RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W IPK1Q06667 281 aa2.53□□□□□ -2
SHS1YDL225W LOT6Q07923 191 aa2.53□□□□□ -2
SHS1YDL225W SMC5Q08204 1093 aa2.53□□□□□ -2
SHS1YDL225W TMC1Q08422 150 aaPredicted RBP2.53□□□□□ -2
SHS1YDL225W YDR061WQ12298 539 aa2.53□□□□□ -2
SHS1YDL225W YOP1Q12402 180 aa2.53□□□□□ -2
SHS1YDL225W FRE6Q12473 712 aa2.53□□□□□ -2
SHS1YDL225W PAB1P04147 577 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SHS1YDL225W PIS1P06197 220 aaKnown RBP2.53□□□□□ -2
SHS1YDL225W NAT1P12945 854 aaKnown RBP2.53□□□□□ -2
SHS1YDL225W DPH5P32469 300 aaPredicted RBP2.53□□□□□ -2
SHS1YDL225W MCR1P36060 302 aaKnown RBP2.53□□□□□ -2
SHS1YDL225W YHK8P38776 514 aa2.53□□□□□ -2
SHS1YDL225W YHR177WP38867 453 aa2.53□□□□□ -2
SHS1YDL225W HAC1P41546 238 aa2.53□□□□□ -2
SHS1YDL225W RRP46P53256 223 aaPredicted RBP2.53□□□□□ -2
SHS1YDL225W RRN9P53437 365 aa2.53□□□□□ -2
SHS1YDL225W ASA1Q06822 443 aa2.53□□□□□ -2
SHS1YDL225W LDS2Q08218 356 aa2.53□□□□□ -2
SHS1YDL225W WTM1Q12363 437 aaKnown RBP2.53□□□□□ -2
SHS1YDL225W IZH2Q12442 317 aa2.53□□□□□ -2
SHS1YDL225W SKS1Q12505 502 aa2.53□□□□□ -2
SHS1YDL225W MSI1P13712 422 aa2.52□□□□□ -2.01
SHS1YDL225W SWI3P32591 825 aa2.52□□□□□ -2.01
SHS1YDL225W GPX2P38143 162 aa2.52□□□□□ -2.01
SHS1YDL225W YSW1P38280 609 aa2.52□□□□□ -2.01
SHS1YDL225W MAM33P40513 266 aa2.52□□□□□ -2.01
SHS1YDL225W YPL107WQ02873 248 aa2.52□□□□□ -2.01
SHS1YDL225W TDA1Q03533 586 aa2.52□□□□□ -2.01
SHS1YDL225W RTN1Q04947 295 aaKnown RBP2.52□□□□□ -2.01
SHS1YDL225W RIF2Q06208 395 aa2.52□□□□□ -2.01
SHS1YDL225W RBD2Q12270 262 aa2.52□□□□□ -2.01
SHS1YDL225W SRN2Q99176 213 aa2.52□□□□□ -2.01
SHS1YDL225W DAP2P18962 818 aa2.51□□□□□ -2.01
SHS1YDL225W TOA2P32774 122 aa2.51□□□□□ -2.01
SHS1YDL225W DAD2P36162 133 aa2.51□□□□□ -2.01
SHS1YDL225W GEP4P38812 185 aa2.51□□□□□ -2.01
SHS1YDL225W YFR057WP43625 151 aa2.51□□□□□ -2.01
SHS1YDL225W SHE10P53075 577 aa2.51□□□□□ -2.01
SHS1YDL225W EOS1P53938 366 aa2.51□□□□□ -2.01
SHS1YDL225W NOP6Q07623 225 aaKnown RBP2.51□□□□□ -2.01
SHS1YDL225W AAD15Q08361 143 aa2.51□□□□□ -2.01
SHS1YDL225W EAF3Q12432 401 aa2.51□□□□□ -2.01
SHS1YDL225W RNA1P11745 407 aaKnown RBP2.5□□□□□ -2.01
SHS1YDL225W RPB5P20434 215 aa2.5□□□□□ -2.01
SHS1YDL225W APE4P38821 490 aa2.5□□□□□ -2.01
SHS1YDL225W AIM10P39965 576 aaKnown RBP2.5□□□□□ -2.01
SHS1YDL225W MST27P53176 234 aa2.5□□□□□ -2.01
SHS1YDL225W TRM112P53738 135 aaPredicted RBP2.5□□□□□ -2.01
SHS1YDL225W ALF1P53904 254 aa2.5□□□□□ -2.01
SHS1YDL225W YFH1Q07540 174 aa2.5□□□□□ -2.01
SHS1YDL225W PLP2Q12017 286 aa2.5□□□□□ -2.01
SHS1YDL225W JID1Q12350 301 aa2.5□□□□□ -2.01
SHS1YDL225W YCR024C-BQ3E7Z8 88 aa2.5□□□□□ -2.01
SHS1YDL225W FAA1P30624 700 aaKnown RBP2.5□□□□□ -2.01
SHS1YDL225W HXT1P32465 570 aa2.5□□□□□ -2.01
SHS1YDL225W VPH1P32563 840 aaKnown RBP2.5□□□□□ -2.01
SHS1YDL225W TIR2P33890 251 aa2.5□□□□□ -2.01
SHS1YDL225W ECM8P38246 354 aa2.5□□□□□ -2.01
SHS1YDL225W GDT1P38301 280 aaPredicted RBP2.5□□□□□ -2.01
SHS1YDL225W BIR1P47134 954 aa2.5□□□□□ -2.01
SHS1YDL225W BNS1P50084 137 aa2.5□□□□□ -2.01
SHS1YDL225W CRH1P53301 507 aa2.5□□□□□ -2.01
SHS1YDL225W YLR152CP54072 576 aa2.5□□□□□ -2.01
SHS1YDL225W YMR027WQ04371 470 aa2.5□□□□□ -2.01
SHS1YDL225W MHR1Q06630 226 aa2.5□□□□□ -2.01
SHS1YDL225W TFB5Q3E7C1 72 aaPredicted RBP2.5□□□□□ -2.01
SHS1YDL225W NUP2P32499 720 aa2.49□□□□□ -2.01
SHS1YDL225W RAD5P32849 1169 aaPredicted RBP2.49□□□□□ -2.01
SHS1YDL225W SPT10P35208 640 aa2.49□□□□□ -2.01
SHS1YDL225W LAS1P36146 502 aaPredicted RBP2.49□□□□□ -2.01
SHS1YDL225W MIG3P39943 394 aa2.49□□□□□ -2.01
SHS1YDL225W UTP18P40362 594 aaPredicted RBP2.49□□□□□ -2.01
SHS1YDL225W EGT2P42835 1041 aa2.49□□□□□ -2.01
SHS1YDL225W ABM1P47146 123 aa2.49□□□□□ -2.01
SHS1YDL225W TIS11P47977 285 aa2.49□□□□□ -2.01
SHS1YDL225W SHY1P53266 389 aa2.49□□□□□ -2.01
SHS1YDL225W PRM6Q04705 352 aa2.49□□□□□ -2.01
SHS1YDL225W YPR091CQ06833 770 aa2.49□□□□□ -2.01
SHS1YDL225W FCY22Q12119 530 aa2.49□□□□□ -2.01
SHS1YDL225W SCH9P11792 824 aaKnown RBP2.48□□□□□ -2.01
SHS1YDL225W PRR1P28708 518 aa2.48□□□□□ -2.01
SHS1YDL225W MSP1P28737 362 aa2.48□□□□□ -2.01
SHS1YDL225W SPR1P32603 445 aa2.48□□□□□ -2.01
SHS1YDL225W YBL028CP38202 106 aa2.48□□□□□ -2.01
SHS1YDL225W RTC2P38279 296 aa2.48□□□□□ -2.01
SHS1YDL225W ADD37Q03233 198 aa2.48□□□□□ -2.01
SHS1YDL225W CMS1Q07897 291 aaKnown RBP2.48□□□□□ -2.01
SHS1YDL225W SMF3Q12078 473 aaPredicted RBP2.48□□□□□ -2.01
SHS1YDL225W NFI1Q12216 726 aa2.48□□□□□ -2.01
SHS1YDL225W HTZ1Q12692 134 aaKnown RBP2.48□□□□□ -2.01
SHS1YDL225W UBA1P22515 1024 aaKnown RBP2.47□□□□□ -2.01
SHS1YDL225W PHO84P25297 587 aaKnown RBP2.47□□□□□ -2.01
SHS1YDL225W ANR2P36090 516 aaPredicted RBP2.47□□□□□ -2.01
SHS1YDL225W ADH5P38113 351 aaKnown RBP2.47□□□□□ -2.01
SHS1YDL225W OXA1P39952 402 aa2.47□□□□□ -2.01
SHS1YDL225W YNL208WP40159 199 aaKnown RBP2.47□□□□□ -2.01
SHS1YDL225W GAB1P41733 394 aa2.47□□□□□ -2.01
SHS1YDL225W ATG18P43601 500 aa2.47□□□□□ -2.01
SHS1YDL225W CLD1P53264 445 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms