RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C BCS1P32839 456 aa2.48□□□□□ -2.01
SSN2YDR443C RPL32P38061 130 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C EGD2P38879 174 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C YKE4P40544 346 aa2.48□□□□□ -2.01
SSN2YDR443C YFL066CP43538 392 aa2.48□□□□□ -2.01
SSN2YDR443C SNG1P46950 547 aa2.48□□□□□ -2.01
SSN2YDR443C VPS73P53142 486 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C NRG1Q03125 231 aa2.48□□□□□ -2.01
SSN2YDR443C YMR226CQ05016 267 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C FAR8Q05040 523 aa2.48□□□□□ -2.01
SSN2YDR443C NDL1Q06568 189 aa2.48□□□□□ -2.01
SSN2YDR443C RMD5Q12508 421 aa2.48□□□□□ -2.01
SSN2YDR443C PEX3P28795 441 aa2.48□□□□□ -2.01
SSN2YDR443C SOF1P33750 489 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C ELF1P36053 145 aa2.48□□□□□ -2.01
SSN2YDR443C DUG2P38149 878 aa2.48□□□□□ -2.01
SSN2YDR443C SBE22P38814 852 aa2.48□□□□□ -2.01
SSN2YDR443C PET100P38958 111 aa2.48□□□□□ -2.01
SSN2YDR443C ERG28P40030 148 aa2.48□□□□□ -2.01
SSN2YDR443C SOK1P40317 901 aa2.48□□□□□ -2.01
SSN2YDR443C YGR210CP42942 411 aa2.48□□□□□ -2.01
SSN2YDR443C MRPS35P53292 345 aa2.48□□□□□ -2.01
SSN2YDR443C CTK1Q03957 528 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C YMR087WQ04299 284 aa2.48□□□□□ -2.01
SSN2YDR443C YPL216WQ08964 1102 aa2.48□□□□□ -2.01
SSN2YDR443C ERP3Q12403 225 aa2.48□□□□□ -2.01
SSN2YDR443C NCB2Q92317 146 aa2.48□□□□□ -2.01
SSN2YDR443C HTB1P02293 131 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C HTB2P02294 131 aa2.48□□□□□ -2.01
SSN2YDR443C PMA1P05030 918 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C HPR1P17629 752 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C DBR1P24309 405 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C SOR1P35497 357 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C PRE3P38624 215 aa2.48□□□□□ -2.01
SSN2YDR443C YER130CP39959 443 aa2.48□□□□□ -2.01
SSN2YDR443C CUZ1P53899 274 aa2.48□□□□□ -2.01
SSN2YDR443C APM1Q00776 475 aaPredicted RBP2.48□□□□□ -2.01
SSN2YDR443C YVH1Q02256 364 aaKnown RBP2.48□□□□□ -2.01
SSN2YDR443C POS5Q06892 414 aa2.48□□□□□ -2.01
SSN2YDR443C SOR2Q07786 357 aa2.48□□□□□ -2.01
SSN2YDR443C BMT6Q12291 365 aa2.48□□□□□ -2.01
SSN2YDR443C YVC1Q12324 675 aa2.48□□□□□ -2.01
SSN2YDR443C YDR262WQ12331 272 aa2.48□□□□□ -2.01
SSN2YDR443C SEY1Q99287 776 aa2.48□□□□□ -2.01
SSN2YDR443C MAS2P11914 482 aa2.47□□□□□ -2.01
SSN2YDR443C POX1P13711 748 aa2.47□□□□□ -2.01
SSN2YDR443C POP5P28005 173 aa2.47□□□□□ -2.01
SSN2YDR443C TMT1P32643 299 aa2.47□□□□□ -2.01
SSN2YDR443C RGT1P32862 1170 aa2.47□□□□□ -2.01
SSN2YDR443C SPT10P35208 640 aa2.47□□□□□ -2.01
SSN2YDR443C OSH7P38755 437 aa2.47□□□□□ -2.01
SSN2YDR443C POP1P41812 875 aa2.47□□□□□ -2.01
SSN2YDR443C FAR3P46671 204 aa2.47□□□□□ -2.01
SSN2YDR443C GLG2P47011 380 aa2.47□□□□□ -2.01
SSN2YDR443C CWC23P52868 283 aaPredicted RBP2.47□□□□□ -2.01
SSN2YDR443C YIP3P53633 176 aa2.47□□□□□ -2.01
SSN2YDR443C ARO10Q06408 635 aa2.47□□□□□ -2.01
SSN2YDR443C FRE7Q12333 620 aa2.47□□□□□ -2.01
SSN2YDR443C RAD1P06777 1100 aa2.47□□□□□ -2.01
SSN2YDR443C RPB8P20436 146 aa2.47□□□□□ -2.01
SSN2YDR443C GBP2P25555 427 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SSN2YDR443C LHS1P36016 881 aa2.47□□□□□ -2.01
SSN2YDR443C DIA4P38705 446 aaPredicted RBP2.47□□□□□ -2.01
SSN2YDR443C SUR2P38992 349 aa2.47□□□□□ -2.01
SSN2YDR443C MBB1P39534 108 aa2.47□□□□□ -2.01
SSN2YDR443C GIM4P40005 111 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C THO1P40040 218 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C SPG5P42933 373 aa2.47□□□□□ -2.01
SSN2YDR443C STE24P47154 453 aa2.47□□□□□ -2.01
SSN2YDR443C YGR127WP53275 312 aa2.47□□□□□ -2.01
SSN2YDR443C RPS15Q01855 142 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C FRE5Q08908 694 aa2.47□□□□□ -2.01
SSN2YDR443C SLF1Q12034 447 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C MSH5Q12175 901 aa2.47□□□□□ -2.01
SSN2YDR443C COX2P00410 251 aa2.47□□□□□ -2.01
SSN2YDR443C RPL35AP0CX84 120 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C RPL35BP0CX85 120 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C MRP1P10662 321 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C YOX1P34161 385 aa2.47□□□□□ -2.01
SSN2YDR443C YKL162CP36052 402 aa2.47□□□□□ -2.01
SSN2YDR443C RRN10P38204 145 aa2.47□□□□□ -2.01
SSN2YDR443C SRP14P38985 146 aa2.47□□□□□ -2.01
SSN2YDR443C RPH1P39956 796 aa2.47□□□□□ -2.01
SSN2YDR443C YER121WP40076 114 aa2.47□□□□□ -2.01
SSN2YDR443C ATG27P46989 271 aa2.47□□□□□ -2.01
SSN2YDR443C DIP5P53388 608 aa2.47□□□□□ -2.01
SSN2YDR443C MRPL22P53881 309 aa2.47□□□□□ -2.01
SSN2YDR443C RSM23Q01163 450 aa2.47□□□□□ -2.01
SSN2YDR443C MRS2Q01926 470 aa2.47□□□□□ -2.01
SSN2YDR443C OST6Q03723 332 aa2.47□□□□□ -2.01
SSN2YDR443C CDC123Q05791 360 aa2.47□□□□□ -2.01
SSN2YDR443C SEC10Q06245 871 aa2.47□□□□□ -2.01
SSN2YDR443C YEH2Q07950 538 aa2.47□□□□□ -2.01
SSN2YDR443C SAM4Q08985 325 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C ATG9Q12142 997 aa2.47□□□□□ -2.01
SSN2YDR443C FSH3Q99369 266 aa2.47□□□□□ -2.01
SSN2YDR443C MLP1Q02455 1875 aaKnown RBP2.47□□□□□ -2.01
SSN2YDR443C YDR157WA0A023PZE8 133 aa2.46□□□□□ -2.02
SSN2YDR443C FAR1P21268 830 aa2.46□□□□□ -2.02
SSN2YDR443C AME1P38313 324 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms