RNA–Protein interactions for RNA: YDL090C

RAM1, Transcript of Beta subunit of the CAAX farnesyltransferase (FTase), yeast

Gene RAM1, Length 1,296 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAM1	YDL090C	YHC3	P47040	408 aa		4.84	□□□□□ -1.63
RAM1	YDL090C	PNC1	P53184	216 aa	Known RBP	4.84	□□□□□ -1.63
RAM1	YDL090C	ALF1	P53904	254 aa		4.84	□□□□□ -1.63
RAM1	YDL090C	YLR281C	Q05863	155 aa		4.84	□□□□□ -1.63
RAM1	YDL090C	MUM3	Q08750	479 aa		4.84	□□□□□ -1.63
RAM1	YDL090C	GLE1	Q12315	538 aa		4.84	□□□□□ -1.63
RAM1	YDL090C	YIL002W-A	Q3E7Z5	69 aa		4.84	□□□□□ -1.63
RAM1	YDL090C	YLR419W	Q06698	1435 aa	Known RBP	4.83	□□□□□ -1.64
RAM1	YDL090C	TPK3	P05986	398 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	MRS3	P10566	314 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	COX13	P32799	129 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	PTR2	P32901	601 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	LCP5	P40079	357 aa	Predicted RBP	4.83	□□□□□ -1.64
RAM1	YDL090C	YJL070C	P40361	888 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	LYS12	P40495	371 aa	Known RBP	4.83	□□□□□ -1.64
RAM1	YDL090C	TOS3	P43637	560 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	RRN9	P53437	365 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	MRP51	Q02950	344 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	PIR3	Q03180	325 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	CAB5	Q03941	241 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	NCA2	Q12374	616 aa		4.83	□□□□□ -1.64
RAM1	YDL090C	BUD4	P47136	1447 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	ATP1	P07251	545 aa	Known RBP	4.82	□□□□□ -1.64
RAM1	YDL090C	ATS1	P31386	333 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	NDC1	P32500	655 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	BZZ1	P38822	633 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	YHR131C	P38835	850 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	ALG8	P40351	577 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	DIM1	P41819	318 aa	Known RBP	4.82	□□□□□ -1.64
RAM1	YDL090C	LAM5	P43560	674 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	GCD14	P46959	383 aa	Predicted RBP	4.82	□□□□□ -1.64
RAM1	YDL090C	AZR1	P50080	613 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	RIB4	P50861	169 aa	Predicted RBP	4.82	□□□□□ -1.64
RAM1	YDL090C	DBP6	P53734	629 aa	Known RBP	4.82	□□□□□ -1.64
RAM1	YDL090C	SMP3	Q04174	516 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	NDD1	Q08887	554 aa		4.82	□□□□□ -1.64
RAM1	YDL090C	YLL053C	P0CD98	152 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	CKI1	P20485	582 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	SLY1	P22213	666 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	YPS1	P32329	569 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	MTC4	P38335	694 aa	Known RBP	4.81	□□□□□ -1.64
RAM1	YDL090C	TIF5	P38431	405 aa	Known RBP	4.81	□□□□□ -1.64
RAM1	YDL090C	YGR117C	P53270	476 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	YPL199C	Q08954	240 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	TPT1	Q12272	230 aa	Known RBP	4.81	□□□□□ -1.64
RAM1	YDL090C	YDR262W	Q12331	272 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	YOP1	Q12402	180 aa		4.81	□□□□□ -1.64
RAM1	YDL090C	SSC1	P0CS90	654 aa	Known RBP	4.8	□□□□□ -1.64
RAM1	YDL090C	MAS2	P11914	482 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	CLN3	P13365	580 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	KKQ8	P36004	724 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	YBR137W	P38276	179 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	RTC2	P38279	296 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	ABM1	P47146	123 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	SSN8	P47821	323 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	YDL186W	P48568	277 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	SPR6	Q01684	191 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	HCR1	Q05775	265 aa	Known RBP	4.8	□□□□□ -1.64
RAM1	YDL090C	MRPL35	Q06678	367 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	GRS2	Q06817	618 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	YOR338W	Q99326	363 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	SMC4	Q12267	1418 aa		4.8	□□□□□ -1.64
RAM1	YDL090C	RPL18A	P0CX49	186 aa	Known RBP	4.79	□□□□□ -1.64
RAM1	YDL090C	RPL18B	P0CX50	186 aa	Known RBP	4.79	□□□□□ -1.64
RAM1	YDL090C	UGA1	P17649	471 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	EXG1	P23776	448 aa	Known RBP	4.79	□□□□□ -1.64
RAM1	YDL090C	ZUO1	P32527	433 aa	Known RBP	4.79	□□□□□ -1.64
RAM1	YDL090C	SKT5	P34226	696 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	PMU1	P36069	295 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	SFH5	P47008	294 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	RTT101	P47050	842 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	YGL185C	P53100	379 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	VAC14	Q06708	880 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	AYT1	Q12226	474 aa		4.79	□□□□□ -1.64
RAM1	YDL090C	PAA1	Q12447	191 aa	Known RBP	4.79	□□□□□ -1.64
RAM1	YDL090C	POM152	P39685	1337 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	CAP2	P13517	287 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	MTF1	P14908	341 aa	Known RBP	4.78	□□□□□ -1.64
RAM1	YDL090C	RNA14	P25298	677 aa	Known RBP	4.78	□□□□□ -1.64
RAM1	YDL090C	MXR2	P25566	168 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	YCL068C	P25593	260 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	EFB1	P32471	206 aa	Known RBP	4.78	□□□□□ -1.64
RAM1	YDL090C	BUD2	P33314	1104 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	FAA2	P39518	744 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	RPR2	P40571	144 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	OST1	P41543	476 aa	Known RBP	4.78	□□□□□ -1.64
RAM1	YDL090C	MEP2	P41948	499 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	COS1	P53822	381 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	SPO19	Q03029	223 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	CCE1	Q03702	353 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	BCH1	Q05029	724 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	RRG8	Q06109	277 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	KAP95	Q06142	861 aa	Known RBP	4.78	□□□□□ -1.64
RAM1	YDL090C	MMS1	Q06211	1407 aa		4.78	□□□□□ -1.64
RAM1	YDL090C	THO2	P53552	1597 aa	Known RBP	4.78	□□□□□ -1.64
RAM1	YDL090C	YPK9	Q12697	1472 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	RPL15A	P05748	204 aa	Known RBP	4.77	□□□□□ -1.65
RAM1	YDL090C	PUT3	P25502	979 aa	Predicted RBP	4.77	□□□□□ -1.65
RAM1	YDL090C	YUR1	P26725	428 aa		4.77	□□□□□ -1.65
RAM1	YDL090C	CIN8	P27895	1000 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 82.8 ms