RNA–Protein interactions for RNA: YBR040W

FIG1, Transcript of Integral membrane protein required for efficient mating, yeast

Gene FIG1, Length 897 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG1	YBR040W	AIM33	Q04516	312 aa		3.22	□□□□□ -1.89
FIG1	YBR040W	AAD15	Q08361	143 aa		3.22	□□□□□ -1.89
FIG1	YBR040W	HNT3	Q08702	217 aa		3.22	□□□□□ -1.89
FIG1	YBR040W	YER078W-A	Q3E7A2	54 aa		3.22	□□□□□ -1.89
FIG1	YBR040W	NBL1	Q3E7Y6	73 aa		3.22	□□□□□ -1.89
FIG1	YBR040W	TPK3	P05986	398 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	RPS16A	P0CX51	143 aa	Known RBP	3.21	□□□□□ -1.9
FIG1	YBR040W	RPS16B	P0CX52	143 aa	Known RBP	3.21	□□□□□ -1.9
FIG1	YBR040W	ARF1	P11076	181 aa	Known RBP	3.21	□□□□□ -1.9
FIG1	YBR040W	DAL5	P15365	543 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	COX13	P32799	129 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	SRB2	P34162	210 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	DOA1	P36037	715 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	PCH2	P38126	564 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	YGR117C	P53270	476 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	HST1	P53685	503 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	PRM1	P53835	661 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	IBD2	P53892	351 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	RAX1	Q08760	435 aa		3.21	□□□□□ -1.9
FIG1	YBR040W	CPR4	P25334	318 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	MSK1	P32048	576 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	PHA2	P32452	334 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	MUD1	P32605	298 aa	Known RBP	3.2	□□□□□ -1.9
FIG1	YBR040W	GPX2	P38143	162 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	RRF1	P38771	230 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	SBE22	P38814	852 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	LIN1	P38852	340 aa	Predicted RBP	3.2	□□□□□ -1.9
FIG1	YBR040W	WWM1	P43582	211 aa	Known RBP	3.2	□□□□□ -1.9
FIG1	YBR040W	GPI8	P49018	411 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	YGL242C	P53066	181 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	RRP46	P53256	223 aa	Predicted RBP	3.2	□□□□□ -1.9
FIG1	YBR040W	MTM1	P53320	366 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	RET3	P53600	189 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	YRM1	Q12340	786 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	YOP1	Q12402	180 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	AHC1	Q12433	566 aa		3.2	□□□□□ -1.9
FIG1	YBR040W	POM152	P39685	1337 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	TRP1	P00912	224 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	MAS1	P10507	462 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	THR4	P16120	514 aa	Known RBP	3.19	□□□□□ -1.9
FIG1	YBR040W	HXT2	P23585	541 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	SPS22	P25380	463 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	DPH5	P32469	300 aa	Predicted RBP	3.19	□□□□□ -1.9
FIG1	YBR040W	YEF1	P32622	495 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	YBL028C	P38202	106 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	RFS1	P38234	210 aa	Known RBP	3.19	□□□□□ -1.9
FIG1	YBR040W	MEP1	P40260	492 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	SNL1	P40548	159 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	YFL067W	P43537	175 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	STE23	Q06010	1027 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	GAT3	Q07928	141 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	RTC5	Q12108	567 aa	Known RBP	3.19	□□□□□ -1.9
FIG1	YBR040W	YOR338W	Q99326	363 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	FSH3	Q99369	266 aa		3.19	□□□□□ -1.9
FIG1	YBR040W	RPS8A	P0CX39	200 aa	Known RBP	3.18	□□□□□ -1.9
FIG1	YBR040W	RPS8B	P0CX40	200 aa	Known RBP	3.18	□□□□□ -1.9
FIG1	YBR040W	GRR1	P24814	1151 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	SKT5	P34226	696 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	GEP4	P38812	185 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	ALP1	P38971	573 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	PRM5	P40476	318 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	SHE10	P53075	577 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	VPS20	Q04272	221 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	YMR310C	Q04867	317 aa	Predicted RBP	3.18	□□□□□ -1.9
FIG1	YBR040W	YLR108C	Q12259	485 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	MDY2	Q12285	212 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	SPO24	Q3E752	67 aa		3.18	□□□□□ -1.9
FIG1	YBR040W	VPS63	O13549	108 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
FIG1	YBR040W	CKI1	P20485	582 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	LDB16	P25587	256 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	ZUO1	P32527	433 aa	Known RBP	3.17	□□□□□ -1.9
FIG1	YBR040W	TIR2	P33890	251 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	SPT10	P35208	640 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	MCR1	P36060	302 aa	Known RBP	3.17	□□□□□ -1.9
FIG1	YBR040W	YDR089W	P38966	869 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	LCP5	P40079	357 aa	Predicted RBP	3.17	□□□□□ -1.9
FIG1	YBR040W	NUP116	Q02630	1113 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	ADD37	Q03233	198 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	SMP3	Q04174	516 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	RRB1	Q04225	511 aa	Known RBP	3.17	□□□□□ -1.9
FIG1	YBR040W	TSR1	Q07381	788 aa	Known RBP	3.17	□□□□□ -1.9
FIG1	YBR040W	ESA1	Q08649	445 aa		3.17	□□□□□ -1.9
FIG1	YBR040W	KAR9	P32526	644 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	YHR122W	P38829	231 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	AIM20	P40451	204 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	LYS12	P40495	371 aa	Known RBP	3.16	□□□□□ -1.9
FIG1	YBR040W	MRM2	P53123	320 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	MGR3	Q04472	501 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	ARR1	Q06596	294 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	MRPL35	Q06678	367 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	MDM36	Q06820	579 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	YOR387C	Q08910	206 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	HIF1	Q12373	385 aa		3.16	□□□□□ -1.9
FIG1	YBR040W	CLN3	P13365	580 aa		3.15	□□□□□ -1.91
FIG1	YBR040W	DEG1	P31115	442 aa	Known RBP	3.15	□□□□□ -1.91
FIG1	YBR040W	HMX1	P32339	317 aa		3.15	□□□□□ -1.91
FIG1	YBR040W	YHK8	P38776	514 aa		3.15	□□□□□ -1.91
FIG1	YBR040W	ATG7	P38862	630 aa		3.15	□□□□□ -1.91
FIG1	YBR040W	PRP39	P39682	629 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms