BP0CX97 160 aa2.41□□□□□ -2.02
TRM2YKR056W YPR204C-AP0CX98 160 aa2.41□□□□□ -2.02
TRM2YKR056W YPK3P38070 525 aa2.41□□□□□ -2.02
TRM2YKR056W RIM2P38127 377 aa2.41□□□□□ -2.02
TRM2YKR056W ALD5P40047 520 aaKnown RBP2.41□□□□□ -2.02
TRM2YKR056W VRG4P40107 337 aa2.41□□□□□ -2.02
TRM2YKR056W YPT11P48559 417 aa2.41□□□□□ -2.02
TRM2YKR056W YGR168CP53293 376 aa2.41□□□□□ -2.02
TRM2YKR056W SPP2Q02521 185 aa2.41□□□□□ -2.02
TRM2YKR056W ODC1Q03028 310 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms