RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W INM1P38710 295 aa1.56□□□□□ -2.16
MSH5YDL154W OST1P41543 476 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W RRP46P53256 223 aaPredicted RBP1.56□□□□□ -2.16
MSH5YDL154W BTN2P53286 410 aa1.56□□□□□ -2.16
MSH5YDL154W GPI15P53961 229 aa1.56□□□□□ -2.16
MSH5YDL154W RPM2Q02773 1202 aa1.56□□□□□ -2.16
MSH5YDL154W NDE2Q07500 545 aa1.56□□□□□ -2.16
MSH5YDL154W THP3Q12049 470 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W ATG34Q12292 412 aa1.56□□□□□ -2.16
MSH5YDL154W TFB5Q3E7C1 72 aaPredicted RBP1.56□□□□□ -2.16
MSH5YDL154W ADE4P04046 510 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W PRP16P15938 1071 aaPredicted RBP1.56□□□□□ -2.16
MSH5YDL154W ALG1P16661 449 aa1.56□□□□□ -2.16
MSH5YDL154W SPS22P25380 463 aa1.56□□□□□ -2.16
MSH5YDL154W DOA1P36037 715 aa1.56□□□□□ -2.16
MSH5YDL154W FMP46P36141 133 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W CAJ1P39101 391 aa1.56□□□□□ -2.16
MSH5YDL154W ASN2P49090 572 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W AZR1P50080 613 aa1.56□□□□□ -2.16
MSH5YDL154W SCS3P53012 380 aa1.56□□□□□ -2.16
MSH5YDL154W YNR048WP53740 393 aa1.56□□□□□ -2.16
MSH5YDL154W IBD2P53892 351 aa1.56□□□□□ -2.16
MSH5YDL154W RPN9Q04062 393 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W SKI7Q08491 747 aaPredicted RBP1.56□□□□□ -2.16
MSH5YDL154W YLR108CQ12259 485 aa1.56□□□□□ -2.16
MSH5YDL154W RRP12Q12754 1228 aaKnown RBP1.56□□□□□ -2.16
MSH5YDL154W IMA3P0CW40 589 aa1.55□□□□□ -2.16
MSH5YDL154W IMA4P0CW41 589 aa1.55□□□□□ -2.16
MSH5YDL154W NAM2P11325 894 aa1.55□□□□□ -2.16
MSH5YDL154W NAT1P12945 854 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W ATS1P31386 333 aa1.55□□□□□ -2.16
MSH5YDL154W LAS1P36146 502 aaPredicted RBP1.55□□□□□ -2.16
MSH5YDL154W MRPL4P36517 319 aa1.55□□□□□ -2.16
MSH5YDL154W RFC3P38629 340 aa1.55□□□□□ -2.16
MSH5YDL154W YAL037WP39728 267 aa1.55□□□□□ -2.16
MSH5YDL154W GAT2P40209 560 aa1.55□□□□□ -2.16
MSH5YDL154W TOM22P49334 152 aa1.55□□□□□ -2.16
MSH5YDL154W YPL107WQ02873 248 aa1.55□□□□□ -2.16
MSH5YDL154W IMA2Q08295 589 aa1.55□□□□□ -2.16
MSH5YDL154W SRN2Q99176 213 aa1.55□□□□□ -2.16
MSH5YDL154W PMD1P32634 1753 aa1.55□□□□□ -2.16
MSH5YDL154W STF1P01098 86 aa1.55□□□□□ -2.16
MSH5YDL154W HHF1P02309 103 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W ILV5P06168 395 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W MRS3P10566 314 aa1.55□□□□□ -2.16
MSH5YDL154W ARO3P14843 370 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W CTR86P25355 563 aa1.55□□□□□ -2.16
MSH5YDL154W SKN1P33336 771 aa1.55□□□□□ -2.16
MSH5YDL154W DAD2P36162 133 aa1.55□□□□□ -2.16
MSH5YDL154W ASC1P38011 319 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W NDT80P38830 627 aa1.55□□□□□ -2.16
MSH5YDL154W DHH1P39517 506 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W MST28P39552 234 aa1.55□□□□□ -2.16
MSH5YDL154W PTI1P39927 425 aaPredicted RBP1.55□□□□□ -2.16
MSH5YDL154W PAC11P40960 533 aa1.55□□□□□ -2.16
MSH5YDL154W MEH1Q02205 184 aa1.55□□□□□ -2.16
MSH5YDL154W YMR010WQ03687 405 aa1.55□□□□□ -2.16
MSH5YDL154W PRP42Q03776 544 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W RRN11Q04712 507 aa1.55□□□□□ -2.16
MSH5YDL154W HCR1Q05775 265 aaKnown RBP1.55□□□□□ -2.16
MSH5YDL154W NSE1Q07913 336 aa1.55□□□□□ -2.16
MSH5YDL154W NDD1Q08887 554 aa1.55□□□□□ -2.16
MSH5YDL154W PLP2Q12017 286 aa1.55□□□□□ -2.16
MSH5YDL154W CEX1Q12453 761 aa1.55□□□□□ -2.16
MSH5YDL154W TPK3P05986 398 aa1.54□□□□□ -2.16
MSH5YDL154W ATP1P07251 545 aaKnown RBP1.54□□□□□ -2.16
MSH5YDL154W CHS1P08004 1131 aa1.54□□□□□ -2.16
MSH5YDL154W TRX1P22217 103 aaKnown RBP1.54□□□□□ -2.16
MSH5YDL154W CHK1P38147 527 aa1.54□□□□□ -2.16
MSH5YDL154W QDR3P38227 689 aa1.54□□□□□ -2.16
MSH5YDL154W ATM1P40416 690 aa1.54□□□□□ -2.16
MSH5YDL154W YIL029CP40538 142 aa1.54□□□□□ -2.16
MSH5YDL154W SNL1P40548 159 aa1.54□□□□□ -2.16
MSH5YDL154W GCD10P41814 478 aa1.54□□□□□ -2.16
MSH5YDL154W MEP2P41948 499 aa1.54□□□□□ -2.16
MSH5YDL154W SFH5P47008 294 aa1.54□□□□□ -2.16
MSH5YDL154W YDL186WP48568 277 aa1.54□□□□□ -2.16
MSH5YDL154W MLC1P53141 149 aa1.54□□□□□ -2.16
MSH5YDL154W ADA2Q02336 434 aa1.54□□□□□ -2.16
MSH5YDL154W RRP9Q06506 573 aaKnown RBP1.54□□□□□ -2.16
MSH5YDL154W YFH1Q07540 174 aa1.54□□□□□ -2.16
MSH5YDL154W ESA1Q08649 445 aa1.54□□□□□ -2.16
MSH5YDL154W GLE1Q12315 538 aa1.54□□□□□ -2.16
MSH5YDL154W RAD61Q99359 647 aa1.54□□□□□ -2.16
MSH5YDL154W COX3P00420 269 aa1.54□□□□□ -2.16
MSH5YDL154W NFT1P0CE68 1218 aa1.54□□□□□ -2.16
MSH5YDL154W DEG1P31115 442 aaKnown RBP1.54□□□□□ -2.16
MSH5YDL154W GPI16P38875 610 aa1.54□□□□□ -2.16
MSH5YDL154W STN1P38960 494 aa1.54□□□□□ -2.16
MSH5YDL154W MSO1P53604 210 aaKnown RBP1.54□□□□□ -2.16
MSH5YDL154W TRM112P53738 135 aaPredicted RBP1.54□□□□□ -2.16
MSH5YDL154W SPR6Q01684 191 aa1.54□□□□□ -2.16
MSH5YDL154W CCE1Q03702 353 aa1.54□□□□□ -2.16
MSH5YDL154W AAD15Q08361 143 aa1.54□□□□□ -2.16
MSH5YDL154W PEX27Q08580 376 aa1.54□□□□□ -2.16
MSH5YDL154W NCA2Q12374 616 aa1.54□□□□□ -2.16
MSH5YDL154W HTZ1Q12692 134 aaKnown RBP1.54□□□□□ -2.16
MSH5YDL154W OPI3P05375 206 aa1.53□□□□□ -2.16
MSH5YDL154W CPR4P25334 318 aa1.53□□□□□ -2.16
MSH5YDL154W YCL068CP25593 260 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms