RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B RPS23BP0CX30 145 aa0.16□□□□□ -2.38
snR39BsnR39B CMK2P22517 447 aa0.16□□□□□ -2.38
snR39BsnR39B YCL068CP25593 260 aa0.16□□□□□ -2.38
snR39BsnR39B MIG1P27705 504 aa0.16□□□□□ -2.38
snR39BsnR39B RAD14P28519 371 aa0.16□□□□□ -2.38
snR39BsnR39B SKG6P32900 734 aaPredicted RBP0.16□□□□□ -2.38
snR39BsnR39B RFC3P38629 340 aa0.16□□□□□ -2.38
snR39BsnR39B VHS2P40463 436 aa0.16□□□□□ -2.38
snR39BsnR39B YGR250CP53316 781 aaKnown RBP0.16□□□□□ -2.38
snR39BsnR39B GIR2Q03768 265 aaPredicted RBP0.16□□□□□ -2.38
snR39BsnR39B RLP24Q07915 199 aaKnown RBP0.16□□□□□ -2.38
snR39BsnR39B SRL2Q12020 392 aa0.16□□□□□ -2.38
snR39BsnR39B NMD4Q12129 218 aa0.16□□□□□ -2.38
snR39BsnR39B MCT1Q12283 360 aa0.16□□□□□ -2.38
snR39BsnR39B NOP58Q12499 511 aaKnown RBP0.16□□□□□ -2.38
snR39BsnR39B GIT1P25346 518 aa0.15□□□□□ -2.39
snR39BsnR39B SPB1P25582 841 aaPredicted RBP0.15□□□□□ -2.39
snR39BsnR39B AFG1P32317 509 aa0.15□□□□□ -2.39
snR39BsnR39B RAD23P32628 398 aaKnown RBP0.15□□□□□ -2.39
snR39BsnR39B LSM12P38828 187 aaKnown RBP0.15□□□□□ -2.39
snR39BsnR39B SAP185P40856 1058 aa0.15□□□□□ -2.39
snR39BsnR39B PHB2P50085 310 aa0.15□□□□□ -2.39
snR39BsnR39B DUO1P53168 247 aaKnown RBP0.15□□□□□ -2.39
snR39BsnR39B YGR021WP53212 290 aa0.15□□□□□ -2.39
snR39BsnR39B YGR066CP53242 292 aa0.15□□□□□ -2.39
snR39BsnR39B OAZ1Q02803 292 aa0.15□□□□□ -2.39
snR39BsnR39B YDL114WQ07530 308 aa0.15□□□□□ -2.39
snR39BsnR39B YOR283WQ12040 230 aaKnown RBP0.15□□□□□ -2.39
snR39BsnR39B YJR112W-AQ3E743 109 aa0.15□□□□□ -2.39
snR39BsnR39B RIP1P08067 215 aa0.14□□□□□ -2.39
snR39BsnR39B CDC16P09798 840 aa0.14□□□□□ -2.39
snR39BsnR39B RRN3P36070 627 aa0.14□□□□□ -2.39
snR39BsnR39B FLC2P39719 783 aa0.14□□□□□ -2.39
snR39BsnR39B RBG1P39729 369 aa0.14□□□□□ -2.39
snR39BsnR39B LYS14P40971 790 aa0.14□□□□□ -2.39
snR39BsnR39B YGR149WP48236 432 aa0.14□□□□□ -2.39
snR39BsnR39B HSH155P49955 971 aaKnown RBP0.14□□□□□ -2.39
snR39BsnR39B MEP3P53390 489 aa0.14□□□□□ -2.39
snR39BsnR39B GPI15P53961 229 aa0.14□□□□□ -2.39
snR39BsnR39B YPL113CQ02961 396 aa0.14□□□□□ -2.39
snR39BsnR39B CCE1Q03702 353 aa0.14□□□□□ -2.39
snR39BsnR39B ENT5Q03769 411 aaKnown RBP0.14□□□□□ -2.39
snR39BsnR39B VMS1Q04311 632 aaKnown RBP0.14□□□□□ -2.39
snR39BsnR39B YOR376WQ08900 122 aa0.14□□□□□ -2.39
snR39BsnR39B YBR126W-AQ8TGU7 68 aa0.14□□□□□ -2.39
snR39BsnR39B IDH2P28241 369 aaKnown RBP0.13□□□□□ -2.39
snR39BsnR39B DBF4P32325 704 aa0.13□□□□□ -2.39
snR39BsnR39B SPS19P32573 292 aaKnown RBP0.13□□□□□ -2.39
snR39BsnR39B PTH2P34222 208 aa0.13□□□□□ -2.39
snR39BsnR39B DBP7P36120 742 aaKnown RBP0.13□□□□□ -2.39
snR39BsnR39B ECM14P38836 430 aa0.13□□□□□ -2.39
snR39BsnR39B YAL037WP39728 267 aa0.13□□□□□ -2.39
snR39BsnR39B VTC2P43585 828 aa0.13□□□□□ -2.39
snR39BsnR39B KEG1P43614 200 aa0.13□□□□□ -2.39
snR39BsnR39B BUD13P46947 266 aaPredicted RBP0.13□□□□□ -2.39
snR39BsnR39B YJR011CP47086 261 aaPredicted RBP0.13□□□□□ -2.39
snR39BsnR39B TRF5P48561 642 aaKnown RBP0.13□□□□□ -2.39
snR39BsnR39B GIP3Q03016 1276 aa0.13□□□□□ -2.39
snR39BsnR39B YHC1Q05900 231 aaKnown RBP0.13□□□□□ -2.39
snR39BsnR39B MDM30Q05930 598 aa0.13□□□□□ -2.39
snR39BsnR39B SRO7Q12038 1033 aa0.13□□□□□ -2.39
snR39BsnR39B SEC39Q12745 709 aa0.13□□□□□ -2.39
snR39BsnR39B GPH1P06738 902 aaKnown RBP0.12□□□□□ -2.39
snR39BsnR39B SEC53P07283 254 aaKnown RBP0.12□□□□□ -2.39
snR39BsnR39B SPS4P09937 338 aa0.12□□□□□ -2.39
snR39BsnR39B HOM3P10869 527 aa0.12□□□□□ -2.39
snR39BsnR39B HPR1P17629 752 aaKnown RBP0.12□□□□□ -2.39
snR39BsnR39B EXG1P23776 448 aaKnown RBP0.12□□□□□ -2.39
snR39BsnR39B TOA1P32773 286 aa0.12□□□□□ -2.39
snR39BsnR39B RAD5P32849 1169 aaPredicted RBP0.12□□□□□ -2.39
snR39BsnR39B SHE3P38272 425 aaKnown RBP0.12□□□□□ -2.39
snR39BsnR39B WSC4P38739 605 aa0.12□□□□□ -2.39
snR39BsnR39B RRP4P38792 359 aaKnown RBP0.12□□□□□ -2.39
snR39BsnR39B HEM14P40012 539 aa0.12□□□□□ -2.39
snR39BsnR39B PCL7P40186 285 aa0.12□□□□□ -2.39
snR39BsnR39B UFE1P41834 346 aa0.12□□□□□ -2.39
snR39BsnR39B SHE4P51534 789 aa0.12□□□□□ -2.39
snR39BsnR39B YDR115WQ04598 105 aa0.12□□□□□ -2.39
snR39BsnR39B ASA1Q06822 443 aa0.12□□□□□ -2.39
snR39BsnR39B CLP1Q08685 445 aaPredicted RBP0.12□□□□□ -2.39
snR39BsnR39B HUA2Q12134 243 aa0.12□□□□□ -2.39
snR39BsnR39B HMS1Q12398 434 aa0.12□□□□□ -2.39
snR39BsnR39B CAP2P13517 287 aa0.11□□□□□ -2.39
snR39BsnR39B GEX1P25596 615 aa0.11□□□□□ -2.39
snR39BsnR39B ATP3P38077 311 aaKnown RBP0.11□□□□□ -2.39
snR39BsnR39B VHC1P38329 1120 aa0.11□□□□□ -2.39
snR39BsnR39B ASP1P38986 381 aaPredicted RBP0.11□□□□□ -2.39
snR39BsnR39B RRT13P40042 185 aa0.11□□□□□ -2.39
snR39BsnR39B IES5P40060 125 aa0.11□□□□□ -2.39
snR39BsnR39B TAF12Q03761 539 aa0.11□□□□□ -2.39
snR39BsnR39B SNT309Q06091 175 aaPredicted RBP0.11□□□□□ -2.39
snR39BsnR39B FCY22Q12119 530 aa0.11□□□□□ -2.39
snR39BsnR39B HIF1Q12373 385 aa0.11□□□□□ -2.39
snR39BsnR39B YDL199CQ12407 687 aa0.11□□□□□ -2.39
snR39BsnR39B STE2D6VTK4 431 aa0.1□□□□□ -2.39
snR39BsnR39B DFR1P07807 211 aaKnown RBP RIP-Chip data0.1□□□□□ -2.39not detected
snR39BsnR39B TFS1P14306 219 aa0.1□□□□□ -2.39
snR39BsnR39B CUP2P15315 225 aa0.1□□□□□ -2.39
snR39BsnR39B FUN26P31381 517 aa0.1□□□□□ -2.39
snR39BsnR39B SEC66P33754 206 aa0.1□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms