RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR46, Length 197 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR46snR46 DDC1Q08949 612 aa0.39□□□□□ -2.35
snR46snR46 RCN2Q12044 265 aa0.39□□□□□ -2.35
snR46snR46 HTZ1Q12692 134 aaKnown RBP0.39□□□□□ -2.35
snR46snR46 AUS1Q08409 1394 aa0.38□□□□□ -2.35
snR46snR46 EPT1P22140 391 aa0.38□□□□□ -2.35
snR46snR46 MKK1P32490 508 aa0.38□□□□□ -2.35
snR46snR46 SKG6P32900 734 aaPredicted RBP0.38□□□□□ -2.35
snR46snR46 VTC2P43585 828 aa0.38□□□□□ -2.35
snR46snR46 YJR011CP47086 261 aaPredicted RBP0.38□□□□□ -2.35
snR46snR46 YDR115WQ04598 105 aa0.38□□□□□ -2.35
snR46snR46 CDD1Q06549 142 aa0.38□□□□□ -2.35
snR46snR46 PLB3Q08108 686 aa0.38□□□□□ -2.35
snR46snR46 YBR056W-AI2HB52 66 aa0.37□□□□□ -2.35
snR46snR46 DFR1P07807 211 aaKnown RBP RIP-Chip data0.37□□□□□ -2.35not detected
snR46snR46 SPS4P09937 338 aa0.37□□□□□ -2.35
snR46snR46 SDH4P37298 181 aa0.37□□□□□ -2.35
snR46snR46 YBR056WP38081 501 aa0.37□□□□□ -2.35
snR46snR46 SMP1P38128 452 aa0.37□□□□□ -2.35
snR46snR46 AIP1P46680 615 aaKnown RBP0.37□□□□□ -2.35
snR46snR46 YJR008WP47085 338 aa0.37□□□□□ -2.35
snR46snR46 BAT2P47176 376 aaKnown RBP0.37□□□□□ -2.35
snR46snR46 BIO3P50277 480 aa0.37□□□□□ -2.35
snR46snR46 GIP3Q03016 1276 aa0.37□□□□□ -2.35
snR46snR46 ENT5Q03769 411 aaKnown RBP0.37□□□□□ -2.35
snR46snR46 TAP42Q04372 366 aa0.37□□□□□ -2.35
snR46snR46 PRM6Q04705 352 aa0.37□□□□□ -2.35
snR46snR46 CBS1P14066 229 aa0.36□□□□□ -2.35
snR46snR46 ALK2P32789 676 aaPredicted RBP0.36□□□□□ -2.35
snR46snR46 TKL2P33315 681 aa0.36□□□□□ -2.35
snR46snR46 YBL081WP38180 368 aaKnown RBP0.36□□□□□ -2.35
snR46snR46 MEP3P53390 489 aa0.36□□□□□ -2.35
snR46snR46 GPI15P53961 229 aa0.36□□□□□ -2.35
snR46snR46 YMR155WQ03795 547 aa0.36□□□□□ -2.35
snR46snR46 SRL2Q12020 392 aa0.36□□□□□ -2.35
snR46snR46 FCY22Q12119 530 aa0.36□□□□□ -2.35
snR46snR46 GPH1P06738 902 aaKnown RBP0.35□□□□□ -2.35
snR46snR46 HOM3P10869 527 aa0.35□□□□□ -2.35
snR46snR46 EXG1P23776 448 aaKnown RBP0.35□□□□□ -2.35
snR46snR46 GIT1P25346 518 aa0.35□□□□□ -2.35
snR46snR46 FRM2P37261 193 aa0.35□□□□□ -2.35
snR46snR46 ATP3P38077 311 aaKnown RBP0.35□□□□□ -2.35
snR46snR46 TWF1P53250 332 aa0.35□□□□□ -2.35
snR46snR46 SRO7Q12038 1033 aa0.35□□□□□ -2.35
snR46snR46 LDB17Q12342 491 aa0.35□□□□□ -2.35
snR46snR46 YOL085CQ99345 113 aa0.35□□□□□ -2.35
snR46snR46 SKT5P34226 696 aa0.34□□□□□ -2.36
snR46snR46 ECM8P38246 354 aa0.34□□□□□ -2.36
snR46snR46 RRT13P40042 185 aa0.34□□□□□ -2.36
snR46snR46 YMR018WQ04364 514 aa0.34□□□□□ -2.36
snR46snR46 LDS2Q08218 356 aa0.34□□□□□ -2.36
snR46snR46 FRE8Q12209 686 aa0.34□□□□□ -2.36
snR46snR46 RIP1P08067 215 aa0.33□□□□□ -2.36
snR46snR46 RPS23AP0CX29 145 aaKnown RBP0.33□□□□□ -2.36
snR46snR46 RPS23BP0CX30 145 aa0.33□□□□□ -2.36
snR46snR46 CAP2P13517 287 aa0.33□□□□□ -2.36
snR46snR46 SEC63P14906 663 aa0.33□□□□□ -2.36
snR46snR46 CKA2P19454 339 aa0.33□□□□□ -2.36
snR46snR46 PMT1P33775 817 aa0.33□□□□□ -2.36
snR46snR46 VHS2P40463 436 aa0.33□□□□□ -2.36
snR46snR46 RPS0BP46654 252 aaKnown RBP0.33□□□□□ -2.36
snR46snR46 YGL088WP53151 121 aa0.33□□□□□ -2.36
snR46snR46 YLR177WQ06251 628 aa0.33□□□□□ -2.36
snR46snR46 ASA1Q06822 443 aa0.33□□□□□ -2.36
snR46snR46 DBF4P32325 704 aa0.32□□□□□ -2.36
snR46snR46 RAD5P32849 1169 aaPredicted RBP0.32□□□□□ -2.36
snR46snR46 CMC1P36064 111 aa0.32□□□□□ -2.36
snR46snR46 YKR032WP36127 104 aa0.32□□□□□ -2.36
snR46snR46 RMD8P43620 662 aa0.32□□□□□ -2.36
snR46snR46 MRX6P48564 524 aa0.32□□□□□ -2.36
snR46snR46 VMS1Q04311 632 aaKnown RBP0.32□□□□□ -2.36
snR46snR46 YDL199CQ12407 687 aa0.32□□□□□ -2.36
snR46snR46 NUM1Q00402 2748 aa0.31□□□□□ -2.36
snR46snR46 PPH22P23595 377 aa0.31□□□□□ -2.36
snR46snR46 RHB1P25378 209 aa0.31□□□□□ -2.36
snR46snR46 MIG1P27705 504 aa0.31□□□□□ -2.36
snR46snR46 DBP7P36120 742 aaKnown RBP0.31□□□□□ -2.36
snR46snR46 YBR241CP38142 488 aa0.31□□□□□ -2.36
snR46snR46 YAL037WP39728 267 aa0.31□□□□□ -2.36
snR46snR46 HXT14P42833 540 aa0.31□□□□□ -2.36
snR46snR46 MNN5P46982 586 aa0.31□□□□□ -2.36
snR46snR46 SEH1P53011 349 aaKnown RBP0.31□□□□□ -2.36
snR46snR46 RRP46P53256 223 aaPredicted RBP0.31□□□□□ -2.36
snR46snR46 VTI1Q04338 217 aa0.31□□□□□ -2.36
snR46snR46 NCA2Q12374 616 aa0.31□□□□□ -2.36
snR46snR46 YCR024C-BQ3E7Z8 88 aa0.31□□□□□ -2.36
snR46snR46 FLO11P08640 1367 aa0.31□□□□□ -2.36
snR46snR46 APE3P37302 537 aaKnown RBP0.3□□□□□ -2.36
snR46snR46 RFC3P38629 340 aa0.3□□□□□ -2.36
snR46snR46 VMA13P41807 478 aaKnown RBP0.3□□□□□ -2.36
snR46snR46 TAF12Q03761 539 aa0.3□□□□□ -2.36
snR46snR46 YDL114WQ07530 308 aa0.3□□□□□ -2.36
snR46snR46 HMS1Q12398 434 aa0.3□□□□□ -2.36
snR46snR46 SPS19P32573 292 aaKnown RBP0.29□□□□□ -2.36
snR46snR46 TOA1P32773 286 aa0.29□□□□□ -2.36
snR46snR46 SEC66P33754 206 aa0.29□□□□□ -2.36
snR46snR46 SOR1P35497 357 aaKnown RBP0.29□□□□□ -2.36
snR46snR46 NOP4P37838 685 aaKnown RBP0.29□□□□□ -2.36
snR46snR46 RRP4P38792 359 aaKnown RBP0.29□□□□□ -2.36
snR46snR46 TOS3P43637 560 aa0.29□□□□□ -2.36
snR46snR46 TRF5P48561 642 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms