RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W CSR2Q12734 1121 aa4.44□□□□□ -1.7
DEG1YFL001W RAD61Q99359 647 aa4.44□□□□□ -1.7
DEG1YFL001W VPS63O13549 108 aa4.43□□□□□ -1.7
DEG1YFL001W RNR2P09938 399 aaKnown RBP4.43□□□□□ -1.7
DEG1YFL001W MAS1P10507 462 aa4.43□□□□□ -1.7
DEG1YFL001W SAM1P10659 382 aaKnown RBP4.43□□□□□ -1.7
DEG1YFL001W GRR1P24814 1151 aa4.43□□□□□ -1.7
DEG1YFL001W YCR022CP25620 114 aa4.43□□□□□ -1.7
DEG1YFL001W HMX1P32339 317 aa4.43□□□□□ -1.7
DEG1YFL001W GLC7P32598 312 aaKnown RBP4.43□□□□□ -1.7
DEG1YFL001W YBR056WP38081 501 aa4.43□□□□□ -1.7
DEG1YFL001W YHR122WP38829 231 aa4.43□□□□□ -1.7
DEG1YFL001W MNN9P39107 395 aaKnown RBP4.43□□□□□ -1.7
DEG1YFL001W DIM1P41819 318 aaKnown RBP4.43□□□□□ -1.7
DEG1YFL001W RET3P53600 189 aa4.43□□□□□ -1.7
DEG1YFL001W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
DEG1YFL001W MRP51Q02950 344 aa4.43□□□□□ -1.7
DEG1YFL001W STE23Q06010 1027 aa4.43□□□□□ -1.7
DEG1YFL001W TIM18Q08749 192 aa4.43□□□□□ -1.7
DEG1YFL001W NUP188P52593 1655 aaKnown RBP4.42□□□□□ -1.7
DEG1YFL001W TEF1P02994 458 aaKnown RBP4.42□□□□□ -1.7
DEG1YFL001W ARF1P11076 181 aaKnown RBP4.42□□□□□ -1.7
DEG1YFL001W ITR1P30605 584 aa4.42□□□□□ -1.7
DEG1YFL001W MSK1P32048 576 aa4.42□□□□□ -1.7
DEG1YFL001W PDR5P33302 1511 aaKnown RBP4.42□□□□□ -1.7
DEG1YFL001W DHH1P39517 506 aaKnown RBP4.42□□□□□ -1.7
DEG1YFL001W LOC1P43586 204 aaPredicted RBP4.42□□□□□ -1.7
DEG1YFL001W RRT5P43607 289 aa4.42□□□□□ -1.7
DEG1YFL001W IKS1P47042 667 aa4.42□□□□□ -1.7
DEG1YFL001W IML1P47170 1584 aa4.42□□□□□ -1.7
DEG1YFL001W SSN8P47821 323 aa4.42□□□□□ -1.7
DEG1YFL001W AVT4P50944 713 aa4.42□□□□□ -1.7
DEG1YFL001W YLR281CQ05863 155 aa4.42□□□□□ -1.7
DEG1YFL001W CUR1Q06469 252 aa4.42□□□□□ -1.7
DEG1YFL001W GEP3Q08622 556 aa4.42□□□□□ -1.7
DEG1YFL001W MUM3Q08750 479 aa4.42□□□□□ -1.7
DEG1YFL001W PFK27Q12471 397 aaPredicted RBP4.42□□□□□ -1.7
DEG1YFL001W YIL002W-AQ3E7Z5 69 aa4.42□□□□□ -1.7
DEG1YFL001W HAP1P0CE41 1502 aa4.41□□□□□ -1.7
DEG1YFL001W RNA1P11745 407 aaKnown RBP4.41□□□□□ -1.7
DEG1YFL001W GAL3P13045 520 aa4.41□□□□□ -1.7
DEG1YFL001W TOA2P32774 122 aa4.41□□□□□ -1.7
DEG1YFL001W YKL097CP34245 136 aa4.41□□□□□ -1.7
DEG1YFL001W ASK1P35734 292 aa4.41□□□□□ -1.7
DEG1YFL001W DOA1P36037 715 aa4.41□□□□□ -1.7
DEG1YFL001W MST28P39552 234 aa4.41□□□□□ -1.7
DEG1YFL001W SHO1P40073 367 aa4.41□□□□□ -1.7
DEG1YFL001W LAM5P43560 674 aa4.41□□□□□ -1.7
DEG1YFL001W YFR018CP43599 363 aa4.41□□□□□ -1.7
DEG1YFL001W TOS2P50078 622 aa4.41□□□□□ -1.7
DEG1YFL001W POP6P53218 158 aa4.41□□□□□ -1.7
DEG1YFL001W EGD1Q02642 157 aaKnown RBP4.41□□□□□ -1.7
DEG1YFL001W YMR034CQ05131 434 aaPredicted RBP4.41□□□□□ -1.7
DEG1YFL001W HCR1Q05775 265 aaKnown RBP4.41□□□□□ -1.7
DEG1YFL001W YAP7Q08182 245 aa4.41□□□□□ -1.7
DEG1YFL001W LDS2Q08218 356 aa4.41□□□□□ -1.7
DEG1YFL001W AIM45Q12480 344 aaKnown RBP4.41□□□□□ -1.7
DEG1YFL001W DNF3Q12674 1656 aa4.4□□□□□ -1.7
DEG1YFL001W PUT4P15380 627 aa4.4□□□□□ -1.71
DEG1YFL001W HXT2P23585 541 aa4.4□□□□□ -1.71
DEG1YFL001W DBR1P24309 405 aaKnown RBP4.4□□□□□ -1.71
DEG1YFL001W TRS65P32893 560 aa4.4□□□□□ -1.71
DEG1YFL001W LOS1P33418 1100 aaPredicted RBP4.4□□□□□ -1.71
DEG1YFL001W ATP3P38077 311 aaKnown RBP4.4□□□□□ -1.71
DEG1YFL001W LCP5P40079 357 aaPredicted RBP4.4□□□□□ -1.71
DEG1YFL001W ALG8P40351 577 aa4.4□□□□□ -1.71
DEG1YFL001W ATM1P40416 690 aa4.4□□□□□ -1.71
DEG1YFL001W AIM20P40451 204 aa4.4□□□□□ -1.71
DEG1YFL001W SIM1P40472 476 aa4.4□□□□□ -1.71
DEG1YFL001W SNL1P40548 159 aa4.4□□□□□ -1.71
DEG1YFL001W YGL114WP53134 725 aa4.4□□□□□ -1.71
DEG1YFL001W DIG1Q03063 452 aaKnown RBP4.4□□□□□ -1.71
DEG1YFL001W ASA1Q06822 443 aa4.4□□□□□ -1.71
DEG1YFL001W TPT1Q12272 230 aaKnown RBP4.4□□□□□ -1.71
DEG1YFL001W VMR1P38735 1592 aa4.39□□□□□ -1.71
DEG1YFL001W PDR11P40550 1411 aa4.39□□□□□ -1.71
DEG1YFL001W HEM2P05373 342 aa4.39□□□□□ -1.71
DEG1YFL001W PTP1P25044 335 aa4.39□□□□□ -1.71
DEG1YFL001W NDC1P32500 655 aa4.39□□□□□ -1.71
DEG1YFL001W COX13P32799 129 aa4.39□□□□□ -1.71
DEG1YFL001W PTR2P32901 601 aa4.39□□□□□ -1.71
DEG1YFL001W ARC40P38328 384 aaKnown RBP4.39□□□□□ -1.71
DEG1YFL001W VPS45P38932 577 aa4.39□□□□□ -1.71
DEG1YFL001W ALP1P38971 573 aa4.39□□□□□ -1.71
DEG1YFL001W YNL146WP53906 100 aa4.39□□□□□ -1.71
DEG1YFL001W YLR297WQ05899 129 aa4.39□□□□□ -1.71
DEG1YFL001W CEX1Q12453 761 aa4.39□□□□□ -1.71
DEG1YFL001W FSH3Q99369 266 aa4.39□□□□□ -1.71
DEG1YFL001W ATP1P07251 545 aaKnown RBP4.38□□□□□ -1.71
DEG1YFL001W MRS3P10566 314 aa4.38□□□□□ -1.71
DEG1YFL001W MAS2P11914 482 aa4.38□□□□□ -1.71
DEG1YFL001W MTF1P14908 341 aaKnown RBP4.38□□□□□ -1.71
DEG1YFL001W EFB1P32471 206 aaKnown RBP4.38□□□□□ -1.71
DEG1YFL001W ATO2P32907 282 aa4.38□□□□□ -1.71
DEG1YFL001W SKT5P34226 696 aa4.38□□□□□ -1.71
DEG1YFL001W KKQ8P36004 724 aa4.38□□□□□ -1.71
DEG1YFL001W TIF5P38431 405 aaKnown RBP4.38□□□□□ -1.71
DEG1YFL001W YJL070CP40361 888 aa4.38□□□□□ -1.71
DEG1YFL001W TOS3P43637 560 aa4.38□□□□□ -1.71
DEG1YFL001W RPN14P53196 417 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms