RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W IMA3P0CW40 589 aa2.18□□□□□ -2.06
SDC1YDR469W IMA4P0CW41 589 aa2.18□□□□□ -2.06
SDC1YDR469W RPL18AP0CX49 186 aaKnown RBP2.18□□□□□ -2.06
SDC1YDR469W RPL18BP0CX50 186 aaKnown RBP2.18□□□□□ -2.06
SDC1YDR469W SEC63P14906 663 aa2.18□□□□□ -2.06
SDC1YDR469W RPB4P20433 221 aaPredicted RBP2.18□□□□□ -2.06
SDC1YDR469W DBR1P24309 405 aaKnown RBP2.18□□□□□ -2.06
SDC1YDR469W CLB2P24869 491 aa2.18□□□□□ -2.06
SDC1YDR469W RAD57P25301 460 aa2.18□□□□□ -2.06
SDC1YDR469W HXT1P32465 570 aa2.18□□□□□ -2.06
SDC1YDR469W FRE1P32791 686 aa2.18□□□□□ -2.06
SDC1YDR469W PRS1P32895 427 aaKnown RBP2.18□□□□□ -2.06
SDC1YDR469W IMP3P32899 183 aaPredicted RBP2.18□□□□□ -2.06
SDC1YDR469W CBF5P33322 483 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SDC1YDR469W ECT1P33412 323 aa2.18□□□□□ -2.06
SDC1YDR469W YPK3P38070 525 aa2.18□□□□□ -2.06
SDC1YDR469W ARP1P38696 384 aa2.18□□□□□ -2.06
SDC1YDR469W RCY1P39531 840 aa2.18□□□□□ -2.06
SDC1YDR469W YER034WP40022 185 aaKnown RBP2.18□□□□□ -2.06
SDC1YDR469W DSE1P40077 573 aa2.18□□□□□ -2.06
SDC1YDR469W RTR1P40084 226 aaPredicted RBP2.18□□□□□ -2.06
SDC1YDR469W YIR014WP40570 242 aa2.18□□□□□ -2.06
SDC1YDR469W YJR011CP47086 261 aaPredicted RBP2.18□□□□□ -2.06
SDC1YDR469W PYK2P52489 506 aaKnown RBP2.18□□□□□ -2.06
SDC1YDR469W CGR1P53188 120 aa2.18□□□□□ -2.06
SDC1YDR469W PCP1P53259 346 aa2.18□□□□□ -2.06
SDC1YDR469W YGR117CP53270 476 aa2.18□□□□□ -2.06
SDC1YDR469W SMP3Q04174 516 aa2.18□□□□□ -2.06
SDC1YDR469W YMR087WQ04299 284 aa2.18□□□□□ -2.06
SDC1YDR469W SYO1Q07395 620 aa2.18□□□□□ -2.06
SDC1YDR469W NSE1Q07913 336 aa2.18□□□□□ -2.06
SDC1YDR469W IMA2Q08295 589 aa2.18□□□□□ -2.06
SDC1YDR469W YOR365CQ08844 703 aa2.18□□□□□ -2.06
SDC1YDR469W YPR1Q12458 312 aa2.18□□□□□ -2.06
SDC1YDR469W RMD5Q12508 421 aa2.18□□□□□ -2.06
SDC1YDR469W BRR1Q99177 341 aaPredicted RBP2.18□□□□□ -2.06
SDC1YDR469W CDC36P06100 191 aaPredicted RBP2.17□□□□□ -2.06
SDC1YDR469W PEP5P12868 1029 aa2.17□□□□□ -2.06
SDC1YDR469W GLN3P18494 730 aa2.17□□□□□ -2.06
SDC1YDR469W GPI12P23797 304 aa2.17□□□□□ -2.06
SDC1YDR469W MSK1P32048 576 aa2.17□□□□□ -2.06
SDC1YDR469W SMY1P32364 656 aaKnown RBP2.17□□□□□ -2.06
SDC1YDR469W YKL097CP34245 136 aa2.17□□□□□ -2.06
SDC1YDR469W BMH2P34730 273 aaKnown RBP2.17□□□□□ -2.06
SDC1YDR469W RPC25P35718 212 aa2.17□□□□□ -2.06
SDC1YDR469W UBA4P38820 440 aa2.17□□□□□ -2.06
SDC1YDR469W MTC6P38849 526 aa2.17□□□□□ -2.06
SDC1YDR469W FET3P38993 636 aa2.17□□□□□ -2.06
SDC1YDR469W LOC1P43586 204 aaPredicted RBP2.17□□□□□ -2.06
SDC1YDR469W TRS85P46944 698 aa2.17□□□□□ -2.06
SDC1YDR469W HMS2P47175 358 aa2.17□□□□□ -2.06
SDC1YDR469W RAD17P48581 401 aa2.17□□□□□ -2.06
SDC1YDR469W PMT5P52867 743 aa2.17□□□□□ -2.06
SDC1YDR469W PKP2P53170 491 aa2.17□□□□□ -2.06
SDC1YDR469W TIM21P53220 239 aa2.17□□□□□ -2.06
SDC1YDR469W ASI1P54074 624 aa2.17□□□□□ -2.06
SDC1YDR469W APC4Q04601 652 aa2.17□□□□□ -2.06
SDC1YDR469W SNT309Q06091 175 aaPredicted RBP2.17□□□□□ -2.06
SDC1YDR469W BOP2Q06150 570 aa2.17□□□□□ -2.06
SDC1YDR469W GPN3Q06543 272 aa2.17□□□□□ -2.06
SDC1YDR469W ASA1Q06822 443 aa2.17□□□□□ -2.06
SDC1YDR469W REX4Q08237 289 aa2.17□□□□□ -2.06
SDC1YDR469W DNL4Q08387 944 aaPredicted RBP2.17□□□□□ -2.06
SDC1YDR469W RNH203Q12338 110 aa2.17□□□□□ -2.06
SDC1YDR469W RKM5Q12367 367 aa2.17□□□□□ -2.06
SDC1YDR469W PAA1Q12447 191 aaKnown RBP2.17□□□□□ -2.06
SDC1YDR469W FSH3Q99369 266 aa2.17□□□□□ -2.06
SDC1YDR469W EDE1P34216 1381 aa2.17□□□□□ -2.06
SDC1YDR469W RPL24AP04449 155 aaKnown RBP2.16□□□□□ -2.06
SDC1YDR469W RAD7P06779 565 aa2.16□□□□□ -2.06
SDC1YDR469W CLN3P13365 580 aa2.16□□□□□ -2.06
SDC1YDR469W YSR3P23501 404 aa2.16□□□□□ -2.06
SDC1YDR469W RME1P32338 300 aaKnown RBP2.16□□□□□ -2.06
SDC1YDR469W ARO4P32449 370 aaKnown RBP2.16□□□□□ -2.06
SDC1YDR469W ERG1P32476 496 aaKnown RBP2.16□□□□□ -2.06
SDC1YDR469W SKN1P33336 771 aa2.16□□□□□ -2.06
SDC1YDR469W SPT10P35208 640 aa2.16□□□□□ -2.06
SDC1YDR469W YKL071WP36086 256 aa2.16□□□□□ -2.06
SDC1YDR469W YBR056WP38081 501 aa2.16□□□□□ -2.06
SDC1YDR469W MMS21P38632 267 aa2.16□□□□□ -2.06
SDC1YDR469W LAG1P38703 411 aa2.16□□□□□ -2.06
SDC1YDR469W SIP3P38717 1229 aa2.16□□□□□ -2.06
SDC1YDR469W MMF1P40185 145 aaKnown RBP2.16□□□□□ -2.06
SDC1YDR469W SHQ1P40486 507 aaPredicted RBP2.16□□□□□ -2.06
SDC1YDR469W YGR168CP53293 376 aa2.16□□□□□ -2.06
SDC1YDR469W YNL260CP53846 198 aa2.16□□□□□ -2.06
SDC1YDR469W URC2Q04411 772 aa2.16□□□□□ -2.06
SDC1YDR469W COX20Q04935 205 aa2.16□□□□□ -2.06
SDC1YDR469W CTS2Q06350 511 aa2.16□□□□□ -2.06
SDC1YDR469W SSK1Q07084 712 aa2.16□□□□□ -2.06
SDC1YDR469W TSR1Q07381 788 aaKnown RBP2.16□□□□□ -2.06
SDC1YDR469W AAD15Q08361 143 aa2.16□□□□□ -2.06
SDC1YDR469W BUG1Q12191 341 aa2.16□□□□□ -2.06
SDC1YDR469W RUP1Q12242 671 aa2.16□□□□□ -2.06
SDC1YDR469W YDR262WQ12331 272 aa2.16□□□□□ -2.06
SDC1YDR469W AIM45Q12480 344 aaKnown RBP2.16□□□□□ -2.06
SDC1YDR469W RGS2Q99188 309 aa2.16□□□□□ -2.06
SDC1YDR469W SSK22P25390 1331 aaPredicted RBP2.16□□□□□ -2.06
SDC1YDR469W GDH1P07262 454 aaKnown RBP2.15□□□□□ -2.07
SDC1YDR469W RPL12AP0CX53 165 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms