RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C LYS1P38998 373 aaRIP-Chip data2.88□□□□□ -1.95not detected
SHG1YBR258C PCF11P39081 626 aaPredicted RBP2.88□□□□□ -1.95
SHG1YBR258C FAA2P39518 744 aa2.88□□□□□ -1.95
SHG1YBR258C WSC2P53832 503 aa2.88□□□□□ -1.95
SHG1YBR258C GPI15P53961 229 aa2.88□□□□□ -1.95
SHG1YBR258C YMR181CQ03231 154 aa2.88□□□□□ -1.95
SHG1YBR258C YMR130WQ04223 302 aa2.88□□□□□ -1.95
SHG1YBR258C SPH1Q06160 661 aa2.88□□□□□ -1.95
SHG1YBR258C TIM18Q08749 192 aa2.88□□□□□ -1.95
SHG1YBR258C PKH2Q12236 1081 aaKnown RBP2.88□□□□□ -1.95
SHG1YBR258C ERP4Q12450 207 aa2.88□□□□□ -1.95
SHG1YBR258C COX3P00420 269 aa2.87□□□□□ -1.95
SHG1YBR258C ADE4P04046 510 aaKnown RBP2.87□□□□□ -1.95
SHG1YBR258C ARG4P04076 463 aaPredicted RBP2.87□□□□□ -1.95
SHG1YBR258C TFB1P32776 642 aa2.87□□□□□ -1.95
SHG1YBR258C MRP4P32902 394 aa2.87□□□□□ -1.95
SHG1YBR258C NAT2P37293 288 aa2.87□□□□□ -1.95
SHG1YBR258C MMS4P38257 691 aa2.87□□□□□ -1.95
SHG1YBR258C LAM5P43560 674 aa2.87□□□□□ -1.95
SHG1YBR258C YPI1P43587 155 aa2.87□□□□□ -1.95
SHG1YBR258C PHO86P46956 311 aa2.87□□□□□ -1.95
SHG1YBR258C YIF1P53845 314 aaKnown RBP2.87□□□□□ -1.95
SHG1YBR258C YNL050CP53952 270 aa2.87□□□□□ -1.95
SHG1YBR258C RPN9Q04062 393 aaKnown RBP2.87□□□□□ -1.95
SHG1YBR258C URH1Q04179 340 aa2.87□□□□□ -1.95
SHG1YBR258C AIM32Q04689 311 aa2.87□□□□□ -1.95
SHG1YBR258C RRN11Q04712 507 aa2.87□□□□□ -1.95
SHG1YBR258C ESA1Q08649 445 aa2.87□□□□□ -1.95
SHG1YBR258C MUM3Q08750 479 aa2.87□□□□□ -1.95
SHG1YBR258C YPL199CQ08954 240 aa2.87□□□□□ -1.95
SHG1YBR258C YPL278CQ08990 100 aa2.87□□□□□ -1.95
SHG1YBR258C YPR022CQ12139 1133 aa2.87□□□□□ -1.95
SHG1YBR258C ISA2Q12425 185 aa2.87□□□□□ -1.95
SHG1YBR258C MTR10Q99189 972 aa2.87□□□□□ -1.95
SHG1YBR258C SPT15P13393 240 aaKnown RBP2.86□□□□□ -1.95
SHG1YBR258C RRN10P38204 145 aa2.86□□□□□ -1.95
SHG1YBR258C YBR137WP38276 179 aa2.86□□□□□ -1.95
SHG1YBR258C SER3P40054 469 aa2.86□□□□□ -1.95
SHG1YBR258C VHS2P40463 436 aa2.86□□□□□ -1.95
SHG1YBR258C YPS6P40583 537 aa2.86□□□□□ -1.95
SHG1YBR258C FRE4P53746 719 aa2.86□□□□□ -1.95
SHG1YBR258C CIK1Q01649 594 aa2.86□□□□□ -1.95
SHG1YBR258C GIP3Q03016 1276 aa2.86□□□□□ -1.95
SHG1YBR258C RSN1Q03516 953 aa2.86□□□□□ -1.95
SHG1YBR258C DIS3Q08162 1001 aaKnown RBP2.86□□□□□ -1.95
SHG1YBR258C UAF30Q08747 228 aa2.86□□□□□ -1.95
SHG1YBR258C RUP1Q12242 671 aa2.86□□□□□ -1.95
SHG1YBR258C ATG34Q12292 412 aa2.86□□□□□ -1.95
SHG1YBR258C SMC6Q12749 1114 aa2.86□□□□□ -1.95
SHG1YBR258C TY1B-AO13527 1196 aaKnown RBP2.85□□□□□ -1.95
SHG1YBR258C TEF1P02994 458 aaKnown RBP2.85□□□□□ -1.95
SHG1YBR258C SRV2P17555 526 aaKnown RBP2.85□□□□□ -1.95
SHG1YBR258C SPO7P18410 259 aa2.85□□□□□ -1.95
SHG1YBR258C PEX34P25584 144 aa2.85□□□□□ -1.95
SHG1YBR258C LTV1P34078 463 aa2.85□□□□□ -1.95
SHG1YBR258C SWH1P35845 1188 aa2.85□□□□□ -1.95
SHG1YBR258C YBR139WP38109 508 aa2.85□□□□□ -1.95
SHG1YBR258C LRP1P38801 184 aaKnown RBP2.85□□□□□ -1.95
SHG1YBR258C REE1P40893 198 aa2.85□□□□□ -1.95
SHG1YBR258C OST1P41543 476 aaKnown RBP2.85□□□□□ -1.95
SHG1YBR258C ZIM17P42844 174 aa2.85□□□□□ -1.95
SHG1YBR258C HMS2P47175 358 aa2.85□□□□□ -1.95
SHG1YBR258C OCA2P53949 197 aa2.85□□□□□ -1.95
SHG1YBR258C VPS9P54787 451 aa2.85□□□□□ -1.95
SHG1YBR258C HEL2Q05580 639 aaKnown RBP2.85□□□□□ -1.95
SHG1YBR258C REX4Q08237 289 aa2.85□□□□□ -1.95
SHG1YBR258C SRL2Q12020 392 aa2.85□□□□□ -1.95
SHG1YBR258C YIL046W-AQ3E7Z4 54 aa2.85□□□□□ -1.95
SHG1YBR258C SPO12P17123 173 aa2.84□□□□□ -1.95
SHG1YBR258C ARO2P28777 376 aaKnown RBP2.84□□□□□ -1.95
SHG1YBR258C KKQ8P36004 724 aa2.84□□□□□ -1.95
SHG1YBR258C ASC1P38011 319 aaKnown RBP2.84□□□□□ -1.95
SHG1YBR258C RRP4P38792 359 aaKnown RBP2.84□□□□□ -1.95
SHG1YBR258C YIL067CP40514 678 aa2.84□□□□□ -1.95
SHG1YBR258C YGL242CP53066 181 aa2.84□□□□□ -1.95
SHG1YBR258C YGR111WP53265 400 aa2.84□□□□□ -1.95
SHG1YBR258C HXT11P54862 567 aa2.84□□□□□ -1.95
SHG1YBR258C SCW10Q04951 389 aa2.84□□□□□ -1.95
SHG1YBR258C SNT309Q06091 175 aaPredicted RBP2.84□□□□□ -1.95
SHG1YBR258C YLR108CQ12259 485 aa2.84□□□□□ -1.95
SHG1YBR258C IPP1P00817 287 aaKnown RBP2.83□□□□□ -1.96
SHG1YBR258C RPL4AP10664 362 aaKnown RBP2.83□□□□□ -1.96
SHG1YBR258C ARO3P14843 370 aaKnown RBP2.83□□□□□ -1.96
SHG1YBR258C CPR4P25334 318 aa2.83□□□□□ -1.96
SHG1YBR258C SDH3P33421 198 aa2.83□□□□□ -1.96
SHG1YBR258C PXA2P34230 853 aa2.83□□□□□ -1.96
SHG1YBR258C RIB5P38145 238 aa2.83□□□□□ -1.96
SHG1YBR258C OLA1P38219 394 aaKnown RBP2.83□□□□□ -1.96
SHG1YBR258C STN1P38960 494 aa2.83□□□□□ -1.96
SHG1YBR258C GAT2P40209 560 aa2.83□□□□□ -1.96
SHG1YBR258C SPG5P42933 373 aa2.83□□□□□ -1.96
SHG1YBR258C RPL4BP49626 362 aaKnown RBP2.83□□□□□ -1.96
SHG1YBR258C RSC1P53236 928 aa2.83□□□□□ -1.96
SHG1YBR258C BTN2P53286 410 aa2.83□□□□□ -1.96
SHG1YBR258C ELP3Q02908 557 aaKnown RBP2.83□□□□□ -1.96
SHG1YBR258C BET5Q03630 159 aa2.83□□□□□ -1.96
SHG1YBR258C YDR341CQ05506 607 aaKnown RBP2.83□□□□□ -1.96
SHG1YBR258C PBA1Q05778 276 aa2.83□□□□□ -1.96
SHG1YBR258C YLR456WQ06199 204 aa2.83□□□□□ -1.96
SHG1YBR258C YRA1Q12159 226 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms